Miyakogusa Predicted Gene

Lj4g3v2871910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2871910.1 Non Characterized Hit- tr|K4AWJ2|K4AWJ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.5,6e-16,MYB_LIKE,Myb-like domain; Myb_DNA-bind_4,NULL;
seg,NULL,gene.g57613.t1.1
         (355 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g100130.1 | myb/SANT-like DNA-binding domain protein | HC ...   344   7e-95
Medtr7g020870.1 | myb/SANT-like DNA-binding domain protein | HC ...   147   2e-35
Medtr7g020870.2 | myb/SANT-like DNA-binding domain protein | HC ...   145   4e-35
Medtr1g112650.1 | myb/SANT-like DNA-binding domain protein | HC ...   129   4e-30
Medtr1g094045.1 | Myb/SANT-like DNA-binding domain protein | HC ...    64   3e-10

>Medtr8g100130.1 | myb/SANT-like DNA-binding domain protein | HC |
           chr8:40178053-40180864 | 20130731
          Length = 361

 Score =  344 bits (883), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 188/336 (55%), Positives = 224/336 (66%), Gaps = 37/336 (11%)

Query: 44  RIKATRHPRWTRQETLVLIESKKLVENGEHGGYHRFRSPASSSGLVSPHHGDHKWDLVSS 103
           R+KATRHPRWTRQETLVLIE+KK++ENG+     R+RS  S+SGLV     D KWDLVSS
Sbjct: 39  RVKATRHPRWTRQETLVLIEAKKVIENGDQ--VCRYRS--STSGLV---QTDPKWDLVSS 91

Query: 104 LCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWETSIKEETESFWIMRNDLRKEKKLPGFFD 163
           LCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWE++IK+E+ESFWIMRND+RKE KLPGFFD
Sbjct: 92  LCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWESNIKDESESFWIMRNDVRKENKLPGFFD 151

Query: 164 AVVYNVLDGGVCTVGAFPLTLVKMSEGKTEKTXXXXXXXXXXXXXXXXXXXXXXXXXXAI 223
           +VVYNVLDGGVCT  AFPLTL+KM                                  AI
Sbjct: 152 SVVYNVLDGGVCTAAAFPLTLIKM---MPRAENGDQVEGVPALEQCNKEDENEEDEDEAI 208

Query: 224 VDSEKMGWXXXXXXXXXXXXGVRVSGQVKTPIPRRTRMRGGLQFT--PTFTLPNSG---- 277
           VDS+KM W             + V+   K P  +++ + GGL+ T  P  TLP S     
Sbjct: 209 VDSDKMEW---STEEENNETNIMVNSPFKAPNAKKSNIVGGLKVTPPPPITLPGSAERPP 265

Query: 278 ---YHG--EP-------VQEGPKRRRISPENSED------DIVKVMRRNSDILKAHLGAQ 319
              + G  +P         EG KR+R+S +NSED      D++KV+RRNS+ILK HLGAQ
Sbjct: 266 HPFFQGNYDPGCQREALFNEGYKRKRLSSDNSEDTADFNEDVIKVLRRNSNILKTHLGAQ 325

Query: 320 NMNQQLAREQQKQQTESLVATLGKLADALTKIADKL 355
           NMN QLAR+QQKQQ +SLVA LG+L DA+TKIADK+
Sbjct: 326 NMNSQLARDQQKQQNDSLVAALGRLTDAITKIADKM 361


>Medtr7g020870.1 | myb/SANT-like DNA-binding domain protein | HC |
           chr7:6527508-6523213 | 20130731
          Length = 341

 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 88/124 (70%), Gaps = 10/124 (8%)

Query: 48  TRHPRWTRQETLVLIESKKLVENGEHGGYHRFRSPASSSGLVSPHHGDHKWDLVSSLCQQ 107
            R PRWTRQE LVLI+ K   E+       RF+   + SG  S    + KW LVSS C++
Sbjct: 36  ARLPRWTRQEILVLIQGKSDAES-------RFKPGRNGSGFGS---SEPKWALVSSYCKK 85

Query: 108 HGVKRGAVQCRKRWGNLLTDFRKIKKWETSIKEETESFWIMRNDLRKEKKLPGFFDAVVY 167
           HGV RG +QCRKRW NL  D++KIK+WE+ +++ETESFW+MRNDLR+E+KLPG+FD  VY
Sbjct: 86  HGVNRGPIQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDKEVY 145

Query: 168 NVLD 171
            +LD
Sbjct: 146 EILD 149



 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 38/55 (69%)

Query: 301 IVKVMRRNSDILKAHLGAQNMNQQLAREQQKQQTESLVATLGKLADALTKIADKL 355
           ++ V+ +N  +L   L AQN+N QL R+QQ +   S+VA L KLA+AL +IADKL
Sbjct: 287 LIDVLEKNGKMLSEQLEAQNINFQLDRQQQNETASSIVAVLDKLANALGRIADKL 341


>Medtr7g020870.2 | myb/SANT-like DNA-binding domain protein | HC |
           chr7:6527499-6523901 | 20130731
          Length = 245

 Score =  145 bits (367), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 68/124 (54%), Positives = 88/124 (70%), Gaps = 10/124 (8%)

Query: 48  TRHPRWTRQETLVLIESKKLVENGEHGGYHRFRSPASSSGLVSPHHGDHKWDLVSSLCQQ 107
            R PRWTRQE LVLI+ K   E+       RF+   + SG  S    + KW LVSS C++
Sbjct: 36  ARLPRWTRQEILVLIQGKSDAES-------RFKPGRNGSGFGS---SEPKWALVSSYCKK 85

Query: 108 HGVKRGAVQCRKRWGNLLTDFRKIKKWETSIKEETESFWIMRNDLRKEKKLPGFFDAVVY 167
           HGV RG +QCRKRW NL  D++KIK+WE+ +++ETESFW+MRNDLR+E+KLPG+FD  VY
Sbjct: 86  HGVNRGPIQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLRRERKLPGYFDKEVY 145

Query: 168 NVLD 171
            +LD
Sbjct: 146 EILD 149


>Medtr1g112650.1 | myb/SANT-like DNA-binding domain protein | HC |
           chr1:50993163-50994113 | 20130731
          Length = 316

 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/125 (48%), Positives = 83/125 (66%), Gaps = 10/125 (8%)

Query: 47  ATRHPRWTRQETLVLIESKKLVENGEHGGYHRFRSPASSSGLVSPHHGDHKWDLVSSLCQ 106
           A R  RWTRQE LVL+       +G++    R + P  +  L      + KW LVSS C+
Sbjct: 37  AGRLQRWTRQEILVLV-------HGKNDAESRLK-PGRNGSLFGSF--EKKWTLVSSYCE 86

Query: 107 QHGVKRGAVQCRKRWGNLLTDFRKIKKWETSIKEETESFWIMRNDLRKEKKLPGFFDAVV 166
           +HGV R  +QC+KRWGNL  D++KIK+WE+ + +ETESFW+M  +LR+E+KLPG FD  V
Sbjct: 87  KHGVNRTPIQCKKRWGNLTADYKKIKEWESQVSDETESFWLMNVELRRERKLPGCFDIEV 146

Query: 167 YNVLD 171
           YN+LD
Sbjct: 147 YNILD 151



 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 38/56 (67%)

Query: 300 DIVKVMRRNSDILKAHLGAQNMNQQLAREQQKQQTESLVATLGKLADALTKIADKL 355
           +++KV+ +N  +L   L A+N + QL R+QQ Q    +VA L KLA+AL +IADKL
Sbjct: 261 ELIKVLEKNGKMLCEQLEARNKSLQLDRQQQNQTATKMVAVLDKLANALGRIADKL 316


>Medtr1g094045.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr1:42235840-42238314 | 20130731
          Length = 381

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 32/149 (21%)

Query: 53  WTRQETLVLIESKKLVE---------------------NGEHGGYHRFRSPASSSGLVSP 91
           WT QETL+LI +KKL +                     N      H   S AS S   S 
Sbjct: 56  WTIQETLILITAKKLDDERRLRNTSTSTSTPSSSSQDPNRTPNTTH-VTSIASPSTSTSR 114

Query: 92  HHGDHKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWET----------SIKEE 141
             G+ +W  V + C  HG  R   QC  +W NLL D++K++ +E+          S K+ 
Sbjct: 115 SSGELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRDYESKSESSPPNNNSNKDH 174

Query: 142 TESFWIMRNDLRKEKKLPGFFDAVVYNVL 170
             S+WI+    RKE+ LP      VY  +
Sbjct: 175 FPSYWILNKQQRKEQNLPSNMVFEVYQAI 203