Miyakogusa Predicted Gene

Lj4g3v2789340.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2789340.1 Non Characterized Hit- tr|C5XW36|C5XW36_SORBI
Putative uncharacterized protein Sb04g004670
OS=Sorghu,28.85,3e-18,FtsH protease domain-like,NULL;
seg,NULL,CUFF.51670.1
         (330 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g066060.1 | plant/F14G9-20 protein | HC | chr2:27680062-27...    92   8e-19
Medtr7g114070.1 | stress regulated protein | HC | chr7:47041147-...    72   8e-13

>Medtr2g066060.1 | plant/F14G9-20 protein | HC |
           chr2:27680062-27672085 | 20130731
          Length = 392

 Score = 92.0 bits (227), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 9/168 (5%)

Query: 164 AIGSFSTVFPDYQERIARHEAAHFLIAYLLGVPILGYSLDI---------GKEHVNLIDQ 214
            +   S+ +P Y+ RI  HEA H LIAYL+G PI G  LD          G+      D+
Sbjct: 220 CLAQISSYWPPYRRRILIHEAGHLLIAYLMGCPIRGVILDPIVAMQMGIQGQAGTQFWDE 279

Query: 215 RLEKLIYSGQLNAKEIDRLAVVSMAGLAAEGLIYDKVIGQSADLFTLQRFINRTKPQLSK 274
           ++   +  G+L+    DR  +V  AG+AAE LIY +  G   D    +      +P LS 
Sbjct: 280 KVASDLAEGRLDGSAFDRYCMVLFAGIAAEALIYGEAEGGENDENLFRSVCLLLEPPLSV 339

Query: 275 DQQQNLTRWAVMFAASLLKNNKESHEALMASMTKKASVVECIQTIESV 322
            +  N  RW+V+ + +LLK +K +H+A + ++    S+   I+ IE  
Sbjct: 340 AEMSNQARWSVLQSYNLLKWHKAAHQAAVKALESGGSLSTVIRRIEET 387


>Medtr7g114070.1 | stress regulated protein | HC |
           chr7:47041147-47044191 | 20130731
          Length = 340

 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 13/158 (8%)

Query: 175 YQERIARHEAAHFLIAYLLGVPILGYSLD-----IGKEHVNL------IDQRLEKLIYSG 223
           Y  R+ +HEA HFLIAYL+G+   GY+L      + +  +N+      +D    + + SG
Sbjct: 178 YHNRVIQHEAGHFLIAYLVGILPKGYTLSSLDGMMKEGSLNIQAGTAFVDFEFLEEVNSG 237

Query: 224 QLNAKEIDRLAVVSMAGLAAEGLIYDKVIGQSADLFTLQRFINRTKPQLSKDQQQNLTRW 283
           +++A  +++ + +++AG+  E LIY    G   D+  L   +N       K   Q   RW
Sbjct: 238 KVSATTLNKFSCIALAGVCTEYLIYGFSEGGLDDIRKLDSLLNGLGFTQKKADSQ--VRW 295

Query: 284 AVMFAASLLKNNKESHEALMASMTKKASVVECIQTIES 321
           +V+    LL+ ++ +   L  +M+  +SV  CI  IE+
Sbjct: 296 SVLNTVLLLRRHEAARSKLAEAMSMGSSVGSCIDIIEN 333