Miyakogusa Predicted Gene

Lj4g3v2860630.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2860630.2 Non Characterized Hit- tr|D8RXM4|D8RXM4_SELML
Putative uncharacterized protein OS=Selaginella
moelle,41.12,0.00000000000004, ,CUFF.51786.2
         (194 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g095540.1 | hypothetical protein | HC | chr8:39994787-3998...   295   3e-80

>Medtr8g095540.1 | hypothetical protein | HC |
           chr8:39994787-39987899 | 20130731
          Length = 650

 Score =  295 bits (754), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 140/182 (76%), Positives = 162/182 (89%), Gaps = 2/182 (1%)

Query: 1   MDQGLICSSNCDLETMTEAPYHCYYILQPSDRGPMLMRRLAGAEEVLRLPDNQLTDSSVN 60
           MDQGLICSSNCDLETMTEAPYHCYYILQPSD GPMLMRR+AGAEEV + PD  L D SVN
Sbjct: 379 MDQGLICSSNCDLETMTEAPYHCYYILQPSDNGPMLMRRIAGAEEVKQSPDYPLIDPSVN 438

Query: 61  KEIGNSVQACLLKLDLTDYDPLLHERGFHQKLNLLVEESLQLGSIFPKLEGAFTELSSSQ 120
           K++ NSVQACLLK+DLTDYDPLLHERGFHQKLN+LV+ESL+LGS+FPK++GAF+ELSS++
Sbjct: 439 KDVENSVQACLLKIDLTDYDPLLHERGFHQKLNVLVKESLKLGSVFPKMDGAFSELSSTR 498

Query: 121 QPSSEVTTKAEKAINVIALDEETLPLELDITDQEDRTMACITEEWEQLVVNEDPKMYKPS 180
           QPSSEV  +AE A NVI +DE T  L +DITDQ+DRTMA ITEEW+QLVV+E+PK+Y PS
Sbjct: 499 QPSSEVIGRAESATNVIGVDEGT--LSMDITDQDDRTMAYITEEWKQLVVSEEPKLYSPS 556

Query: 181 GI 182
            I
Sbjct: 557 CI 558