Miyakogusa Predicted Gene

Lj4g3v2882140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2882140.1 Non Characterized Hit- tr|F6GTF0|F6GTF0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.74,3e-17,STERILE ALPHA MOTIF (SAM) DOMAIN-CONTAINING
PROTEIN,NULL; SCP160,NULL; Sterile alpha motif.,Sterile ,CUFF.51821.1
         (308 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099820.2 | SAM domain protein | HC | chr8:40339866-403415...   384   e-107
Medtr8g099820.1 | SAM domain protein | HC | chr8:40339866-403415...   384   e-107
Medtr3g498865.1 | SAM domain protein | HC | chr3:45201119-452022...   227   1e-59
Medtr7g021220.1 | SAM domain protein | HC | chr7:6680731-6682024...    81   1e-15
Medtr3g105470.1 | DNA cross-link repair protein pso2/SNM1, putat...    59   7e-09

>Medtr8g099820.2 | SAM domain protein | HC | chr8:40339866-40341595
           | 20130731
          Length = 283

 Score =  384 bits (986), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 215/312 (68%), Positives = 235/312 (75%), Gaps = 33/312 (10%)

Query: 1   MAEIHAAEGQLNGAGNLILNSLEPIGTKRQRRPSVRLGDIGGDQPHESHHRRSTSSKGWK 60
           MAEI  AEGQ+NG G LILNS EPIGTKRQRRPSVRLGDIG D P++SH RR+  +K WK
Sbjct: 1   MAEIQPAEGQINGGGTLILNSTEPIGTKRQRRPSVRLGDIGVDPPYDSHARRN--NKSWK 58

Query: 61  LGFDH-RKEKDSTAANPSSGNKPSKTRPLTNLTSVADFNETLDGDEREGNNIDSVAIGSW 119
           L FDH RKEKDS A+      KPSK RPLTNL+SV +FNETLDG   EGN   +VAIG W
Sbjct: 59  LSFDHQRKEKDSIASG-----KPSKIRPLTNLSSVGEFNETLDG---EGNIDSTVAIGGW 110

Query: 120 KVKESKKR---ATKRVRSSWVSRIXXXXXXXXXXXXXXXXXXXXXXXXXXYREFDMENSD 176
           KVKESKKR   ATKRVRS+WVSRI                          YREFD+ENS+
Sbjct: 111 KVKESKKRGSVATKRVRSNWVSRIDETGGGVVEEKYSGAEDVDDG-----YREFDVENSE 165

Query: 177 SLLKEQSPIQSMENLGVDGHRRSFKGSRDHHDGIELSGPSDTDARDWKCGGTSGGDRNEN 236
           S LKEQSPI SMENLG+DGHRRSFK SRDH+DGIELSGPS+             GDRN+N
Sbjct: 166 SPLKEQSPIHSMENLGIDGHRRSFK-SRDHNDGIELSGPSEN------------GDRNDN 212

Query: 237 GGGRVRSGEDGVRIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKM 296
            G R+R GEDG+RIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGI+AVGSRRK+
Sbjct: 213 VG-RIRFGEDGIRIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGINAVGSRRKL 271

Query: 297 YCAIQKLGKGFS 308
           YCAIQKLGKGFS
Sbjct: 272 YCAIQKLGKGFS 283


>Medtr8g099820.1 | SAM domain protein | HC | chr8:40339866-40341595
           | 20130731
          Length = 283

 Score =  384 bits (986), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 215/312 (68%), Positives = 235/312 (75%), Gaps = 33/312 (10%)

Query: 1   MAEIHAAEGQLNGAGNLILNSLEPIGTKRQRRPSVRLGDIGGDQPHESHHRRSTSSKGWK 60
           MAEI  AEGQ+NG G LILNS EPIGTKRQRRPSVRLGDIG D P++SH RR+  +K WK
Sbjct: 1   MAEIQPAEGQINGGGTLILNSTEPIGTKRQRRPSVRLGDIGVDPPYDSHARRN--NKSWK 58

Query: 61  LGFDH-RKEKDSTAANPSSGNKPSKTRPLTNLTSVADFNETLDGDEREGNNIDSVAIGSW 119
           L FDH RKEKDS A+      KPSK RPLTNL+SV +FNETLDG   EGN   +VAIG W
Sbjct: 59  LSFDHQRKEKDSIASG-----KPSKIRPLTNLSSVGEFNETLDG---EGNIDSTVAIGGW 110

Query: 120 KVKESKKR---ATKRVRSSWVSRIXXXXXXXXXXXXXXXXXXXXXXXXXXYREFDMENSD 176
           KVKESKKR   ATKRVRS+WVSRI                          YREFD+ENS+
Sbjct: 111 KVKESKKRGSVATKRVRSNWVSRIDETGGGVVEEKYSGAEDVDDG-----YREFDVENSE 165

Query: 177 SLLKEQSPIQSMENLGVDGHRRSFKGSRDHHDGIELSGPSDTDARDWKCGGTSGGDRNEN 236
           S LKEQSPI SMENLG+DGHRRSFK SRDH+DGIELSGPS+             GDRN+N
Sbjct: 166 SPLKEQSPIHSMENLGIDGHRRSFK-SRDHNDGIELSGPSEN------------GDRNDN 212

Query: 237 GGGRVRSGEDGVRIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKM 296
            G R+R GEDG+RIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGI+AVGSRRK+
Sbjct: 213 VG-RIRFGEDGIRIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGINAVGSRRKL 271

Query: 297 YCAIQKLGKGFS 308
           YCAIQKLGKGFS
Sbjct: 272 YCAIQKLGKGFS 283


>Medtr3g498865.1 | SAM domain protein | HC | chr3:45201119-45202207
           | 20130731
          Length = 231

 Score =  227 bits (578), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/310 (48%), Positives = 175/310 (56%), Gaps = 81/310 (26%)

Query: 1   MAEIHAAEGQLNGAGN--LILNSLEPIGTKRQRRPSVRLGDIGGDQPHESHHRRSTSSKG 58
           M E+   E Q+NG     + L   EP G+KRQRRPSVRLGDIG DQP +SH RRS  SK 
Sbjct: 1   MEEVPPPEVQINGGATTAVTLPPSEPHGSKRQRRPSVRLGDIG-DQPSDSHPRRS--SKS 57

Query: 59  WKLGFDHRKEKDSTAANPSSGNKPSKTRPLTNLTSVADFNETLDGDEREGNNIDSVAIGS 118
           W+ G  +               KPSKTRPLTNLTSV+DF+E ++       N D V IGS
Sbjct: 58  WRFGLGN------------VSGKPSKTRPLTNLTSVSDFDEDVE------TNTDGVIIGS 99

Query: 119 WKVKESKKRATKRVRSSWVSRIXXXXXXXXXXXXXXXXXXXXXXXXXXYREFDMENSDSL 178
           WKVK    + +KR RS+WVS                            YR+F+ +NS S 
Sbjct: 100 WKVK----KGSKRPRSNWVS-----------SRIEEGEDVDNDNEDDLYRDFEGDNSGSR 144

Query: 179 LKEQSPIQSMENLGVDGHRRSFKGSRDHHDGIELSGPSDTDARDWKCGGTSGGDRNENGG 238
                 I+S ENLG                        D DAR            NE+GG
Sbjct: 145 ------IRSSENLG------------------------DFDAR------------NEDGG 162

Query: 239 GRVRSGEDGVRIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYC 298
            R   GEDGVRIWLNGLGLGRYAPVF++HEVDDEVLP+LTLEDLKDMGI+AVGSRRK+YC
Sbjct: 163 -RGSCGEDGVRIWLNGLGLGRYAPVFQIHEVDDEVLPLLTLEDLKDMGINAVGSRRKLYC 221

Query: 299 AIQKLGKGFS 308
           AIQKLGKGFS
Sbjct: 222 AIQKLGKGFS 231


>Medtr7g021220.1 | SAM domain protein | HC | chr7:6680731-6682024 |
           20130731
          Length = 245

 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 72/105 (68%), Gaps = 5/105 (4%)

Query: 203 SRDHHDGIELSGPSDTDARDWKCGGTSGGDRNENGGGRVRSGEDGVRIWLNGLGLGRYAP 262
           S D +D +++    D   R W+     GG  +E    R R   +GV  WL  LGL RYAP
Sbjct: 146 SVDENDFMQMDRNDDNRLRVWE--NDVGGVESE---SRERRKNEGVWSWLFDLGLSRYAP 200

Query: 263 VFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGKGF 307
           VFE+HEVDD++LP+LTLEDLKDMGISAVGSRRKMY AI+KL KGF
Sbjct: 201 VFEMHEVDDDLLPLLTLEDLKDMGISAVGSRRKMYNAIEKLRKGF 245


>Medtr3g105470.1 | DNA cross-link repair protein pso2/SNM1, putative
           | HC | chr3:48636150-48642452 | 20130731
          Length = 671

 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 225 CGGTSGGD---RNENGGGRVRSGEDGVRIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLED 281
           C   SG D    N++ G +       V  W+ GLGL +Y  VF   EVD + L  LT ED
Sbjct: 157 CLDKSGEDVAPPNDDVGAQFGPKNSPVVEWIRGLGLAKYEEVFVREEVDWDTLQWLTEED 216

Query: 282 LKDMGISAVGSRRKMYCAIQKLGKGFS 308
           L +MGI+A+G R+K+  A+ +L +G +
Sbjct: 217 LLNMGITALGPRKKIVHALSELRRGIT 243