Miyakogusa Predicted Gene

Lj4g3v2821270.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2821270.2 Non Characterized Hit- tr|I3T743|I3T743_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,92.5,0,Thioredoxin-like,Thioredoxin-like fold; SCO1/SENC,Copper
chaperone SCO1/SenC; seg,NULL; no descripti,CUFF.51720.2
         (259 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g090295.1 | electron transport SCO1/SenC family protein, p...   312   2e-85
Medtr8g090295.2 | electron transport SCO1/SenC family protein, p...   165   4e-41
Medtr7g069070.1 | electron transport SCO1/SenC family protein, p...   150   2e-36

>Medtr8g090295.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr8:37944701-37948024 | 20130731
          Length = 271

 Score =  312 bits (800), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 168/272 (61%), Positives = 190/272 (69%), Gaps = 14/272 (5%)

Query: 1   MSIPRFLLSSSK-QLRSTRQALTLL-PRSVPSRTTQSASYRNSA----------ESHSSR 48
           MS+ RFL  SSK +  STR+ALTLL  R VPS  TQ+  Y  S           +S SSR
Sbjct: 1   MSVSRFLHFSSKYRSTSTREALTLLLTRRVPSNRTQAVRYSKSTKHDLHPVSPPQSESSR 60

Query: 49  S-WGAYVISXXXXXXXXXXXXXHYNDLNSFTLKSLKFKCLGKGHANRPKIRGGPFTLTNT 107
           S  G Y +              HYND      K  +     +     P I GGPFTL N 
Sbjct: 61  SRGGVYAVPAVLLGFAGIAAFFHYNDERRAVPKGDQGDSRNRNIVCGPII-GGPFTLVNK 119

Query: 108 ENQTVTERDFLGKWVLLYFGYTSSPDIGPAQLLLMSMIIDILESKHKVKVLPVFVSIDPQ 167
           E QTVTER+FLG WVLLYFGYTSSPDIGP Q+ LM+   DILESK  +K+LPVFV+IDPQ
Sbjct: 120 EKQTVTERNFLGNWVLLYFGYTSSPDIGPEQVQLMAKATDILESKQNLKILPVFVTIDPQ 179

Query: 168 RDTPSQIRAYLKVFDSRITGLTGPVAAVRQMAQEYRVYFKKVEEDGDDYLVDISHSMYLL 227
           RDTPSQ+RAYL+ F+SRI GLTGPVAA+RQMAQ+YRVYFKKVEEDG DYLVD SH+MYLL
Sbjct: 180 RDTPSQLRAYLEEFNSRIIGLTGPVAAIRQMAQQYRVYFKKVEEDGGDYLVDSSHNMYLL 239

Query: 228 NPKMEVARCFGIEYNAEQLSEAIWKELNKKPS 259
           +P MEV RCFG+EYNAEQLSEAIWKELNKKPS
Sbjct: 240 SPDMEVVRCFGVEYNAEQLSEAIWKELNKKPS 271


>Medtr8g090295.2 | electron transport SCO1/SenC family protein,
           putative | HC | chr8:37944701-37947271 | 20130731
          Length = 192

 Score =  165 bits (417), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/192 (52%), Positives = 116/192 (60%), Gaps = 14/192 (7%)

Query: 1   MSIPRFLLSSSK-QLRSTRQALTLL-PRSVPSRTTQSASYRNSA----------ESHSSR 48
           MS+ RFL  SSK +  STR+ALTLL  R VPS  TQ+  Y  S           +S SSR
Sbjct: 1   MSVSRFLHFSSKYRSTSTREALTLLLTRRVPSNRTQAVRYSKSTKHDLHPVSPPQSESSR 60

Query: 49  S-WGAYVISXXXXXXXXXXXXXHYNDLNSFTLKSLKFKCLGKGHANRPKIRGGPFTLTNT 107
           S  G Y +              HYND      K  +     +     P I GGPFTL N 
Sbjct: 61  SRGGVYAVPAVLLGFAGIAAFFHYNDERRAVPKGDQGDSRNRNIVCGPII-GGPFTLVNK 119

Query: 108 ENQTVTERDFLGKWVLLYFGYTSSPDIGPAQLLLMSMIIDILESKHKVKVLPVFVSIDPQ 167
           E QTVTER+FLG WVLLYFGYTSSPDIGP Q+ LM+   DILESK  +K+LPVFV+IDPQ
Sbjct: 120 EKQTVTERNFLGNWVLLYFGYTSSPDIGPEQVQLMAKATDILESKQNLKILPVFVTIDPQ 179

Query: 168 RDTPSQIRAYLK 179
           RDTPSQ+RAYL+
Sbjct: 180 RDTPSQLRAYLE 191


>Medtr7g069070.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr7:25419911-25424053 | 20130731
          Length = 329

 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 101/156 (64%)

Query: 99  GGPFTLTNTENQTVTERDFLGKWVLLYFGYTSSPDIGPAQLLLMSMIIDILESKHKVKVL 158
           GGPF LTN   + VT++DF+GKW L+YFG+T  PDI P +L  +   +D ++ K  ++ +
Sbjct: 169 GGPFELTNHHGKRVTDKDFMGKWTLMYFGFTHCPDICPEELQKLVAAVDKIKEKSGIETV 228

Query: 159 PVFVSIDPQRDTPSQIRAYLKVFDSRITGLTGPVAAVRQMAQEYRVYFKKVEEDGDDYLV 218
           PVF+S+DP+RDT  Q+  Y+K F  ++ GLTG    ++ +A+ YRVY+ K  E+  DYLV
Sbjct: 229 PVFISVDPERDTVEQVAEYVKEFHPKLIGLTGSPDEIKSVARAYRVYYMKTAEEDSDYLV 288

Query: 219 DISHSMYLLNPKMEVARCFGIEYNAEQLSEAIWKEL 254
           D S  +YL+ P M   + FG   + + L++ + KE+
Sbjct: 289 DHSIVIYLMAPDMGFVKFFGKNNDVDSLADGVIKEI 324