Miyakogusa Predicted Gene

Lj4g3v2917570.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2917570.1 Non Characterized Hit- tr|G7J7V6|G7J7V6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,39.42,8e-17,UNCHARACTERIZED,NULL; seg,NULL;
SNARE_assoc,SNARE associated Golgi
protein,NODE_40950_length_705_cov_63.422695.path2.1
         (191 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g011420.1 | SNARE associated family protein | HC | chr5:32...   251   3e-67
Medtr4g101920.1 | SNARE associated family protein | HC | chr4:42...   244   3e-65
Medtr2g028450.1 | SNARE associated family protein | HC | chr2:10...   187   5e-48
Medtr3g064097.1 | SNARE associated family protein | HC | chr3:28...    92   4e-19
Medtr4g032670.1 | SNARE associated family protein | HC | chr4:11...    55   3e-08

>Medtr5g011420.1 | SNARE associated family protein | HC |
           chr5:3274387-3272739 | 20130731
          Length = 318

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 116/177 (65%), Positives = 137/177 (77%)

Query: 2   LFGSIALFXXXXXXXXXXMWMAGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRKIEGW 61
           +F SIALF          MW+AGM FGY  GF L++SAA+VGVSLPFF   +FH KIE W
Sbjct: 128 VFASIALFPTIFLPSSPSMWVAGMTFGYFFGFFLVMSAASVGVSLPFFTSKMFHHKIEEW 187

Query: 62  LEKYPKKASVLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLVG 121
           L++YPK+ASVLR AG GNWFHQF+A+ LIR+SPFPY+++NYCA AT V+YGPYLCGSL G
Sbjct: 188 LDQYPKEASVLRSAGGGNWFHQFRAVALIRVSPFPYMIYNYCATATNVQYGPYLCGSLAG 247

Query: 122 MVPEVLVSLYTGILIRTLANASHKEHTISVVQIVLNVVGLCITVATVYFITVYAKRR 178
           M+PEV+ S+YTGILIR LAN SHK H +S  QI  NVVG CI VAT  F T+YAKRR
Sbjct: 248 MLPEVIASIYTGILIRALANVSHKTHGLSAPQIAFNVVGFCIAVATTIFFTIYAKRR 304


>Medtr4g101920.1 | SNARE associated family protein | HC |
           chr4:42167255-42163145 | 20130731
          Length = 313

 Score =  244 bits (623), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 118/178 (66%), Positives = 145/178 (81%)

Query: 1   MLFGSIALFXXXXXXXXXXMWMAGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRKIEG 60
           +LF S+A+F          MW+AG+  GY  GF+LII+AAA+GVSLPF IGSIFH KIEG
Sbjct: 122 LLFASVAIFPTILLPSTPSMWVAGVTLGYGFGFLLIITAAAIGVSLPFIIGSIFHHKIEG 181

Query: 61  WLEKYPKKASVLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLV 120
           WLEKYPKKAS+L+ AG GNWFHQF+A+ LIRISPFPY++FNYCAVAT VKYGPY+ GSLV
Sbjct: 182 WLEKYPKKASILKSAGAGNWFHQFRAVALIRISPFPYMVFNYCAVATNVKYGPYIIGSLV 241

Query: 121 GMVPEVLVSLYTGILIRTLANASHKEHTISVVQIVLNVVGLCITVATVYFITVYAKRR 178
           GMVPE+ V++YTGILI+TLA+AS++  ++S  QI+LN +G C+TV T   ITVYAKRR
Sbjct: 242 GMVPEIFVAIYTGILIKTLADASNERQSLSAQQIILNALGFCLTVVTTVIITVYAKRR 299


>Medtr2g028450.1 | SNARE associated family protein | HC |
           chr2:10555701-10558445 | 20130731
          Length = 373

 Score =  187 bits (475), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 120/177 (67%)

Query: 1   MLFGSIALFXXXXXXXXXXMWMAGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHRKIEG 60
           +L  S+ALF          MW+AGM+FGY LGF++I+    +G+ LP+ IG  F  +I  
Sbjct: 146 VLIASLALFPVLLIPSGPSMWLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLKFRDRIHQ 205

Query: 61  WLEKYPKKASVLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLV 120
           WLEK+P+ A+++R AGEG+WFHQFQ + L R SPFPY +FNY  V T +K+ PY CGS+ 
Sbjct: 206 WLEKWPQNAAMIRLAGEGSWFHQFQVVALFRTSPFPYTIFNYAVVVTDMKFWPYFCGSVA 265

Query: 121 GMVPEVLVSLYTGILIRTLANASHKEHTISVVQIVLNVVGLCITVATVYFITVYAKR 177
           GMVPE  + +Y+G LI++LA+A +  H ++ V+IV N++   I V T+   TVYAKR
Sbjct: 266 GMVPEAFIYIYSGRLIKSLADAQYGRHHMTTVEIVYNIISFIIAVITIVGFTVYAKR 322


>Medtr3g064097.1 | SNARE associated family protein | HC |
           chr3:28829690-28829424 | 20130731
          Length = 80

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 54/80 (67%)

Query: 71  VLRFAGEGNWFHQFQAITLIRISPFPYILFNYCAVATTVKYGPYLCGSLVGMVPEVLVSL 130
           ++R AGEG+WFHQFQ + L R SPFPY +FNY  V T +K+ PY CGS+ GMVPE  + +
Sbjct: 1   MIRLAGEGSWFHQFQVVALFRTSPFPYTIFNYAVVVTDMKFWPYFCGSVAGMVPEAFIYI 60

Query: 131 YTGILIRTLANASHKEHTIS 150
           Y+ + + +L ++ +     S
Sbjct: 61  YSFVFLFSLYDSLNSSRMQS 80


>Medtr4g032670.1 | SNARE associated family protein | HC |
           chr4:11261721-11269691 | 20130731
          Length = 331

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 6/104 (5%)

Query: 23  AGMLFGYVLGFMLIISAAAVGVSLPFFIGSIFHR-KIEGWLEKYPKKASVLRFAGEGNWF 81
           AG+LFG + G +++  +  V  S+ F I   F R +I   +E   K  ++ +  GE    
Sbjct: 171 AGLLFGSLTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGE---- 226

Query: 82  HQFQAITLIRISPF-PYILFNYCAVATTVKYGPYLCGSLVGMVP 124
           + F+ +TL+R+SP  P+ L NY    T+VK+ PY+ GS +GM+P
Sbjct: 227 NGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFLPYVLGSWLGMLP 270