Miyakogusa Predicted Gene

Lj4g3v2821270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2821270.1 Non Characterized Hit- tr|I1KT38|I1KT38_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15699 PE,77.17,0,no
description,Thioredoxin-like fold; SCO1/SENC,Copper chaperone
SCO1/SenC; seg,NULL; Thioredoxin-li,CUFF.51720.1
         (275 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g090295.1 | electron transport SCO1/SenC family protein, p...   400   e-112
Medtr8g090295.2 | electron transport SCO1/SenC family protein, p...   249   2e-66
Medtr7g069070.1 | electron transport SCO1/SenC family protein, p...   154   9e-38

>Medtr8g090295.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr8:37944701-37948024 | 20130731
          Length = 271

 Score =  400 bits (1029), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/278 (72%), Positives = 223/278 (80%), Gaps = 10/278 (3%)

Query: 1   MSIPRFILSSSKLRST--RQTL-ILLRRSVPSKTTQSVSYTNSTQQGKPKYELXXXXXXX 57
           MS+ RF+  SSK RST  R+ L +LL R VPS  TQ+V Y+ ST     K++L       
Sbjct: 1   MSVSRFLHFSSKYRSTSTREALTLLLTRRVPSNRTQAVRYSKST-----KHDLHPVSPPQ 55

Query: 58  XXXXXXXXXWGAYIIPAAVLGFAGIAAFFHYNDERRAVPKGHQGSSQIANVANGPIIGGP 117
                     G Y +PA +LGFAGIAAFFHYNDERRAVPKG QG S+  N+  GPIIGGP
Sbjct: 56  SESSRSRG--GVYAVPAVLLGFAGIAAFFHYNDERRAVPKGDQGDSRNRNIVCGPIIGGP 113

Query: 118 FTLINTEKEPVTERTFLGKWVLLYFGYTSSPDIGPEQVHLMAKAIDILESKQNLKILPVF 177
           FTL+N EK+ VTER FLG WVLLYFGYTSSPDIGPEQV LMAKA DILESKQNLKILPVF
Sbjct: 114 FTLVNKEKQTVTERNFLGNWVLLYFGYTSSPDIGPEQVQLMAKATDILESKQNLKILPVF 173

Query: 178 VTIDPQRDSPSQLRAYLKEFDSRIIGLTGPVAAVRQMAQEYRVYFKKVEEDGDDYLVDIS 237
           VTIDPQRD+PSQLRAYL+EF+SRIIGLTGPVAA+RQMAQ+YRVYFKKVEEDG DYLVD S
Sbjct: 174 VTIDPQRDTPSQLRAYLEEFNSRIIGLTGPVAAIRQMAQQYRVYFKKVEEDGGDYLVDSS 233

Query: 238 HSMYLLNPKMEVARCFGIEYNAEQLSEAIWKELNKKPS 275
           H+MYLL+P MEV RCFG+EYNAEQLSEAIWKELNKKPS
Sbjct: 234 HNMYLLSPDMEVVRCFGVEYNAEQLSEAIWKELNKKPS 271


>Medtr8g090295.2 | electron transport SCO1/SenC family protein,
           putative | HC | chr8:37944701-37947271 | 20130731
          Length = 192

 Score =  249 bits (636), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 131/198 (66%), Positives = 147/198 (74%), Gaps = 10/198 (5%)

Query: 1   MSIPRFILSSSKLRST--RQTL-ILLRRSVPSKTTQSVSYTNSTQQGKPKYELXXXXXXX 57
           MS+ RF+  SSK RST  R+ L +LL R VPS  TQ+V Y+ ST     K++L       
Sbjct: 1   MSVSRFLHFSSKYRSTSTREALTLLLTRRVPSNRTQAVRYSKST-----KHDLHPVSPPQ 55

Query: 58  XXXXXXXXXWGAYIIPAAVLGFAGIAAFFHYNDERRAVPKGHQGSSQIANVANGPIIGGP 117
                     G Y +PA +LGFAGIAAFFHYNDERRAVPKG QG S+  N+  GPIIGGP
Sbjct: 56  SESSRSR--GGVYAVPAVLLGFAGIAAFFHYNDERRAVPKGDQGDSRNRNIVCGPIIGGP 113

Query: 118 FTLINTEKEPVTERTFLGKWVLLYFGYTSSPDIGPEQVHLMAKAIDILESKQNLKILPVF 177
           FTL+N EK+ VTER FLG WVLLYFGYTSSPDIGPEQV LMAKA DILESKQNLKILPVF
Sbjct: 114 FTLVNKEKQTVTERNFLGNWVLLYFGYTSSPDIGPEQVQLMAKATDILESKQNLKILPVF 173

Query: 178 VTIDPQRDSPSQLRAYLK 195
           VTIDPQRD+PSQLRAYL+
Sbjct: 174 VTIDPQRDTPSQLRAYLE 191


>Medtr7g069070.1 | electron transport SCO1/SenC family protein,
           putative | HC | chr7:25419911-25424053 | 20130731
          Length = 329

 Score =  154 bits (389), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 123/208 (59%), Gaps = 12/208 (5%)

Query: 73  PAAVLGF-----AGIAAFFHYNDERRAVPKGHQGSSQIANVANGP-----IIGGPFTLIN 122
           P A L F      G    ++Y+ E++   +  Q  S+   V  GP      IGGPF L N
Sbjct: 119 PVAWLSFVFLILTGGGLVYYYDKEKKRHIEDIQNVSEA--VKQGPSAGKAAIGGPFELTN 176

Query: 123 TEKEPVTERTFLGKWVLLYFGYTSSPDIGPEQVHLMAKAIDILESKQNLKILPVFVTIDP 182
              + VT++ F+GKW L+YFG+T  PDI PE++  +  A+D ++ K  ++ +PVF+++DP
Sbjct: 177 HHGKRVTDKDFMGKWTLMYFGFTHCPDICPEELQKLVAAVDKIKEKSGIETVPVFISVDP 236

Query: 183 QRDSPSQLRAYLKEFDSRIIGLTGPVAAVRQMAQEYRVYFKKVEEDGDDYLVDISHSMYL 242
           +RD+  Q+  Y+KEF  ++IGLTG    ++ +A+ YRVY+ K  E+  DYLVD S  +YL
Sbjct: 237 ERDTVEQVAEYVKEFHPKLIGLTGSPDEIKSVARAYRVYYMKTAEEDSDYLVDHSIVIYL 296

Query: 243 LNPKMEVARCFGIEYNAEQLSEAIWKEL 270
           + P M   + FG   + + L++ + KE+
Sbjct: 297 MAPDMGFVKFFGKNNDVDSLADGVIKEI 324