Miyakogusa Predicted Gene

Lj4g3v2928720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2928720.1 Non Characterized Hit- tr|D7TW20|D7TW20_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52.21,3e-19,seg,NULL; coiled-coil,NULL; FAMILY NOT NAMED,NULL;
Remorin_C,Remorin, C-terminal,CUFF.51869.1
         (180 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g097320.1 | carboxy-terminal region remorin | HC | chr8:40...   166   7e-42
Medtr8g097320.2 | carboxy-terminal region remorin | HC | chr8:40...   161   3e-40
Medtr5g010590.1 | carboxy-terminal region remorin | HC | chr5:28...   124   6e-29
Medtr1g100647.1 | carboxy-terminal region remorin | HC | chr1:45...   119   2e-27
Medtr7g076730.1 | carboxy-terminal region remorin | HC | chr7:28...   112   2e-25
Medtr8g031370.1 | carboxy-terminal region remorin | HC | chr8:11...   105   2e-23
Medtr5g010590.2 | carboxy-terminal region remorin | HC | chr5:28...    77   1e-14
Medtr1g052560.1 | carboxy-terminal region remorin | HC | chr1:21...    53   2e-07
Medtr7g091990.1 | carboxy-terminal region remorin | HC | chr7:36...    52   4e-07
Medtr8g079482.1 | carboxy-terminal region remorin | HC | chr8:34...    48   6e-06
Medtr8g079482.2 | carboxy-terminal region remorin | HC | chr8:34...    48   6e-06

>Medtr8g097320.1 | carboxy-terminal region remorin | HC |
           chr8:40772400-40769635 | 20130731
          Length = 205

 Score =  166 bits (421), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 92/150 (61%), Positives = 112/150 (74%), Gaps = 2/150 (1%)

Query: 31  LSEVLKLKESQNAESSNSTLTITRQGSTTNPSYPLDQDLDAETDNINTSIDRDAVLARVE 90
            S  L+ KE  N  +S+S +   R  S    S  +DQ   A TD  + S+DRDAVLARVE
Sbjct: 28  FSYFLEEKEPGNEGTSSSVVKQERVVSDHATS-SVDQTTAAGTDTKD-SVDRDAVLARVE 85

Query: 91  SQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIEENMDRKKADYV 150
           SQKRLALIKAWEENEKTKV+N+AYK+Q AVD+WE  KKAS +AK K IE  +DRKK++YV
Sbjct: 86  SQKRLALIKAWEENEKTKVENRAYKMQSAVDLWEDDKKASIEAKFKGIEVKLDRKKSEYV 145

Query: 151 EIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           E+MQNKI E H+ A+EKKA+IEAQKGEE+L
Sbjct: 146 EVMQNKIGEIHKSAEEKKAMIEAQKGEEIL 175


>Medtr8g097320.2 | carboxy-terminal region remorin | HC |
           chr8:40772237-40769635 | 20130731
          Length = 208

 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 5/153 (3%)

Query: 31  LSEVLKLKESQNAESSNSTLTITRQGSTTNPSYPLDQDLDAETDNINTSIDR---DAVLA 87
            S  L+ KE  N  +S+S +   R  S    S  +DQ   A TD  + S+DR   DAVLA
Sbjct: 28  FSYFLEEKEPGNEGTSSSVVKQERVVSDHATS-SVDQTTAAGTDTKD-SVDRVPLDAVLA 85

Query: 88  RVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIEENMDRKKA 147
           RVESQKRLALIKAWEENEKTKV+N+AYK+Q AVD+WE  KKAS +AK K IE  +DRKK+
Sbjct: 86  RVESQKRLALIKAWEENEKTKVENRAYKMQSAVDLWEDDKKASIEAKFKGIEVKLDRKKS 145

Query: 148 DYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           +YVE+MQNKI E H+ A+EKKA+IEAQKGEE+L
Sbjct: 146 EYVEVMQNKIGEIHKSAEEKKAMIEAQKGEEIL 178


>Medtr5g010590.1 | carboxy-terminal region remorin | HC |
           chr5:2869609-2871761 | 20130731
          Length = 209

 Score =  124 bits (310), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 58/99 (58%), Positives = 84/99 (84%)

Query: 82  RDAVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIEEN 141
           RDA LA++ ++KRLALIKAWEE+EKTK +N+AYK Q +V +WE++KK+S +A++KK EEN
Sbjct: 86  RDAGLAKIVAEKRLALIKAWEESEKTKAENRAYKKQSSVGLWEESKKSSIEAQLKKFEEN 145

Query: 142 MDRKKADYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           ++RKK +YV  M+N++AE H+ A+EK+A++EAQK EE L
Sbjct: 146 LERKKVEYVSKMKNELAEIHQYAEEKRAIVEAQKREECL 184


>Medtr1g100647.1 | carboxy-terminal region remorin | HC |
           chr1:45590830-45593341 | 20130731
          Length = 209

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/102 (54%), Positives = 83/102 (81%)

Query: 79  SIDRDAVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKI 138
           SIDRDAVL RV ++KRL+LIKAWEE+EK+K +NKA +    +  WE +KKA+ +A+++K+
Sbjct: 85  SIDRDAVLTRVATEKRLSLIKAWEESEKSKAENKAQRRLSTITAWENSKKAAKEAELRKL 144

Query: 139 EENMDRKKADYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           EE +++KK +Y E ++NKIA  H+ A+EKKA+IEA+KGE++L
Sbjct: 145 EEQLEKKKGEYAEKLKNKIAALHKAAEEKKAMIEAKKGEDLL 186


>Medtr7g076730.1 | carboxy-terminal region remorin | HC |
           chr7:28942331-28943740 | 20130731
          Length = 133

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/110 (54%), Positives = 83/110 (75%), Gaps = 1/110 (0%)

Query: 71  AETDNINTSIDRDAVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKAS 130
           AET  + +    D VLA V  +K+L  +KAWEE+EKTK DNKA+K   ++  WE +KKA+
Sbjct: 2   AET-QVKSESSSDIVLAEVTKEKKLCYVKAWEESEKTKADNKAHKHISSIAAWEDSKKAA 60

Query: 131 TQAKIKKIEENMDRKKADYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
            +A++KKIEE ++RKKA Y EIM+NKIA  H+ A+EK+A+IEA++GEEVL
Sbjct: 61  LEAELKKIEEQLERKKARYGEIMRNKIALVHKEAEEKRAMIEAKRGEEVL 110


>Medtr8g031370.1 | carboxy-terminal region remorin | HC |
           chr8:11753967-11749805 | 20130731
          Length = 200

 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 79/104 (75%)

Query: 77  NTSIDRDAVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIK 136
           N S+DRD  LA +  +KRL+ +KAWE++EKTK +NKA K    V  WE +KKA+ +A+++
Sbjct: 74  NASLDRDIALAEIGKEKRLSNVKAWEDSEKTKAENKAQKQLSTVAAWENSKKAALEAQLR 133

Query: 137 KIEENMDRKKADYVEIMQNKIAETHRLADEKKALIEAQKGEEVL 180
           KIEE +++KKA+Y E ++NK+A  H+ A+EK+A++EAQ+ E +L
Sbjct: 134 KIEEQLEKKKAEYGEKIKNKVAMVHKQAEEKRAIVEAQRAEAIL 177


>Medtr5g010590.2 | carboxy-terminal region remorin | HC |
           chr5:2869609-2871940 | 20130731
          Length = 194

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 50/58 (86%)

Query: 82  RDAVLARVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIE 139
           RDA LA++ ++KRLALIKAWEE+EKTK +N+AYK Q +V +WE++KK+S +A++KK E
Sbjct: 86  RDAGLAKIVAEKRLALIKAWEESEKTKAENRAYKKQSSVGLWEESKKSSIEAQLKKFE 143


>Medtr1g052560.1 | carboxy-terminal region remorin | HC |
           chr1:21429641-21426963 | 20130731
          Length = 273

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 8/151 (5%)

Query: 31  LSEVLKLKESQNAESSNSTLTITRQGSTTNPS--YPLDQDLDAETDNINTSIDRDAVLAR 88
              +L+++E++  E +N    +    +  NP   +P      + T  IN     +  + R
Sbjct: 106 FHNLLRIRENELMEETNPLAIV----ADNNPLELHPSSSSSSSST--INGHHQSEVSVQR 159

Query: 89  VESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIEENMDRKKAD 148
           V+ ++  + I AW+  +  KV+N+  +    ++ WE  +     + + K+E  ++ K+A 
Sbjct: 160 VKKEEVESKIAAWQNAKVAKVNNRFKREDAVINGWENEQVQKANSWMMKVERKLEEKRAK 219

Query: 149 YVEIMQNKIAETHRLADEKKALIEAQKGEEV 179
            +E MQN +A+ HR A EK+A  EA++G ++
Sbjct: 220 ALEKMQNDVAKAHRKAQEKRASAEAKRGTKI 250


>Medtr7g091990.1 | carboxy-terminal region remorin | HC |
           chr7:36403616-36400654 | 20130731
          Length = 279

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 55/92 (59%)

Query: 88  RVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIEENMDRKKA 147
           RV+ ++  A I AW+  +  K++N+  +    ++ WE  +     + +KK+E  ++ K+A
Sbjct: 165 RVKKEEVDAKISAWQNAKVAKINNRFKRDDAVINGWESEQVQKATSWMKKVERKLEEKRA 224

Query: 148 DYVEIMQNKIAETHRLADEKKALIEAQKGEEV 179
             +E  QNKIA+  R A+E+KA  EA++G +V
Sbjct: 225 RALEKTQNKIAKARRKAEERKASAEAKRGTKV 256


>Medtr8g079482.1 | carboxy-terminal region remorin | HC |
           chr8:34063857-34067628 | 20130731
          Length = 528

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 88  RVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIEENMDRKKA 147
           R+E +KR AL   WEE EK+K   +  + +  +  WE  +KA  +A++++ E  +++ +A
Sbjct: 412 RIEFEKRAAL---WEEAEKSKHTARLKREEIQIQAWESQQKAKLEAEMRRTEAKVEQMRA 468

Query: 148 DYVEIMQNKIAETHRLADEKKALIEAQKGEEV 179
                M  KIA   + +DEK+A  EA+K  E 
Sbjct: 469 QTHAKMVKKIAMARQRSDEKRAQAEARKNREA 500


>Medtr8g079482.2 | carboxy-terminal region remorin | HC |
           chr8:34063857-34067628 | 20130731
          Length = 438

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 3/92 (3%)

Query: 88  RVESQKRLALIKAWEENEKTKVDNKAYKLQCAVDMWEKTKKASTQAKIKKIEENMDRKKA 147
           R+E +KR AL   WEE EK+K   +  + +  +  WE  +KA  +A++++ E  +++ +A
Sbjct: 322 RIEFEKRAAL---WEEAEKSKHTARLKREEIQIQAWESQQKAKLEAEMRRTEAKVEQMRA 378

Query: 148 DYVEIMQNKIAETHRLADEKKALIEAQKGEEV 179
                M  KIA   + +DEK+A  EA+K  E 
Sbjct: 379 QTHAKMVKKIAMARQRSDEKRAQAEARKNREA 410