Miyakogusa Predicted Gene

Lj4g3v2860640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2860640.1 Non Characterized Hit- tr|D7M0L1|D7M0L1_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,56.79,6e-18,
,CUFF.51787.1
         (257 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g095540.1 | hypothetical protein | HC | chr8:39994787-3998...   418   e-117
Medtr4g061370.1 | Myb/SANT-like DNA-binding domain protein | LC ...   191   6e-49

>Medtr8g095540.1 | hypothetical protein | HC |
           chr8:39994787-39987899 | 20130731
          Length = 650

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/257 (79%), Positives = 221/257 (85%)

Query: 1   MISNVLSERVLYSWEGRDIERRVIFVTSTLPEDVDSTMQKSLMDAADKCVSVDFALFQQK 60
           MIS+VLSERVLYSW+G+DIER+VI +TS LPEDV+  MQKSL DAAD+CVSVDFA+FQ K
Sbjct: 105 MISDVLSERVLYSWQGKDIERKVIVITSILPEDVNFVMQKSLTDAADRCVSVDFAVFQPK 164

Query: 61  SSHLTDSRENINTFRRCISHFDNCSVQTYIPDFRIFHGLVKRWLQILKDDMEEPFLARLI 120
           SSHL DSRENIN FRR ISH DNCSVQTYI DFR F+GLVKRWLQ+LKDDM++P LARLI
Sbjct: 165 SSHLIDSRENINNFRRSISHLDNCSVQTYITDFRSFNGLVKRWLQVLKDDMDKPLLARLI 224

Query: 121 FKDNLLGSVNQIFCNLFAPVYPITNSFSQCQTCRCHGIPLGQAEKKLNGISCPVTGCNLE 180
           FKD+LL SVN IFCNL  PV PITNS SQCQTCRCHGIPL  A KKLN  SC VTG NLE
Sbjct: 225 FKDDLLDSVNHIFCNLLPPVNPITNSISQCQTCRCHGIPLDDAGKKLNMFSCSVTGSNLE 284

Query: 181 TCDVIENSVRVGEKTILFLPSFHDSLKLLQITSPININVTERINLASLDEGLIMGASFVV 240
           TCDV ENSV +G KTILFLPSFH+SLKLL I SPIN+ VTERINLASLDEGLIMGASFVV
Sbjct: 285 TCDVNENSVCLGGKTILFLPSFHNSLKLLPIYSPINVTVTERINLASLDEGLIMGASFVV 344

Query: 241 TPSPNHVNETTSDDADQ 257
           TPSP HV ET SDD DQ
Sbjct: 345 TPSPYHVIETNSDDTDQ 361


>Medtr4g061370.1 | Myb/SANT-like DNA-binding domain protein | LC |
           chr4:22691367-22696834 | 20130731
          Length = 1316

 Score =  191 bits (485), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 97/129 (75%), Positives = 101/129 (78%)

Query: 129 VNQIFCNLFAPVYPITNSFSQCQTCRCHGIPLGQAEKKLNGISCPVTGCNLETCDVIENS 188
           VN IFCNL  PV  ITNSFSQCQT  CHGIPL  A KKLN  SCPVTG N+ETCDV EN 
Sbjct: 625 VNHIFCNLLPPVNLITNSFSQCQTFSCHGIPLDDAGKKLNPFSCPVTGSNMETCDVYENY 684

Query: 189 VRVGEKTILFLPSFHDSLKLLQITSPININVTERINLASLDEGLIMGASFVVTPSPNHVN 248
           V VG KTILFLPSFH+ LKLL I SPINI VT+RINLASLDEG+IMG SFVVTP P HV 
Sbjct: 685 VCVGGKTILFLPSFHNLLKLLPIYSPINITVTKRINLASLDEGVIMGVSFVVTPFPYHVI 744

Query: 249 ETTSDDADQ 257
           ET  DD DQ
Sbjct: 745 ETNFDDTDQ 753