Miyakogusa Predicted Gene

Lj4g3v2882180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2882180.1 Non Characterized Hit- tr|G7J3B7|G7J3B7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,42.97,0.000000000001,seg,NULL; coiled-coil,NULL,CUFF.51823.1
         (356 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099760.1 | hypothetical protein | HC | chr8:40361523-4036...   103   2e-22
Medtr3g098800.1 | hypothetical protein | LC | chr3:45273408-4527...    80   4e-15

>Medtr8g099760.1 | hypothetical protein | HC |
           chr8:40361523-40360020 | 20130731
          Length = 314

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/137 (50%), Positives = 90/137 (65%), Gaps = 6/137 (4%)

Query: 1   MGSGNSRLNATEGGGVLPPKVRSTLLNRFEEFRKRRNGGAGTISKKQLLKDAEETEDEHS 60
           MGSGNSRLN+ EG  V   K+RSTL++RFEEFRKRRN GA T+SKK+LLKD+E+  D  S
Sbjct: 1   MGSGNSRLNSAEGESV-SNKIRSTLISRFEEFRKRRNAGA-TLSKKELLKDSEQG-DGGS 57

Query: 61  QISHESETEDNKVLVLKETQPIKEETVVQVIATEKLSRVVPMPNPECEIEEQKDQVNQNT 120
            IS  S  E N+  V K +   KEE  V +   EK+SRVVPM N EC+  E++++  +  
Sbjct: 58  IISQTSFREINETEVRKNSVSTKEEPTVPLATKEKISRVVPMENSECKTTEEEEKKKEKM 117

Query: 121 DSNKG---KTEQVTDPN 134
           + NK    + E+V D N
Sbjct: 118 NINKDIDLREEKVVDSN 134



 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 58/118 (49%), Gaps = 4/118 (3%)

Query: 241 GRFLCPGSPSFRIYYIEAEKRK--DQEECKSPTIVMHHQKXXXXXXXXXXXXXXXXXXXN 298
           GRFL  GSPSFRIY  EA+ RK  ++EECKS  IV+ HQK                   N
Sbjct: 199 GRFLYQGSPSFRIYCTEADTRKEEEEEECKSSNIVVMHQKSRSADSVVQSVAARKTKISN 258

Query: 299 DALEVLDVEIEPIAXXXXXXXXXXXXXXXXXXXXSCYYPMSTCTGNDRAHLIAAKAGH 356
           +  E+  VE E I                     SCY+P+S+CTG  R+ L+AAKA +
Sbjct: 259 EVPEI--VESETITKRKGNKNKKFGKVRTLLKVKSCYHPISSCTGEHRSRLVAAKAAN 314


>Medtr3g098800.1 | hypothetical protein | LC |
           chr3:45273408-45272085 | 20130731
          Length = 291

 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 11/128 (8%)

Query: 1   MGSGNSRLNATEGGGVLPPKVRSTLLNRFEEFRKRRNGGA-GTISKKQLLKDAEETEDEH 59
           MG  NSR     G  VLP ++R  L  R EEFRKRRN    G +SKK+LLKD     D+ 
Sbjct: 1   MGGNNSRSVNPNGEDVLPARLRPLLRQRIEEFRKRRNARRDGAVSKKELLKDDAGNNDDP 60

Query: 60  SQISHESETEDNKVLVLKETQPIKEE-TVVQVIATEKLSRVVPMPNPECEIEEQKDQVNQ 118
           S   +E         VL+ETQ  +EE T V  ++ EKLS+V P+P  EC IEE++ + ++
Sbjct: 61  SSNVNE---------VLEETQQHEEEKTTVHAVSVEKLSQVAPLPVSECGIEEEEHKGSK 111

Query: 119 NTDSNKGK 126
           + D  K K
Sbjct: 112 DHDLEKCK 119