Miyakogusa Predicted Gene

Lj4g3v2803790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2803790.1 Non Characterized Hit- tr|D8RYS8|D8RYS8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.03,0.000000000001,seg,NULL; Mitofilin,Mitochondrial inner
membrane protein Mitofilin; coiled-coil,NULL,CUFF.51680.1
         (560 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g091480.1 | inner membrane protein | HC | chr8:38181763-38...   414   e-115

>Medtr8g091480.1 | inner membrane protein | HC |
           chr8:38181763-38172937 | 20130731
          Length = 764

 Score =  414 bits (1063), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 254/525 (48%), Positives = 295/525 (56%), Gaps = 71/525 (13%)

Query: 14  TVRRDPRYFVNQKIPSHLSSRKNFSNASKPDGASPPGSTGKAPESNSSLPRF-LIGSCAL 72
           + R +PRYF NQKIPSHLSS+K FSNASKP GAS   STGK PES+ S  +F LIG   +
Sbjct: 134 SFRTNPRYFSNQKIPSHLSSQKKFSNASKPAGASASDSTGKPPESHGSKSKFFLIGGAGV 193

Query: 73  GAAFLATYQTGYLDKYLKKEPQSVSQKAHANATTGDLKSVQHSKDESVSPSVETLNNGNI 132
            A  LA YQ G+LDKY++KE  SV Q+A  + T GDL+S QHS +E VSP+ E  NN N 
Sbjct: 194 SAVLLAAYQFGFLDKYVEKEKLSVPQEAQIDGTVGDLESGQHSIEELVSPTSEKSNNENP 253

Query: 133 VFDHAEQKTDTHFSQPEIVIEDQGDKPIHVQDKYDISEDGGAASEKDQLPEYPQRNLTSD 192
             +HAEQK D H SQPEIVIED  DKPI VQD                         TSD
Sbjct: 254 AVEHAEQKADAHLSQPEIVIEDSSDKPIPVQD-------------------------TSD 288

Query: 193 DPSKESVVQSDGIVGIKSTETDPSKESMVQSDGIKSTEIDLSKESMVQSDGFVAIKSTET 252
                  +  D   G K  +   + +S + SD +                          
Sbjct: 289 -------IAEDHNAGAKENQFPENPQSSLTSDNL-------------------------- 315

Query: 253 DPSKEFVVQSDGIVGIKSTESDISPRLEEEVGTQHRSTSTQASAVPDENGIKNIQPNHQE 312
             SKE VVQSDG VGIKSTE+D++  LE E   QH S S Q +   DENG +NIQP  QE
Sbjct: 316 --SKESVVQSDGTVGIKSTEADVT--LEPEEAIQHTSPSKQDNTFLDENGTENIQPKQQE 371

Query: 313 IEEIRENVLDNDIEQP-NLLEEYHLRNKSEGSPATYLHGHGFIENS--TEEKEALTGAME 369
           IEE RENVL  DIEQP  LLEEYH+RNKSEG+        G  ENS   EEKEA +GA E
Sbjct: 372 IEERRENVLVKDIEQPPTLLEEYHIRNKSEGTTPI-----GLTENSHFPEEKEAFSGATE 426

Query: 370 ELKDGYVSKDGKLVLDFLQAIHAAEKRQADLDAHVFNXXXXXXXXXXXXXXXDXXXXXXX 429
           +LKDGYV+KDGK+ LDF+QAIHAAEKRQA +DAH FN               D       
Sbjct: 427 DLKDGYVAKDGKVALDFVQAIHAAEKRQAGIDAHAFNEEKKALKEKYEKKLKDAAAKELM 486

Query: 430 XXXXXXXXDXXXXXXXXXXXXXXXXXQEKMEQKLKIELDQKETEAELKLQNVQXXXXXXX 489
                   D                 QEKM++KLKIEL+QK+ EAE  L+  Q       
Sbjct: 487 LAEETAMLDRELKRERAKAALAIKSLQEKMDEKLKIELEQKKIEAEENLKKNQELAQAEL 546

Query: 490 XXXXXXXXXXQIEKMAEANININALCMAFYARSEEARQSHAAQIF 534
                     Q+EKM+EANININALCMAFYARSEEARQSHAAQ F
Sbjct: 547 NAAIAKEKAAQLEKMSEANININALCMAFYARSEEARQSHAAQSF 591