Miyakogusa Predicted Gene

Lj4g3v2826850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2826850.1 Non Characterized Hit- tr|C5WTE9|C5WTE9_SORBI
Putative uncharacterized protein Sb01g029930
OS=Sorghu,37.16,4e-18,seg,NULL,CUFF.51741.1
         (255 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g094540.1 | transmembrane protein, putative | HC | chr8:39...   350   8e-97
Medtr3g096890.3 | transmembrane protein, putative | HC | chr3:44...   312   2e-85
Medtr3g096890.1 | transmembrane protein, putative | HC | chr3:44...   311   3e-85
Medtr3g096890.2 | transmembrane protein, putative | HC | chr3:44...   208   5e-54
Medtr1g100800.1 | plant/K24M7-17 protein | HC | chr1:45250592-45...   110   1e-24

>Medtr8g094540.1 | transmembrane protein, putative | HC |
           chr8:39475315-39474161 | 20130731
          Length = 262

 Score =  350 bits (898), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 177/249 (71%), Positives = 197/249 (79%), Gaps = 7/249 (2%)

Query: 1   MSGVSLAMAGTDTNTNPKQQAASAAPVGSMNMMGSLRVIEVQLVAFVLVFSASGLVPLFD 60
           MSG+SLA+AG    T  KQ+       GSM MMGSLRVIE+QLVAFVLVFSASGLVPL D
Sbjct: 1   MSGLSLAVAGGGYETEKKQEH------GSMTMMGSLRVIELQLVAFVLVFSASGLVPLLD 54

Query: 61  LLFPALTTIYLMALARFAFPSNVRGGPRQIIFHGSRGFQAYVVVGTTVGLFLPLAYVLGG 120
           LLFP   +IYL+AL+RFAFPS  RG   Q +FHGS+ FQ YV+VGT +GLFLPLAYVLGG
Sbjct: 55  LLFPFFVSIYLVALSRFAFPSYNRG-VSQTVFHGSKAFQFYVIVGTILGLFLPLAYVLGG 113

Query: 121 FGRGDELAVQSASPHLFLMSVQILTENVISGLSLFSPPVRALVPLMYTIRRIFVDVDWVQ 180
           FGRGD+LAV+SASPHLFL+S QILTEN+ISGLS+FSPPVRALVPLMYT+RRIFVD++W+ 
Sbjct: 114 FGRGDKLAVKSASPHLFLISFQILTENIISGLSVFSPPVRALVPLMYTVRRIFVDINWIH 173

Query: 181 NVWLYKTLPQNALLKDKAWFWFGRXXXXXXXXXXXXXXCAFLIPRFLPRAFKRYFQERDE 240
           NVWL  TLP NA  KDKAWFWFGR                FLIPRFLPRAFKRYFQER E
Sbjct: 174 NVWLNITLPANAHFKDKAWFWFGRVLAVANLVYFSINLFGFLIPRFLPRAFKRYFQERGE 233

Query: 241 IYAKEAEDK 249
           IYAK AEDK
Sbjct: 234 IYAKAAEDK 242


>Medtr3g096890.3 | transmembrane protein, putative | HC |
           chr3:44344457-44342562 | 20130731
          Length = 269

 Score =  312 bits (800), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 162/258 (62%), Positives = 192/258 (74%), Gaps = 6/258 (2%)

Query: 1   MSGVSLAMAGTDTNTNP--KQQAASAAPVGSMNMMGSLRVIEVQLVAFVLVFSASGLVPL 58
           MSGVS+A A       P  K    S AP     MMGSLRVIE+QLVAF+LVFSASGLVPL
Sbjct: 1   MSGVSVATAPPTAPQTPGTKANQRSEAPSAG-GMMGSLRVIELQLVAFILVFSASGLVPL 59

Query: 59  FDLLFPALTTIYLMALARFAFPSNVRGG---PRQIIFHGSRGFQAYVVVGTTVGLFLPLA 115
            DL+FPAL + Y++ALAR+AFPS+        +Q IF  S  F+ Y++VGTT+GLFLPLA
Sbjct: 60  LDLVFPALASAYILALARYAFPSSPSTTSNSQQQEIFQVSSMFRMYIIVGTTIGLFLPLA 119

Query: 116 YVLGGFGRGDELAVQSASPHLFLMSVQILTENVISGLSLFSPPVRALVPLMYTIRRIFVD 175
           YVLGGF RGD+ AV+SA+PHLFL+S QILTEN+IS LSLFSPPVRALVP++YTIRRIFVD
Sbjct: 120 YVLGGFARGDQHAVRSATPHLFLLSFQILTENIISSLSLFSPPVRALVPMIYTIRRIFVD 179

Query: 176 VDWVQNVWLYKTLPQNALLKDKAWFWFGRXXXXXXXXXXXXXXCAFLIPRFLPRAFKRYF 235
           +DW+ +VWL KT P NA  +D AW+WFG+              C FLIPRFLPRAF+RYF
Sbjct: 180 IDWINDVWLNKTFPANARFQDTAWYWFGKGLAVANLAYFSINLCVFLIPRFLPRAFERYF 239

Query: 236 QERDEIYAKEAEDKLNVA 253
           QER EIYAK AEDK +V+
Sbjct: 240 QERGEIYAKSAEDKRSVS 257


>Medtr3g096890.1 | transmembrane protein, putative | HC |
           chr3:44344524-44342621 | 20130731
          Length = 333

 Score =  311 bits (798), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 162/258 (62%), Positives = 192/258 (74%), Gaps = 6/258 (2%)

Query: 1   MSGVSLAMAGTDTNTNP--KQQAASAAPVGSMNMMGSLRVIEVQLVAFVLVFSASGLVPL 58
           MSGVS+A A       P  K    S AP     MMGSLRVIE+QLVAF+LVFSASGLVPL
Sbjct: 65  MSGVSVATAPPTAPQTPGTKANQRSEAPSAG-GMMGSLRVIELQLVAFILVFSASGLVPL 123

Query: 59  FDLLFPALTTIYLMALARFAFPSNVRGG---PRQIIFHGSRGFQAYVVVGTTVGLFLPLA 115
            DL+FPAL + Y++ALAR+AFPS+        +Q IF  S  F+ Y++VGTT+GLFLPLA
Sbjct: 124 LDLVFPALASAYILALARYAFPSSPSTTSNSQQQEIFQVSSMFRMYIIVGTTIGLFLPLA 183

Query: 116 YVLGGFGRGDELAVQSASPHLFLMSVQILTENVISGLSLFSPPVRALVPLMYTIRRIFVD 175
           YVLGGF RGD+ AV+SA+PHLFL+S QILTEN+IS LSLFSPPVRALVP++YTIRRIFVD
Sbjct: 184 YVLGGFARGDQHAVRSATPHLFLLSFQILTENIISSLSLFSPPVRALVPMIYTIRRIFVD 243

Query: 176 VDWVQNVWLYKTLPQNALLKDKAWFWFGRXXXXXXXXXXXXXXCAFLIPRFLPRAFKRYF 235
           +DW+ +VWL KT P NA  +D AW+WFG+              C FLIPRFLPRAF+RYF
Sbjct: 244 IDWINDVWLNKTFPANARFQDTAWYWFGKGLAVANLAYFSINLCVFLIPRFLPRAFERYF 303

Query: 236 QERDEIYAKEAEDKLNVA 253
           QER EIYAK AEDK +V+
Sbjct: 304 QERGEIYAKSAEDKRSVS 321


>Medtr3g096890.2 | transmembrane protein, putative | HC |
           chr3:44344587-44342621 | 20130731
          Length = 262

 Score =  208 bits (529), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/255 (48%), Positives = 143/255 (56%), Gaps = 49/255 (19%)

Query: 1   MSGVSLAMAGTDTNTNP--KQQAASAAPVGSMNMMGSLRVIEVQLVAFVLVFSASGLVPL 58
           MSGVS+A A       P  K    S AP     MMGSLRVIE+QLVAF+LVFSASGLVPL
Sbjct: 43  MSGVSVATAPPTAPQTPGTKANQRSEAPSAG-GMMGSLRVIELQLVAFILVFSASGLVPL 101

Query: 59  FDLLFPALTTIYLMALARFAFPSNVRGGPRQIIFHGSRGFQAYVVVGTTVGLFLPLAYVL 118
            DL+FPAL +                               AY+           LA   
Sbjct: 102 LDLVFPALAS-------------------------------AYI-----------LALAR 119

Query: 119 GGFGRGDELAVQSASPHLFLMSVQILTENVISGLSLFSPPVRALVPLMYTIRRIFVDVDW 178
             F         S    +F    QILTEN+IS LSLFSPPVRALVP++YTIRRIFVD+DW
Sbjct: 120 YAFPSSPSTTSNSQQQEIF----QILTENIISSLSLFSPPVRALVPMIYTIRRIFVDIDW 175

Query: 179 VQNVWLYKTLPQNALLKDKAWFWFGRXXXXXXXXXXXXXXCAFLIPRFLPRAFKRYFQER 238
           + +VWL KT P NA  +D AW+WFG+              C FLIPRFLPRAF+RYFQER
Sbjct: 176 INDVWLNKTFPANARFQDTAWYWFGKGLAVANLAYFSINLCVFLIPRFLPRAFERYFQER 235

Query: 239 DEIYAKEAEDKLNVA 253
            EIYAK AEDK +V+
Sbjct: 236 GEIYAKSAEDKRSVS 250


>Medtr1g100800.1 | plant/K24M7-17 protein | HC |
           chr1:45250592-45249391 | 20130731
          Length = 246

 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 4/200 (2%)

Query: 40  EVQLVAFVLVFSASGLVPLFDLLFPALTTIYLMALARFAFPSNVRGGPRQIIFHGSRGFQ 99
           ++  +A V+V SASG+V   D  F   + IY+  +++ AFPS+       I     +  +
Sbjct: 49  QLNCLAVVVVLSASGMVSPEDFGFVLFSVIYMCFISKVAFPSHPSKEQPPIFTQQIKILK 108

Query: 100 AYVVVGTTVGLFLPLAYVLGGFGRGDELAVQSASPHLFLMSVQILTENVISGLSLFSPPV 159
            YV +G  +GL+ P+AY+L G   GD+  +++A+PH+FL++ Q+  E V    + FS P+
Sbjct: 109 IYVFIGAIIGLYAPIAYILHGIFEGDKEGIKAATPHVFLLASQVFMEGVAFS-NGFSSPI 167

Query: 160 RALVPLMYTIRRIFVDVDWVQNVWLYKTLPQNALLKDKAWFWFGRXXXXXXXXXXXXXXC 219
           RA VP++Y  RRIF  VDW+++  + K   +++    +   + GR               
Sbjct: 168 RAFVPVIYNSRRIFTIVDWLRD-EISKVGEEHSGSYKR--IYAGRALAVANMAFWCFNLF 224

Query: 220 AFLIPRFLPRAFKRYFQERD 239
            FLIP +LPR FK Y+  + 
Sbjct: 225 GFLIPVYLPRVFKAYYSSQK 244