Miyakogusa Predicted Gene

Lj4g3v2860540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2860540.1 Non Characterized Hit- tr|K2MYU2|K2MYU2_TRYCR
Uncharacterized protein OS=Trypanosoma cruzi
marinkell,28.49,0.00000000000004,SUBFAMILY NOT NAMED,NULL; UBIQUITIN
LIGASE PROTEIN CHFR,NULL,CUFF.51911.1
         (464 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g095410.2 | C3HC4-type RING zinc finger protein | HC | chr...   745   0.0  
Medtr8g095410.1 | C3HC4-type RING zinc finger protein | HC | chr...   745   0.0  

>Medtr8g095410.2 | C3HC4-type RING zinc finger protein | HC |
           chr8:39932580-39925843 | 20130731
          Length = 471

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/451 (79%), Positives = 390/451 (86%), Gaps = 2/451 (0%)

Query: 15  PSDEIWAKLVPSDSRYSDVEIRSDEKVICSEISATLSDKHSWCKIVRNSDLCSATMENNS 74
           PSDEIWAKLV SDSRY DVEIRSD+  I SEIS    DKH WCKIVRNSDLCSAT++N S
Sbjct: 20  PSDEIWAKLVQSDSRYPDVEIRSDKGQIRSEISTASCDKHRWCKIVRNSDLCSATLKNKS 79

Query: 75  PNTILVDGAEVCNDNTIIIKDGSEIIAGPDKEGFVSYRFHLVSSPETCQRQLKICVDVEH 134
            NTILVDGAEV   +T++IKD SEII GP KEGFVSY+F +VSSPE CQ  LKICVDV+H
Sbjct: 80  SNTILVDGAEVGKGDTVVIKDRSEIIPGPAKEGFVSYKFQIVSSPEICQTLLKICVDVDH 139

Query: 135 AKCSICLNIWHDVVTIAPCLHNFCNGCFSEWLRRSQEKRSTVLCPQCRAVVQFVGRNHFL 194
           AKCSICLNIWHDVVT+APCLHNFCNGCFSEWLRRSQEKRSTVLCPQCRAVVQFVG+NHFL
Sbjct: 140 AKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPQCRAVVQFVGKNHFL 199

Query: 195 RTIAEDMVRADSTLSHADEEIALLDTYASVRSNLVIGPGKRSRKR--AQTPLDDQTDVTG 252
           RTIAEDMV+ADS+L  + +E+ALLDTYASVRSNLVIG GK+SRKR  A T + +Q+D   
Sbjct: 200 RTIAEDMVKADSSLRRSHDEVALLDTYASVRSNLVIGSGKKSRKRERANTTMVNQSDGPD 259

Query: 253 HQCPQCVTEVGGFRCNHSIAHLQCQACGGMMPSRTGFDVPQYCSGCDRPFCGAYWNALGV 312
           H C QCVT VGGF+C+ S  HLQCQ CGGMMPSRTG  VPQYC GCDRPFCGAYW+ALGV
Sbjct: 260 HHCSQCVTVVGGFQCDPSTIHLQCQECGGMMPSRTGLGVPQYCLGCDRPFCGAYWSALGV 319

Query: 313 TRSSSYPVCSPETLRPISEHSVSRIPLLAHEKNLHEQNITESCIRQMGRTLQNVIAEMIT 372
           T S SYPVCSP+TLRPISEH++S IPL+AHEKNLHEQNITESCIRQMGRTLQ+VI+E I 
Sbjct: 320 TGSGSYPVCSPDTLRPISEHTISGIPLVAHEKNLHEQNITESCIRQMGRTLQDVISEWIA 379

Query: 373 KLYNGEIDRTRLMLNHVDTITSRTFVCGDCYQKLVSFLLYWFRISIPKRLLPPDASARED 432
           KL N EID TRLMLNH + +T+ T VC DCYQKLVSF LYWFRIS PK LLPP+AS RED
Sbjct: 380 KLNNREIDTTRLMLNHAEMMTAGTLVCSDCYQKLVSFFLYWFRISTPKHLLPPEASTRED 439

Query: 433 CWYGYACRTQHRSEEHARKRNHVCRPTRGSH 463
           CWYGYACRTQHRSEEHARKRNHVCRPTRGSH
Sbjct: 440 CWYGYACRTQHRSEEHARKRNHVCRPTRGSH 470


>Medtr8g095410.1 | C3HC4-type RING zinc finger protein | HC |
           chr8:39932580-39925972 | 20130731
          Length = 471

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/451 (79%), Positives = 390/451 (86%), Gaps = 2/451 (0%)

Query: 15  PSDEIWAKLVPSDSRYSDVEIRSDEKVICSEISATLSDKHSWCKIVRNSDLCSATMENNS 74
           PSDEIWAKLV SDSRY DVEIRSD+  I SEIS    DKH WCKIVRNSDLCSAT++N S
Sbjct: 20  PSDEIWAKLVQSDSRYPDVEIRSDKGQIRSEISTASCDKHRWCKIVRNSDLCSATLKNKS 79

Query: 75  PNTILVDGAEVCNDNTIIIKDGSEIIAGPDKEGFVSYRFHLVSSPETCQRQLKICVDVEH 134
            NTILVDGAEV   +T++IKD SEII GP KEGFVSY+F +VSSPE CQ  LKICVDV+H
Sbjct: 80  SNTILVDGAEVGKGDTVVIKDRSEIIPGPAKEGFVSYKFQIVSSPEICQTLLKICVDVDH 139

Query: 135 AKCSICLNIWHDVVTIAPCLHNFCNGCFSEWLRRSQEKRSTVLCPQCRAVVQFVGRNHFL 194
           AKCSICLNIWHDVVT+APCLHNFCNGCFSEWLRRSQEKRSTVLCPQCRAVVQFVG+NHFL
Sbjct: 140 AKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQEKRSTVLCPQCRAVVQFVGKNHFL 199

Query: 195 RTIAEDMVRADSTLSHADEEIALLDTYASVRSNLVIGPGKRSRKR--AQTPLDDQTDVTG 252
           RTIAEDMV+ADS+L  + +E+ALLDTYASVRSNLVIG GK+SRKR  A T + +Q+D   
Sbjct: 200 RTIAEDMVKADSSLRRSHDEVALLDTYASVRSNLVIGSGKKSRKRERANTTMVNQSDGPD 259

Query: 253 HQCPQCVTEVGGFRCNHSIAHLQCQACGGMMPSRTGFDVPQYCSGCDRPFCGAYWNALGV 312
           H C QCVT VGGF+C+ S  HLQCQ CGGMMPSRTG  VPQYC GCDRPFCGAYW+ALGV
Sbjct: 260 HHCSQCVTVVGGFQCDPSTIHLQCQECGGMMPSRTGLGVPQYCLGCDRPFCGAYWSALGV 319

Query: 313 TRSSSYPVCSPETLRPISEHSVSRIPLLAHEKNLHEQNITESCIRQMGRTLQNVIAEMIT 372
           T S SYPVCSP+TLRPISEH++S IPL+AHEKNLHEQNITESCIRQMGRTLQ+VI+E I 
Sbjct: 320 TGSGSYPVCSPDTLRPISEHTISGIPLVAHEKNLHEQNITESCIRQMGRTLQDVISEWIA 379

Query: 373 KLYNGEIDRTRLMLNHVDTITSRTFVCGDCYQKLVSFLLYWFRISIPKRLLPPDASARED 432
           KL N EID TRLMLNH + +T+ T VC DCYQKLVSF LYWFRIS PK LLPP+AS RED
Sbjct: 380 KLNNREIDTTRLMLNHAEMMTAGTLVCSDCYQKLVSFFLYWFRISTPKHLLPPEASTRED 439

Query: 433 CWYGYACRTQHRSEEHARKRNHVCRPTRGSH 463
           CWYGYACRTQHRSEEHARKRNHVCRPTRGSH
Sbjct: 440 CWYGYACRTQHRSEEHARKRNHVCRPTRGSH 470