Miyakogusa Predicted Gene

Lj4g3v2860540.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2860540.2 CUFF.51911.2
         (458 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g095410.2 | C3HC4-type RING zinc finger protein | HC | chr...   300   1e-81
Medtr8g095410.1 | C3HC4-type RING zinc finger protein | HC | chr...   300   1e-81

>Medtr8g095410.2 | C3HC4-type RING zinc finger protein | HC |
           chr8:39932580-39925843 | 20130731
          Length = 471

 Score =  300 bits (769), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 153/217 (70%), Positives = 171/217 (78%), Gaps = 1/217 (0%)

Query: 43  PSDQIWAKLVPSDSRYSDIVIWSDVTGICSEISATPSVKRCWCKIARNSDLCSATMENTS 102
           PSD+IWAKLV SDSRY D+ I SD   I SEIS     K  WCKI RNSDLCSAT++N S
Sbjct: 20  PSDEIWAKLVQSDSRYPDVEIRSDKGQIRSEISTASCDKHRWCKIVRNSDLCSATLKNKS 79

Query: 103 PNTILVDGAVVCNDETIAIKDGSEIISGSDK-GYVSYRFHIMSSPETCQRELKICVDVEN 161
            NTILVDGA V   +T+ IKD SEII G  K G+VSY+F I+SSPE CQ  LKICVDV++
Sbjct: 80  SNTILVDGAEVGKGDTVVIKDRSEIIPGPAKEGFVSYKFQIVSSPEICQTLLKICVDVDH 139

Query: 162 TKCSICLNIWHDVVTTGPCLHNFCNGCFSEWSRRSQAKCSIVLCPQCRAVVQFVKRNPFL 221
            KCSICLNIWHDVVT  PCLHNFCNGCFSEW RRSQ K S VLCPQCRAVVQFV +N FL
Sbjct: 140 AKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPQCRAVVQFVGKNHFL 199

Query: 222 RTIAEDIVRADSSLRRSDEEIALLDTHASVHTNFAEG 258
           RTIAED+V+ADSSLRRS +E+ALLDT+ASV +N   G
Sbjct: 200 RTIAEDMVKADSSLRRSHDEVALLDTYASVRSNLVIG 236


>Medtr8g095410.1 | C3HC4-type RING zinc finger protein | HC |
           chr8:39932580-39925972 | 20130731
          Length = 471

 Score =  300 bits (769), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 153/217 (70%), Positives = 171/217 (78%), Gaps = 1/217 (0%)

Query: 43  PSDQIWAKLVPSDSRYSDIVIWSDVTGICSEISATPSVKRCWCKIARNSDLCSATMENTS 102
           PSD+IWAKLV SDSRY D+ I SD   I SEIS     K  WCKI RNSDLCSAT++N S
Sbjct: 20  PSDEIWAKLVQSDSRYPDVEIRSDKGQIRSEISTASCDKHRWCKIVRNSDLCSATLKNKS 79

Query: 103 PNTILVDGAVVCNDETIAIKDGSEIISGSDK-GYVSYRFHIMSSPETCQRELKICVDVEN 161
            NTILVDGA V   +T+ IKD SEII G  K G+VSY+F I+SSPE CQ  LKICVDV++
Sbjct: 80  SNTILVDGAEVGKGDTVVIKDRSEIIPGPAKEGFVSYKFQIVSSPEICQTLLKICVDVDH 139

Query: 162 TKCSICLNIWHDVVTTGPCLHNFCNGCFSEWSRRSQAKCSIVLCPQCRAVVQFVKRNPFL 221
            KCSICLNIWHDVVT  PCLHNFCNGCFSEW RRSQ K S VLCPQCRAVVQFV +N FL
Sbjct: 140 AKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPQCRAVVQFVGKNHFL 199

Query: 222 RTIAEDIVRADSSLRRSDEEIALLDTHASVHTNFAEG 258
           RTIAED+V+ADSSLRRS +E+ALLDT+ASV +N   G
Sbjct: 200 RTIAEDMVKADSSLRRSHDEVALLDTYASVRSNLVIG 236