Miyakogusa Predicted Gene

Lj4g3v2882160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2882160.1 tr|H1ZNA3|H1ZNA3_LOTJA GAGA-binding
transcriptional activator OS=Lotus japonicus GN=BBR/BPC3 PE=2
SV,99.37,0,GAGA_bind,GAGA binding-like; coiled-coil,NULL; seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.51820.1
         (317 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099780.1 | GAGA-binding transcriptional activator BBR/BPC...   458   e-129
Medtr8g099780.2 | GAGA-binding transcriptional activator BBR/BPC...   458   e-129
Medtr1g023660.2 | GAGA-binding transcriptional activator BBR/BPC...   266   3e-71
Medtr1g023660.1 | GAGA-binding transcriptional activator BBR/BPC...   266   3e-71

>Medtr8g099780.1 | GAGA-binding transcriptional activator
           BBR/BPC6-like protein | HC | chr8:40350058-40354207 |
           20130731
          Length = 312

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/317 (68%), Positives = 248/317 (78%), Gaps = 5/317 (1%)

Query: 1   MGDDRQHENGRHKMEYYRGARSPWDMDHQHQVKEPNALVMNKKLRSIMAERQXXXXXXXX 60
           M DDRQ+ENGRHKM+YYRGA S W++D QHQ+KE NALVMNKK+RSIMAERQ        
Sbjct: 1   MDDDRQYENGRHKMDYYRGAHSLWNVDPQHQIKEQNALVMNKKIRSIMAERQAALLELEL 60

Query: 61  XXXISEKNXXXXXXXXXXXXXXXXXXXXDNALLQRDNALAALQNRNSAVNFPFSGGSQRG 120
              ISEKN                    DNALL+RDNALAALQ+RNS  NFPF+GG QRG
Sbjct: 61  EAAISEKNEALAARDVALRQRDEALAQRDNALLERDNALAALQSRNSTANFPFNGGIQRG 120

Query: 121 SKWIHHSPNHLSDITETSYITKDMIIRDASPVTIVTPEDVRSHQAKRTKESKVINXXXXX 180
           SK +HHS NH+S++TE +Y T D+IIRDASPVT++T EDV+SH  KRTKE+K        
Sbjct: 121 SKRMHHSSNHISNMTEAAYSTTDIIIRDASPVTVITSEDVKSHLTKRTKENKA-----SQ 175

Query: 181 XXXXXXXLGEDLNKKASSEGTKFRSEWDSQDVGLNLIAFDETIMPVPVCTCTGIARQCYK 240
                  +GEDLN+KA SEGTK +SEWD QDVGLN IAFDET+MPVPVCTCTG+ RQCYK
Sbjct: 176 TPTKIKKMGEDLNRKAYSEGTKIKSEWDRQDVGLNSIAFDETVMPVPVCTCTGVPRQCYK 235

Query: 241 WGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSKLASEGHDISIPLD 300
           WGNGGWQSSCCTTTLS++PLPQLPNKRHARIGGRKMSG+VF RLLS+ ASEGHD+SIPLD
Sbjct: 236 WGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGNVFRRLLSRFASEGHDLSIPLD 295

Query: 301 LKNYWARHGTNRYITIK 317
           LK+YWARHGTNRYITIK
Sbjct: 296 LKDYWARHGTNRYITIK 312


>Medtr8g099780.2 | GAGA-binding transcriptional activator
           BBR/BPC6-like protein | HC | chr8:40351570-40354207 |
           20130731
          Length = 312

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/317 (68%), Positives = 248/317 (78%), Gaps = 5/317 (1%)

Query: 1   MGDDRQHENGRHKMEYYRGARSPWDMDHQHQVKEPNALVMNKKLRSIMAERQXXXXXXXX 60
           M DDRQ+ENGRHKM+YYRGA S W++D QHQ+KE NALVMNKK+RSIMAERQ        
Sbjct: 1   MDDDRQYENGRHKMDYYRGAHSLWNVDPQHQIKEQNALVMNKKIRSIMAERQAALLELEL 60

Query: 61  XXXISEKNXXXXXXXXXXXXXXXXXXXXDNALLQRDNALAALQNRNSAVNFPFSGGSQRG 120
              ISEKN                    DNALL+RDNALAALQ+RNS  NFPF+GG QRG
Sbjct: 61  EAAISEKNEALAARDVALRQRDEALAQRDNALLERDNALAALQSRNSTANFPFNGGIQRG 120

Query: 121 SKWIHHSPNHLSDITETSYITKDMIIRDASPVTIVTPEDVRSHQAKRTKESKVINXXXXX 180
           SK +HHS NH+S++TE +Y T D+IIRDASPVT++T EDV+SH  KRTKE+K        
Sbjct: 121 SKRMHHSSNHISNMTEAAYSTTDIIIRDASPVTVITSEDVKSHLTKRTKENKA-----SQ 175

Query: 181 XXXXXXXLGEDLNKKASSEGTKFRSEWDSQDVGLNLIAFDETIMPVPVCTCTGIARQCYK 240
                  +GEDLN+KA SEGTK +SEWD QDVGLN IAFDET+MPVPVCTCTG+ RQCYK
Sbjct: 176 TPTKIKKMGEDLNRKAYSEGTKIKSEWDRQDVGLNSIAFDETVMPVPVCTCTGVPRQCYK 235

Query: 241 WGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSKLASEGHDISIPLD 300
           WGNGGWQSSCCTTTLS++PLPQLPNKRHARIGGRKMSG+VF RLLS+ ASEGHD+SIPLD
Sbjct: 236 WGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGNVFRRLLSRFASEGHDLSIPLD 295

Query: 301 LKNYWARHGTNRYITIK 317
           LK+YWARHGTNRYITIK
Sbjct: 296 LKDYWARHGTNRYITIK 312


>Medtr1g023660.2 | GAGA-binding transcriptional activator
           BBR/BPC6-like protein | HC | chr1:7599732-7603354 |
           20130731
          Length = 340

 Score =  266 bits (679), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 151/348 (43%), Positives = 201/348 (57%), Gaps = 42/348 (12%)

Query: 3   DDRQHENGRHKMEYYRGARSPWDMDHQHQVKEPNALVMNKKLRSIMAERQXXXXXXXXXX 62
           DDR  ENGRHK + Y+ A+  W M  QHQ + P+     K++ SIMAER           
Sbjct: 2   DDR--ENGRHKADQYKSAQGQWLM-QQHQHQHPSM----KQIMSIMAERDAAIQERNLA- 53

Query: 63  XISEKNXXXXXXXXXXXXXXXXXXXXDNALLQRDNALAALQNRNSAV------NFPFSGG 116
            +SEK                     +NAL++RDNA+A LQ R +A+      + P    
Sbjct: 54  -LSEKKAALAERDMAFLQRDTAIAERNNALMERDNAIATLQFRENALANGGMSSCPPGCQ 112

Query: 117 SQRGSKWIHHSP---NHLSDITETSYITKDMIIRDASPVTIVTPEDVRS-HQAKRTKESK 172
             RG K IHH P   NHL ++ ++SY T+++   DA P   V+ E  +   +AKR KESK
Sbjct: 113 ISRGVKHIHHLPQQVNHLPNMGDSSYGTRELHTTDALPAAPVSLEVGKPPRRAKRPKESK 172

Query: 173 VINXXXXX-XXXXXXXLGEDLNKKASSEGTKF----------------------RSEWDS 209
             +              G+DLNK   +   +                       +++W  
Sbjct: 173 SDSPNKKTPKSRKVKKEGDDLNKTMFANNKELEWKSSEEIINGDDDLNKQLAISKADWKP 232

Query: 210 QDVGLNLIAFDETIMPVPVCTCTGIARQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHA 269
           QD+ LN +A+D++ MP P C+CTG+ RQCYKWGNGGWQS+CCTTTLSVYPLP +PNKRHA
Sbjct: 233 QDLALNQVAYDDSTMPAPACSCTGVLRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHA 292

Query: 270 RIGGRKMSGSVFTRLLSKLASEGHDISIPLDLKNYWARHGTNRYITIK 317
           R+GGRKMSGS F +LLS+LA+EGHD+S P+DLK++WA+HGTNRYITIK
Sbjct: 293 RVGGRKMSGSAFNKLLSRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 340


>Medtr1g023660.1 | GAGA-binding transcriptional activator
           BBR/BPC6-like protein | HC | chr1:7599725-7603391 |
           20130731
          Length = 340

 Score =  266 bits (679), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 151/348 (43%), Positives = 201/348 (57%), Gaps = 42/348 (12%)

Query: 3   DDRQHENGRHKMEYYRGARSPWDMDHQHQVKEPNALVMNKKLRSIMAERQXXXXXXXXXX 62
           DDR  ENGRHK + Y+ A+  W M  QHQ + P+     K++ SIMAER           
Sbjct: 2   DDR--ENGRHKADQYKSAQGQWLM-QQHQHQHPSM----KQIMSIMAERDAAIQERNLA- 53

Query: 63  XISEKNXXXXXXXXXXXXXXXXXXXXDNALLQRDNALAALQNRNSAV------NFPFSGG 116
            +SEK                     +NAL++RDNA+A LQ R +A+      + P    
Sbjct: 54  -LSEKKAALAERDMAFLQRDTAIAERNNALMERDNAIATLQFRENALANGGMSSCPPGCQ 112

Query: 117 SQRGSKWIHHSP---NHLSDITETSYITKDMIIRDASPVTIVTPEDVRS-HQAKRTKESK 172
             RG K IHH P   NHL ++ ++SY T+++   DA P   V+ E  +   +AKR KESK
Sbjct: 113 ISRGVKHIHHLPQQVNHLPNMGDSSYGTRELHTTDALPAAPVSLEVGKPPRRAKRPKESK 172

Query: 173 VINXXXXX-XXXXXXXLGEDLNKKASSEGTKF----------------------RSEWDS 209
             +              G+DLNK   +   +                       +++W  
Sbjct: 173 SDSPNKKTPKSRKVKKEGDDLNKTMFANNKELEWKSSEEIINGDDDLNKQLAISKADWKP 232

Query: 210 QDVGLNLIAFDETIMPVPVCTCTGIARQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHA 269
           QD+ LN +A+D++ MP P C+CTG+ RQCYKWGNGGWQS+CCTTTLSVYPLP +PNKRHA
Sbjct: 233 QDLALNQVAYDDSTMPAPACSCTGVLRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHA 292

Query: 270 RIGGRKMSGSVFTRLLSKLASEGHDISIPLDLKNYWARHGTNRYITIK 317
           R+GGRKMSGS F +LLS+LA+EGHD+S P+DLK++WA+HGTNRYITIK
Sbjct: 293 RVGGRKMSGSAFNKLLSRLAAEGHDLSHPVDLKDHWAKHGTNRYITIK 340