Miyakogusa Predicted Gene

Lj4g3v2821260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2821260.1 tr|F2DEU4|F2DEU4_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,61.02,0.00000000000003,PLAT,Lipoxygenase, LH2; FAMILY NOT
NAMED,NULL; no description,Lipoxygenase, LH2;
Lipase/lipooxygenas,CUFF.51722.1
         (190 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g090315.1 | PLAT-plant-stress protein | HC | chr8:37963076...   300   7e-82
Medtr3g087510.1 | PLAT-plant-stress protein | HC | chr3:39668097...   249   9e-67
Medtr3g087490.1 | PLAT-plant-stress protein | HC | chr3:39663898...   229   1e-60
Medtr4g036345.1 | PLAT-plant-stress protein | LC | chr4:13087228...   174   4e-44

>Medtr8g090315.1 | PLAT-plant-stress protein | HC |
           chr8:37963076-37962012 | 20130731
          Length = 195

 Score =  300 bits (767), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 143/177 (80%), Positives = 152/177 (85%), Gaps = 1/177 (0%)

Query: 2   ASTTAFIALLVLLSLSFAGTARSGSDDADCVYTVYVRTGSVLKGGTDSKIGIKLYDKYGY 61
            +TT F AL+ L SLSF  T RS SD+ DCVYTVYVRTGS+LKGGTDSKIG+KLYDKYGY
Sbjct: 3   TTTTIFTALIFLFSLSFTTTVRSDSDN-DCVYTVYVRTGSILKGGTDSKIGVKLYDKYGY 61

Query: 62  YIYIKNLESWGGLMGSGYNYFERGNLDIFSGRGPCLEAPVCAVNVTSDGYGDHHGWYANY 121
           YIYIKNLESWGGLMGSG+NYFERGNLDIFSGRGPCLE PVCAVNVTSDG G HHGWY NY
Sbjct: 62  YIYIKNLESWGGLMGSGFNYFERGNLDIFSGRGPCLEGPVCAVNVTSDGDGPHHGWYCNY 121

Query: 122 VEVTSTGAHISCSQEQFEIEQWLATDTSPYQLWAVRNYCRNSLDQARLKTGHEVRTR 178
           VEVTSTG H+SCSQEQF +EQWLATDTSPYQLW+VRN C   LDQAR KTG  V  R
Sbjct: 122 VEVTSTGPHVSCSQEQFTVEQWLATDTSPYQLWSVRNLCHYKLDQARPKTGAPVHHR 178


>Medtr3g087510.1 | PLAT-plant-stress protein | HC |
           chr3:39668097-39666854 | 20130731
          Length = 189

 Score =  249 bits (637), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 115/145 (79%), Positives = 125/145 (86%)

Query: 26  SDDADCVYTVYVRTGSVLKGGTDSKIGIKLYDKYGYYIYIKNLESWGGLMGSGYNYFERG 85
           S+D DCVYTVYVRTGS+ KGGTDS IG+KLYD YGY IYIKNLE WGGLMG  YNY+ERG
Sbjct: 24  SEDEDCVYTVYVRTGSIFKGGTDSIIGLKLYDSYGYGIYIKNLELWGGLMGPDYNYYERG 83

Query: 86  NLDIFSGRGPCLEAPVCAVNVTSDGYGDHHGWYANYVEVTSTGAHISCSQEQFEIEQWLA 145
           NLDIFSG+GPCLE PVCAVN+TSDG G HHGWY NYVEVTSTG HI C+Q+QFE+EQWLA
Sbjct: 84  NLDIFSGKGPCLEGPVCAVNLTSDGSGPHHGWYCNYVEVTSTGVHIPCAQQQFEVEQWLA 143

Query: 146 TDTSPYQLWAVRNYCRNSLDQARLK 170
           TDTSPY+L AVRNYC N L Q R K
Sbjct: 144 TDTSPYELSAVRNYCPNDLSQTRHK 168


>Medtr3g087490.1 | PLAT-plant-stress protein | HC |
           chr3:39663898-39662546 | 20130731
          Length = 191

 Score =  229 bits (584), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/155 (69%), Positives = 127/155 (81%), Gaps = 1/155 (0%)

Query: 30  DCVYTVYVRTGSVLKGGTDSKIGIKLYDKYGYYIYIKNLESWGGLMGSGYNYFERGNLDI 89
           DCVYTVYVRTGS++K GTDS + + LY+  GY I I++LE+WGGLMGSGYNYFERGNLDI
Sbjct: 26  DCVYTVYVRTGSIIKAGTDSIMTLTLYNADGYGILIRDLEAWGGLMGSGYNYFERGNLDI 85

Query: 90  FSGRGPCLEAPVCAVNVTSDGYGDHHGWYANYVEVTSTGAHISCSQEQFEIEQWLATDTS 149
           FSGRGPCL+ PVC +N+TSDG G HHGWY NYVEVT+TGAHI C+Q+QFE+EQWLATDTS
Sbjct: 86  FSGRGPCLDGPVCNMNLTSDGSGSHHGWYCNYVEVTTTGAHIPCAQQQFEVEQWLATDTS 145

Query: 150 PYQLWAVRNYCR-NSLDQARLKTGHEVRTRSESGS 183
           PY+L A+RN C+ N+L QA  K        SESGS
Sbjct: 146 PYELSAIRNNCQYNNLGQAHHKLKTVDAVSSESGS 180


>Medtr4g036345.1 | PLAT-plant-stress protein | LC |
           chr4:13087228-13088016 | 20130731
          Length = 165

 Score =  174 bits (441), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 78/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 27  DDADCVYTVYVRTGSVLKGGTDSKIGIKLYDKYGYYIYIKNLESWGGLMGSGYNYFERGN 86
           D  +CVYT+YV+TGS++KGGTDSKI I+  D     ++I NL+SWG  MG G+NYFERGN
Sbjct: 22  DSNECVYTIYVKTGSIIKGGTDSKISIRFDDAKNQSVWIPNLKSWGA-MGEGHNYFERGN 80

Query: 87  LDIFSGRGPCLEAPVCAVNVTSDGYGDHHGWYANYVEVTSTGAHISCSQEQFEIEQWLAT 146
           +D F+GRGPC+ + VC +N+ SDG G HHGWY +YVEVTSTG H  CSQ  F ++QWLA 
Sbjct: 81  VDAFTGRGPCINSRVCRLNLASDGSGYHHGWYCDYVEVTSTGPHKPCSQTIFYVDQWLAK 140

Query: 147 DTSPYQLWAVRNYCR 161
           D +PY L  + + CR
Sbjct: 141 DVAPYNLSVIIDRCR 155