Miyakogusa Predicted Gene
- Lj4g3v2787000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2787000.1 tr|D3TN66|D3TN66_GLOMM GTP-binding protein SEC4
OS=Glossina morsitans morsitans PE=2 SV=1,29.58,9e-19,RAB,NULL;
seg,NULL; SIGMA54_INTERACT_1,Sigma-54 interaction domain, ATP-binding
site 1; Rab subfamil,CUFF.51642.1
(339 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g091980.1 | Ras-related small GTP-binding family protein |... 466 e-131
Medtr8g091980.2 | Ras-related small GTP-binding family protein |... 401 e-112
Medtr1g062760.1 | RAB GTPase-like protein A5B | HC | chr1:274958... 64 2e-10
Medtr7g103070.1 | RAB GTPase-like protein C2B | HC | chr7:414408... 64 2e-10
Medtr4g069850.1 | RAB GTPase-like protein A1D | HC | chr4:262765... 63 5e-10
Medtr1g029450.1 | small GTPase family RAB protein | HC | chr1:10... 61 1e-09
Medtr8g006970.1 | RAB GTPase-like protein A5D | HC | chr8:114796... 60 3e-09
Medtr4g012940.1 | RAB GTPase-like protein A1D | HC | chr4:346608... 60 3e-09
Medtr8g093740.1 | RAB GTPase-like protein A5B | HC | chr8:392232... 60 4e-09
Medtr8g093740.2 | RAB GTPase-like protein A5B | HC | chr8:392232... 60 4e-09
Medtr8g006970.2 | RAB GTPase-like protein A5D | HC | chr8:114871... 59 8e-09
Medtr3g096350.1 | small GTPase family RAB protein | HC | chr3:44... 58 1e-08
Medtr2g101890.1 | RAB GTPase-like protein A1D | HC | chr2:438414... 58 1e-08
Medtr1g090717.1 | RAB GTPase-like protein A5B | HC | chr1:407164... 58 1e-08
Medtr8g036220.1 | RAB GTPase-like protein A1D | HC | chr8:133937... 58 2e-08
Medtr3g096350.2 | small GTPase family RAB protein | HC | chr3:44... 56 4e-08
Medtr3g096350.3 | small GTPase family RAB protein | HC | chr3:44... 56 5e-08
Medtr7g081700.1 | RAB GTPase-like protein B1C | HC | chr7:312287... 56 5e-08
Medtr1g097420.1 | RAB GTPase-like protein A1D | HC | chr1:439465... 55 1e-07
Medtr5g076590.1 | small GTPase family RAB protein | HC | chr5:32... 55 1e-07
Medtr2g102060.1 | small GTPase family RAB protein | HC | chr2:43... 55 1e-07
Medtr8g092020.1 | RAB GTPase-like protein A1D | HC | chr8:384078... 54 2e-07
Medtr7g117910.1 | small GTPase family RAB protein | HC | chr7:48... 54 2e-07
Medtr8g027220.1 | Ras-related small GTP-binding family protein |... 54 2e-07
Medtr1g068740.1 | RAB GTPase-like protein A5B | HC | chr1:293521... 54 2e-07
Medtr1g068730.1 | RAB GTPase-like protein A5B | HC | chr1:293444... 54 2e-07
Medtr1g068740.2 | RAB GTPase-like protein A5B | HC | chr1:293521... 54 3e-07
Medtr3g069510.1 | RAB GTPase-like protein A1D | HC | chr3:310902... 54 3e-07
Medtr0262s0050.1 | RAB GTPase-like protein A1D | HC | scaffold02... 54 3e-07
Medtr7g100020.2 | RAB GTPase-like protein A5B | HC | chr7:401949... 54 3e-07
Medtr7g100020.1 | RAB GTPase-like protein A5B | HC | chr7:401949... 54 3e-07
Medtr3g064390.1 | small GTPase family RAB protein | HC | chr3:28... 53 3e-07
Medtr1g115325.1 | RAB GTPase-like protein A5B | HC | chr1:520310... 53 4e-07
Medtr1g068730.2 | RAB GTPase-like protein A5B | HC | chr1:293444... 53 5e-07
Medtr1g052475.1 | RAB GTPase-like protein A1D | HC | chr1:213364... 53 5e-07
Medtr1g078200.1 | RAB GTPase-like protein C2B | HC | chr1:349987... 52 6e-07
Medtr8g103550.1 | RAB GTPase-like protein A5B | HC | chr8:435755... 52 7e-07
Medtr2g083860.1 | RAB GTPase-like protein A1D | HC | chr2:351953... 52 1e-06
Medtr2g014990.1 | RAB GTPase-like protein A1D | HC | chr2:437551... 51 1e-06
Medtr7g051940.1 | RAB GTPase-like protein A1D | HC | chr7:182342... 51 2e-06
Medtr4g088090.1 | RAB GTPase-like protein A1D | HC | chr4:346993... 51 2e-06
Medtr4g064897.1 | RAB GTPase-like protein A1D | HC | chr4:242499... 51 2e-06
Medtr4g079350.1 | RAB GTPase-like protein C2B | HC | chr4:306486... 51 2e-06
Medtr3g064390.2 | small GTPase family RAB protein | HC | chr3:28... 51 2e-06
Medtr2g005510.1 | RAB GTPase-like protein A1D | HC | chr2:188783... 50 3e-06
Medtr8g089985.1 | RAB GTPase-like protein A1D | HC | chr8:376274... 50 3e-06
Medtr1g094220.4 | small GTPase family RAB protein | HC | chr1:42... 50 3e-06
Medtr2g075950.1 | RAB GTPase-like protein A1D | HC | chr2:317892... 50 3e-06
Medtr1g094220.1 | small GTPase family RAB protein | HC | chr1:42... 50 4e-06
Medtr3g086980.1 | RAB GTPase-like protein A1D | HC | chr3:394347... 50 4e-06
Medtr1g094220.5 | small GTPase family RAB protein | HC | chr1:42... 50 4e-06
Medtr1g094220.2 | small GTPase family RAB protein | HC | chr1:42... 50 4e-06
Medtr8g107070.1 | RAB GTPase-like protein A2D | HC | chr8:452338... 49 5e-06
Medtr6g079550.1 | RAB GTPase-like protein A1D | HC | chr6:300135... 49 7e-06
Medtr1g094220.3 | small GTPase family RAB protein | HC | chr1:42... 49 7e-06
>Medtr8g091980.1 | Ras-related small GTP-binding family protein | HC
| chr8:38387080-38381306 | 20130731
Length = 342
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/346 (70%), Positives = 259/346 (74%), Gaps = 11/346 (3%)
Query: 1 MFWRDRERESNKELNGGVLCGQVRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVD 60
MFWR+RERE NKE NGGVLCGQVRVLVVGDSGVGK+SLVHLIVKGSP+ RP QTIGCTVD
Sbjct: 1 MFWRERERE-NKEHNGGVLCGQVRVLVVGDSGVGKSSLVHLIVKGSPIARPSQTIGCTVD 59
Query: 61 VKHTTYGNXXXXXXXXXXXXERNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQR 120
VKHTTYGN ER+FFVELWDVSGHERY+DCRSLFYSQINGVIFVHDLSQR
Sbjct: 60 VKHTTYGNSGSSSSSLKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQR 119
Query: 121 RTKTSLQKWAAEISATGTFSAXXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDV 180
RTKTSLQKWAAEI+ATGTFSA YIVIGNKADI AKEG RGSSGNLVDV
Sbjct: 120 RTKTSLQKWAAEIAATGTFSAPLGSGGPGGLPVPYIVIGNKADIVAKEGARGSSGNLVDV 179
Query: 181 ARQWVEKQGXXXXXXXXXXXXXXXGSGGLIAAAKEARYDKEGVMKFFRMLIRRRYFSDEL 240
ARQWVEKQG G GGLIAAAKEARYDKE V+KFFRMLIRRRYFSDE+
Sbjct: 180 ARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVIKFFRMLIRRRYFSDEI 239
Query: 241 PEPAWSIPSVQRPAQ-------QRIDDSFIEDDNQSYNTRRSLSSDPFKYNMLPPLPAQR 293
P P WSIPS QR +Q QRID+SFI DD+QSYN R SSDP+KYNMLPPLPAQR
Sbjct: 240 PAPTWSIPSPQRSSQRIDEISSQRIDESFI-DDDQSYNAGR--SSDPYKYNMLPPLPAQR 296
Query: 294 NXXXXXXXXXXXXVSVSENYSFPRFXXXXXXXXXXXARTKRSDINV 339
N VSVSE+YS+PRF +RTKRSDINV
Sbjct: 297 NLTPPPTLYPQQPVSVSESYSYPRFSLSGSSEMSASSRTKRSDINV 342
>Medtr8g091980.2 | Ras-related small GTP-binding family protein | HC
| chr8:38387080-38381306 | 20130731
Length = 284
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/279 (74%), Positives = 218/279 (78%), Gaps = 9/279 (3%)
Query: 1 MFWRDRERESNKELNGGVLCGQVRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVD 60
MFWR+RERE NKE NGGVLCGQVRVLVVGDSGVGK+SLVHLIVKGSP+ RP QTIGCTVD
Sbjct: 1 MFWRERERE-NKEHNGGVLCGQVRVLVVGDSGVGKSSLVHLIVKGSPIARPSQTIGCTVD 59
Query: 61 VKHTTYGNXXXXXXXXXXXXERNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQR 120
VKHTTYGN ER+FFVELWDVSGHERY+DCRSLFYSQINGVIFVHDLSQR
Sbjct: 60 VKHTTYGNSGSSSSSLKGDSERDFFVELWDVSGHERYKDCRSLFYSQINGVIFVHDLSQR 119
Query: 121 RTKTSLQKWAAEISATGTFSAXXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDV 180
RTKTSLQKWAAEI+ATGTFSA YIVIGNKADI AKEG RGSSGNLVDV
Sbjct: 120 RTKTSLQKWAAEIAATGTFSAPLGSGGPGGLPVPYIVIGNKADIVAKEGARGSSGNLVDV 179
Query: 181 ARQWVEKQGXXXXXXXXXXXXXXXGSGGLIAAAKEARYDKEGVMKFFRMLIRRRYFSDEL 240
ARQWVEKQG G GGLIAAAKEARYDKE V+KFFRMLIRRRYFSDE+
Sbjct: 180 ARQWVEKQGLLPSSEELPLTESFPGGGGLIAAAKEARYDKEAVIKFFRMLIRRRYFSDEI 239
Query: 241 PEPAWSIPSVQRPAQ-------QRIDDSFIEDDNQSYNT 272
P P WSIPS QR +Q QRID+SFI DD+QSYN
Sbjct: 240 PAPTWSIPSPQRSSQRIDEISSQRIDESFI-DDDQSYNA 277
>Medtr1g062760.1 | RAB GTPase-like protein A5B | HC |
chr1:27495849-27498608 | 20130731
Length = 211
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
++L++GDS VGK+SL+ + GS V P TIG +K T G +
Sbjct: 16 KILLIGDSAVGKSSLLVSFISGS-VEDPAPTIGVDFKIKLLTVGG-------------KR 61
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQK-WAAEISATGTFSAX 142
+ +WD +G ER++ S +Y G+I V+D+++R T T+L + W+ E+ T
Sbjct: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKEVELYST---- 117
Query: 143 XXXXXXXXXXXXYIVIGNKAD------IAAKEGI 170
+++GNK D ++ +EG+
Sbjct: 118 -------NQDCMKMLVGNKVDRESERTVSTEEGL 144
>Medtr7g103070.1 | RAB GTPase-like protein C2B | HC |
chr7:41440857-41436532 | 20130731
Length = 214
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 25/141 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
++L++GDSGVGK+ L+ + S V TIG +K T G +
Sbjct: 18 KILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGG-------------KR 64
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQK-WAAEISATGTFSAX 142
+ +WD +G ER++ S +Y G+I V+D+++R T T+L + W+ E+ T
Sbjct: 65 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYST---- 120
Query: 143 XXXXXXXXXXXXYIVIGNKAD 163
+++GNK D
Sbjct: 121 -------NQECVKMLVGNKVD 134
>Medtr4g069850.1 | RAB GTPase-like protein A1D | HC |
chr4:26276568-26272817 | 20130731
Length = 206
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
++V+++GDSGVGKTSL++ V + + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
F +++WD +G ER+Q FY + + V+D++ ++ +L W E S
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPS-- 113
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
++VIGNK DI
Sbjct: 114 ------DPENFPFVVIGNKIDI 129
>Medtr1g029450.1 | small GTPase family RAB protein | HC |
chr1:10110413-10114701 | 20130731
Length = 215
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
++L++GDSGVGK++L+ L TIG VK+ T G +
Sbjct: 19 KLLMIGDSGVGKSTLL-LRFTSDNFEDLSPTIGVDFKVKYVTLGG-------------KK 64
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQK-WAAEISATGTFSAX 142
+ +WD +G ER++ +Y G+I V+D+++R T T+L WA EI T
Sbjct: 65 LKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYST---- 120
Query: 143 XXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQW 184
+++GNK D ++ + + VD ARQ+
Sbjct: 121 -------NQDCIKMLVGNKVDKESERAV--TKKEAVDFARQY 153
>Medtr8g006970.1 | RAB GTPase-like protein A5D | HC |
chr8:1147960-1144960 | 20130731
Length = 217
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 33/202 (16%)
Query: 18 VLCGQ--VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXX 75
VLC ++L++GDSGVGK+ L+ S + TIG VD K T
Sbjct: 16 VLCSDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIG--VDFKIRT---------- 63
Query: 76 XXXXXERNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISA 135
+ +++WD +G ER++ S +Y +G+I V+D++ + ++++W +EI
Sbjct: 64 -VEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDR 122
Query: 136 TGTFSAXXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQGXXXXXX 195
+ + +++GNK+D+ A + D A+++ ++ G
Sbjct: 123 YASDNVNK------------LLVGNKSDLTANRAVS------YDTAKEFADQIGIPFMET 164
Query: 196 XXXXXXXXXGSGGLIAAAKEAR 217
G+ +AAA + R
Sbjct: 165 SAKDATNVEGAFMAMAAAIKDR 186
>Medtr4g012940.1 | RAB GTPase-like protein A1D | HC |
chr4:3466085-3469888 | 20130731
Length = 207
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
++V+++GDSGVGKTSL++ V + + TIG K + +R
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF-------------EDR 55
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
F +++WD +G ER+Q FY + + V+D++ ++ +L W E + S
Sbjct: 56 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPS-- 113
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
++V+GNK D+
Sbjct: 114 ------DPENFPFVVLGNKIDV 129
>Medtr8g093740.1 | RAB GTPase-like protein A5B | HC |
chr8:39223227-39227011 | 20130731
Length = 208
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 40/168 (23%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
++L++GDSGVGK+SL+ L TIG VK+ T +
Sbjct: 15 KLLMIGDSGVGKSSLL-LRFTSDDFDDLSPTIGVDFKVKYVTIEG-------------KK 60
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQK-WAAEISATGTFSAX 142
+ +WD +G ER++ S +Y G+I V+D+++R T T+L + WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYST---- 116
Query: 143 XXXXXXXXXXXXYIVIGNKAD------IAAKEGIRGSSGNLVDVARQW 184
+++GNK D + KEGI D AR++
Sbjct: 117 -------NQDCMKMLVGNKVDKEGDRVVTKKEGI--------DFAREY 149
>Medtr8g093740.2 | RAB GTPase-like protein A5B | HC |
chr8:39223240-39227053 | 20130731
Length = 208
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 40/168 (23%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
++L++GDSGVGK+SL+ L TIG VK+ T +
Sbjct: 15 KLLMIGDSGVGKSSLL-LRFTSDDFDDLSPTIGVDFKVKYVTIEG-------------KK 60
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQK-WAAEISATGTFSAX 142
+ +WD +G ER++ S +Y G+I V+D+++R T T+L + WA EI T
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYST---- 116
Query: 143 XXXXXXXXXXXXYIVIGNKAD------IAAKEGIRGSSGNLVDVARQW 184
+++GNK D + KEGI D AR++
Sbjct: 117 -------NQDCMKMLVGNKVDKEGDRVVTKKEGI--------DFAREY 149
>Medtr8g006970.2 | RAB GTPase-like protein A5D | HC |
chr8:1148710-1145036 | 20130731
Length = 181
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 31/194 (15%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
++L++GDSGVGK+ L+ S + TIG VD K T +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIDSYISTIG--VDFKIRT-----------VEQDGKT 56
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
+++WD +G ER++ S +Y +G+I V+D++ + ++++W +EI + +
Sbjct: 57 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNK 116
Query: 144 XXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQGXXXXXXXXXXXXXX 203
+++GNK+D+ A + D A+++ ++ G
Sbjct: 117 ------------LLVGNKSDLTANRAVS------YDTAKEFADQIGIPFMETSAKDATNV 158
Query: 204 XGSGGLIAAAKEAR 217
G+ +AAA + R
Sbjct: 159 EGAFMAMAAAIKDR 172
>Medtr3g096350.1 | small GTPase family RAB protein | HC |
chr3:44038043-44043862 | 20130731
Length = 207
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
++L++GDSGVGK+SL+ L TIG VK+ T +
Sbjct: 14 KLLMIGDSGVGKSSLL-LCFTSDSFENLSPTIGVDFKVKYFTIDG-------------KK 59
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQK-WAAEISATGTFSAX 142
+ +WD +G ER++ S +Y G+I +D+++R T T+L + WA E+ T
Sbjct: 60 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYST---- 115
Query: 143 XXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQW 184
+++GNK D + + G +D AR++
Sbjct: 116 -------NQDCIKMLVGNKVDKESDRVVTKKEG--IDFAREY 148
>Medtr2g101890.1 | RAB GTPase-like protein A1D | HC |
chr2:43841412-43838102 | 20130731
Length = 209
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
++V+++GDSGVGKTSL++ V + + TIG K +R
Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEV-------------QVEDR 57
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
F +++WD +G ER+Q FY + + V+D++ ++ +L W E + S
Sbjct: 58 LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPS-- 115
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
++V+GNK D+
Sbjct: 116 ------DPENFPFVVLGNKVDV 131
>Medtr1g090717.1 | RAB GTPase-like protein A5B | HC |
chr1:40716435-40711176 | 20130731
Length = 212
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 24 RVLVVGDSGVGKTSLV-HLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
+VL++GDSGVGK+SL+ I + + TIG +K T G ++
Sbjct: 17 KVLLIGDSGVGKSSLLLSFISNANSLDDLSPTIGVDFKIKLFTIG-------------DK 63
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSL-QKWAAEISATGTFSA 141
+ +WD +G ER+ +Y +G++ V+D+++R T T+L WA E+ G +S
Sbjct: 64 RLKLTIWDTAGQERFGTVICSYYRGAHGIVLVYDVTRRETFTNLVGTWAKEV---GLYST 120
Query: 142 XXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSG 175
I++GNK D ++ + G
Sbjct: 121 NHDCIK--------ILVGNKVDKESERAVSKEEG 146
>Medtr8g036220.1 | RAB GTPase-like protein A1D | HC |
chr8:13393739-13391340 | 20130731
Length = 229
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 25/143 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+V+++GDSGVGK+ L++ V+ + + TIG K +
Sbjct: 18 KVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLVK----------- 66
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ERYQ + +Y G + +D+++R T ++KW E+
Sbjct: 67 --AQIWDTAGQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELH--------- 115
Query: 144 XXXXXXXXXXXYIVIGNKADIAA 166
+++GNK+D+++
Sbjct: 116 ---NHADKNIVVMLVGNKSDLSS 135
>Medtr3g096350.2 | small GTPase family RAB protein | HC |
chr3:44038043-44042591 | 20130731
Length = 156
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
++L++GDSGVGK+SL+ L TIG VK+ T +
Sbjct: 14 KLLMIGDSGVGKSSLL-LCFTSDSFENLSPTIGVDFKVKYFTIDG-------------KK 59
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQK-WAAEISATGT 138
+ +WD +G ER++ S +Y G+I +D+++R T T+L + WA E+ T
Sbjct: 60 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYST 115
>Medtr3g096350.3 | small GTPase family RAB protein | HC |
chr3:44038043-44042644 | 20130731
Length = 149
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
++L++GDSGVGK+SL+ L TIG VK+ T +
Sbjct: 14 KLLMIGDSGVGKSSLL-LCFTSDSFENLSPTIGVDFKVKYFTIDG-------------KK 59
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQK-WAAEISATGT 138
+ +WD +G ER++ S +Y G+I +D+++R T T+L + WA E+ T
Sbjct: 60 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYST 115
>Medtr7g081700.1 | RAB GTPase-like protein B1C | HC |
chr7:31228785-31232855 | 20130731
Length = 202
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
++L++GDSGVGK+ L+ S + TIG VD K T +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYIDSYISTIG--VDFKIRT-----------VEQDGKT 56
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
+++WD +G ER++ S +Y +G+I V+D++ + ++++W +EI + +
Sbjct: 57 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNK 116
Query: 144 XXXXXXXXXXXYIVIGNKADIAAKEGI 170
+++GNK D+ ++ +
Sbjct: 117 ------------LLVGNKCDLTSERAV 131
>Medtr1g097420.1 | RAB GTPase-like protein A1D | HC |
chr1:43946590-43951820 | 20130731
Length = 207
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 21/142 (14%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
++V+V+GDSGVGKTSL++ V + + TIG K +R
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEL-------------QIDDR 55
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
+++WD +G ER+Q FY + + +D++ R+ SL W E
Sbjct: 56 LVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMRSFDSLDTWHEEF--------L 107
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
+I++GNK DI
Sbjct: 108 KQANPPDTRAFPFILLGNKIDI 129
>Medtr5g076590.1 | small GTPase family RAB protein | HC |
chr5:32675525-32681053 | 20130731
Length = 200
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 31/166 (18%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+++++GD G GK+SLV VKG + + TIG + +
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK----------- 60
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
E+WD +G ERY ++Y I V+D++ + T +KW E+ G
Sbjct: 61 --FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGN----- 113
Query: 144 XXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQG 189
GNKAD+ K + AR + E+ G
Sbjct: 114 -------PNMVVAFAGNKADLEDKRKVTAEE------ARVYAEENG 146
>Medtr2g102060.1 | small GTPase family RAB protein | HC |
chr2:43921046-43919465 | 20130731
Length = 200
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 25/154 (16%)
Query: 22 QVRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXE 81
Q +++++GD G GKTSL VKG + TIG + + E
Sbjct: 10 QAKLVLLGDMGTGKTSLALRFVKGQFFQNQEPTIGAAFFTQILSL-------------SE 56
Query: 82 RNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSA 141
++WD +G ERY ++Y I V+D+S T +KW E+ G+
Sbjct: 57 ATVKFDIWDTAGQERYHSLAPMYYRGAAAAIVVYDISSIDTFVRAKKWVQELQRHGS--- 113
Query: 142 XXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSG 175
++ NK D+ K + G
Sbjct: 114 ---------QKLVMALVANKCDLEPKREVETEDG 138
>Medtr8g092020.1 | RAB GTPase-like protein A1D | HC |
chr8:38407885-38409949 | 20130731
Length = 209
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 31/170 (18%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
++V+V+GDSGVGKTSL++ V + + TIG K +
Sbjct: 13 LKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVT---------- 62
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEI---SATGTF 139
+++WD +G ER+ + FY + + V+D++ +T +L W + + TG
Sbjct: 63 ---LQIWDTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNP 119
Query: 140 SAXXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQG 189
A ++++GNK D+ R + AR+W +G
Sbjct: 120 DA-----------FPFVLLGNKVDVDGGNSRRVTEKK----AREWCASRG 154
>Medtr7g117910.1 | small GTPase family RAB protein | HC |
chr7:48931651-48932623 | 20130731
Length = 212
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 25/142 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+V+V+GDS VGKT ++ K + TIG + T
Sbjct: 22 KVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIK----------- 70
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ERY+ S +Y G + V+D+++R+T + +W E+ + S
Sbjct: 71 --AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWIEELRSHADNSI-- 126
Query: 144 XXXXXXXXXXXYIVIGNKADIA 165
++IGNK D+
Sbjct: 127 ----------VIMLIGNKGDLV 138
>Medtr8g027220.1 | Ras-related small GTP-binding family protein | HC
| chr8:9528022-9525895 | 20130731
Length = 232
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+V+V+GDS VGKT ++ K + TIG + T +
Sbjct: 28 KVVVIGDSAVGKTQILSRFSKNEFCFDSKSTIGVEFQTRTVTING-------------KV 74
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ERY+ S +Y G + V+D+++R++ + KW E+ A S
Sbjct: 75 IKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNS--- 131
Query: 144 XXXXXXXXXXXYIVIGNKADI 164
+++GNK D+
Sbjct: 132 ---------IVIMLVGNKGDL 143
>Medtr1g068740.1 | RAB GTPase-like protein A5B | HC |
chr1:29352144-29345511 | 20130731
Length = 216
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
+++L++GDSGVGK+ L+ GS T TIG +D K T +
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--IDFKIRTI-----------ELDGK 62
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
+++WD +G ER++ + +Y G++ V+D++ + +++ W I + +
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVN 122
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
I++GNKAD+
Sbjct: 123 K------------ILVGNKADM 132
>Medtr1g068730.1 | RAB GTPase-like protein A5B | HC |
chr1:29344444-29337634 | 20130731
Length = 216
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
+++L++GDSGVGK+ L+ GS T TIG +D K T +
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--IDFKIRTI-----------ELDGK 62
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
+++WD +G ER++ + +Y G++ V+D++ + +++ W I + +
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVN 122
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
I++GNKAD+
Sbjct: 123 K------------ILVGNKADM 132
>Medtr1g068740.2 | RAB GTPase-like protein A5B | HC |
chr1:29352144-29345511 | 20130731
Length = 197
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
+++L++GDSGVGK+ L+ GS T TIG +D K T +
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--IDFKIRT-----------IELDGK 62
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
+++WD +G ER++ + +Y G++ V+D++ + +++ W I + +
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVN 122
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
I++GNKAD+
Sbjct: 123 K------------ILVGNKADM 132
>Medtr3g069510.1 | RAB GTPase-like protein A1D | HC |
chr3:31090285-31088261 | 20130731
Length = 216
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 23/115 (20%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGC-----TVDVKHTTYGNXXXXXXXXXX 78
+++++GDSGVGK++++ + + TIG T+ V+ T
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVK----------- 62
Query: 79 XXERNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEI 133
++WD +G ERY+ S +Y G + V+D+++R+T ++Q+W E+
Sbjct: 63 -------AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLREL 110
>Medtr0262s0050.1 | RAB GTPase-like protein A1D | HC |
scaffold0262:13029-14834 | 20130731
Length = 222
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 25/142 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+V+++GDS VGKT L+ + + TIG K N +
Sbjct: 17 KVVLIGDSAVGKTQLLGRFARNEFKVDSKATIGVEFQTKTLIIDN-------------KT 63
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ERY+ S +Y G + V+D+++R++ + +W E+ +
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRS-------- 115
Query: 144 XXXXXXXXXXXYIVIGNKADIA 165
++IGNK D++
Sbjct: 116 ----HADKNIVIMLIGNKCDLS 133
>Medtr7g100020.2 | RAB GTPase-like protein A5B | HC |
chr7:40194971-40198587 | 20130731
Length = 216
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
+++L++GDSGVGK+ L+ GS T TIG +D K T +
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--IDFKIRTI-----------ELDGK 62
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
+++WD +G ER++ + +Y G++ V+D++ + +++ W I + +
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
I++GNKAD+
Sbjct: 123 K------------ILVGNKADM 132
>Medtr7g100020.1 | RAB GTPase-like protein A5B | HC |
chr7:40194971-40198610 | 20130731
Length = 216
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
+++L++GDSGVGK+ L+ GS T TIG +D K T +
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--IDFKIRTI-----------ELDGK 62
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
+++WD +G ER++ + +Y G++ V+D++ + +++ W I + +
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
I++GNKAD+
Sbjct: 123 K------------ILVGNKADM 132
>Medtr3g064390.1 | small GTPase family RAB protein | HC |
chr3:28986937-28992404 | 20130731
Length = 200
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
+++++GD G GK+SLV VKG + + TIG + +
Sbjct: 11 AKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK---------- 60
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATG 137
E+WD +G ERY ++Y I V+D++ + + +KW E+ G
Sbjct: 61 ---FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQG 112
>Medtr1g115325.1 | RAB GTPase-like protein A5B | HC |
chr1:52031011-52034310 | 20130731
Length = 215
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
+++L++GDSGVGK+ L+ GS T TIG +D K T +
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--IDFKIRTI-----------ELDGK 62
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
+++WD +G ER++ + +Y G++ V+D++ + +++ W I + +
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVN 122
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
I++GNKAD+
Sbjct: 123 K------------ILVGNKADM 132
>Medtr1g068730.2 | RAB GTPase-like protein A5B | HC |
chr1:29344444-29337634 | 20130731
Length = 171
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 23 VRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXER 82
+++L++GDSGVGK+ L+ GS T TIG +D K T +
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIG--IDFKIRT-----------IELDGK 62
Query: 83 NFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAX 142
+++WD +G ER++ + +Y G++ V+D++ + +++ W I + +
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVN 122
Query: 143 XXXXXXXXXXXXYIVIGNKADI 164
I++GNKAD+
Sbjct: 123 K------------ILVGNKADM 132
>Medtr1g052475.1 | RAB GTPase-like protein A1D | HC |
chr1:21336471-21339658 | 20130731
Length = 223
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 25/147 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+V+++GDS VGKT L+ + + TIG K N +
Sbjct: 17 KVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDN-------------KT 63
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ERY+ S +Y G + V+D+++R++ + +W E+
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRG-------- 115
Query: 144 XXXXXXXXXXXYIVIGNKADIAAKEGI 170
++IGNK D+ + +
Sbjct: 116 ----HADTNIVIMLIGNKCDLGTLKAV 138
>Medtr1g078200.1 | RAB GTPase-like protein C2B | HC |
chr1:34998790-34993821 | 20130731
Length = 224
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 25/141 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+++++GDS VGK++L+ + + TIG + +
Sbjct: 16 KIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING-------------KE 62
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ER++ S +Y G + V+D+S+R+T S+ +W E+ +
Sbjct: 63 VKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVT 122
Query: 144 XXXXXXXXXXXYIVIGNKADI 164
I++GNK+D+
Sbjct: 123 ------------ILVGNKSDL 131
>Medtr8g103550.1 | RAB GTPase-like protein A5B | HC |
chr8:43575571-43573270 | 20130731
Length = 198
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 22 QVRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXE 81
Q +++++GD G GKTSLV VKG + TIG + + E
Sbjct: 9 QAKLVLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLN-------------E 55
Query: 82 RNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEI 133
++WD +G ERY ++Y I V+D++ + +KW E+
Sbjct: 56 ATVKFDIWDTAGQERYHSLAPMYYRGSAAAIVVYDITSMDSFVRAKKWVREV 107
>Medtr2g083860.1 | RAB GTPase-like protein A1D | HC |
chr2:35195372-35201445 | 20130731
Length = 218
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+++++GDSGVGK++L+ + + TIG K T
Sbjct: 15 KLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIK----------- 63
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEI 133
++WD +G ERY+ S +Y G + V+D+++R T + +W E+
Sbjct: 64 --AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKEL 111
>Medtr2g014990.1 | RAB GTPase-like protein A1D | HC |
chr2:4375511-4372352 | 20130731
Length = 217
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+V+++GDSGVGK++L+ K + TIG + +
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVK----------- 63
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ERY+ S +Y G + V+D+++ T ++++W E+
Sbjct: 64 --AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL---------- 111
Query: 144 XXXXXXXXXXXYIVIGNKADI 164
+++GNKAD+
Sbjct: 112 --RDHTDANIVVMLVGNKADL 130
>Medtr7g051940.1 | RAB GTPase-like protein A1D | HC |
chr7:18234251-18230040 | 20130731
Length = 215
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 74/166 (44%), Gaps = 31/166 (18%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+++++GDS VGK++L+ + + + TIG + +
Sbjct: 15 KIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDG-------------KE 61
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ER++ S +Y G + V+D+S+R T S+++W E++ +
Sbjct: 62 VKAQIWDTAGQERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVAR 121
Query: 144 XXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQG 189
+++GNK D+ E IR S ++ + E++G
Sbjct: 122 ------------MLVGNKCDL---ENIREVS---IEEGKALAEEEG 149
>Medtr4g088090.1 | RAB GTPase-like protein A1D | HC |
chr4:34699316-34702141 | 20130731
Length = 217
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+V+++GDSGVGK++L+ K + TIG + +
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVK----------- 63
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ERY+ S +Y G + V+D+++ T ++++W E+
Sbjct: 64 --AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL---------- 111
Query: 144 XXXXXXXXXXXYIVIGNKADI 164
+++GNKAD+
Sbjct: 112 --RDHTDANIVVMLVGNKADL 130
>Medtr4g064897.1 | RAB GTPase-like protein A1D | HC |
chr4:24249982-24247615 | 20130731
Length = 215
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+++++GDSGVGK++++ + + TIG + +
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR-------------TLQVEGKT 60
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEI 133
++WD +G ERY+ S +Y G + V+D+++R+T ++ +W E+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLREL 110
>Medtr4g079350.1 | RAB GTPase-like protein C2B | HC |
chr4:30648654-30646057 | 20130731
Length = 217
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+V+++GDSGVGK++L+ K + TIG + +
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVK----------- 63
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ERY+ S +Y G + V+D+++ T ++++W E+
Sbjct: 64 --AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL---------- 111
Query: 144 XXXXXXXXXXXYIVIGNKADI 164
+++GNKAD+
Sbjct: 112 --RDHTDANIVIMLVGNKADL 130
>Medtr3g064390.2 | small GTPase family RAB protein | HC |
chr3:28986937-28992404 | 20130731
Length = 158
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+++++GD G GK+SLV VKG + + TIG + +
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK----------- 60
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATG 137
E+WD +G ERY ++Y I V+D++ + + +KW E+ G
Sbjct: 61 --FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQG 112
>Medtr2g005510.1 | RAB GTPase-like protein A1D | HC |
chr2:188783-187481 | 20130731
Length = 220
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+V+++GDSGVGK++L+ + + TIG + R
Sbjct: 17 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR-------------TLQVEGRT 63
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ERY+ S +Y G + V+D+++ T ++ +W E+
Sbjct: 64 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKEL---------- 113
Query: 144 XXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQG 189
++IGNK D+ + + A+ + EK+G
Sbjct: 114 --RDHADANIVIMLIGNKTDLKHLRAV------ATEDAQSYAEKEG 151
>Medtr8g089985.1 | RAB GTPase-like protein A1D | HC |
chr8:37627491-37624788 | 20130731
Length = 225
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 41/171 (23%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGC-----TVDVKHTTYGNXXXXXXXXXX 78
+V+++GDS VGK+ ++ + + TIG T+ + H T
Sbjct: 19 KVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVK----------- 67
Query: 79 XXERNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGT 138
++WD +G ERY+ S +Y G + V+D+++R+T + +W E+
Sbjct: 68 -------AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEEL----- 115
Query: 139 FSAXXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQG 189
I++GNK+D+ + + + A+++ EK+G
Sbjct: 116 -------RNHADKNIVIILVGNKSDLENQRDVP------TEDAKEFAEKEG 153
>Medtr1g094220.4 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 208
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 30/168 (17%)
Query: 22 QVRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXE 81
+V+++++GDSGVGK+ +V V+G + T+G + + +
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVK-------- 82
Query: 82 RNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSA 141
E+WD +G ERY L+Y + +D++ + + Q W E+ G+
Sbjct: 83 ----FEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGS--- 135
Query: 142 XXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQG 189
++GNKAD+ K + V+ + EK G
Sbjct: 136 ---------PDIVMALVGNKADLQEKREVA------VEDGMDYAEKNG 168
>Medtr2g075950.1 | RAB GTPase-like protein A1D | HC |
chr2:31789231-31793100 | 20130731
Length = 217
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 25/141 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+V+++GDSGVGK++L+ K + TIG + +
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIK----------- 63
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ERY+ S +Y G + V+D+++ T ++ +W E+
Sbjct: 64 --AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKEL---------- 111
Query: 144 XXXXXXXXXXXYIVIGNKADI 164
+++GNKAD+
Sbjct: 112 --RNHTDSNIVVMLVGNKADL 130
>Medtr1g094220.1 | small GTPase family RAB protein | HC |
chr1:42431733-42425453 | 20130731
Length = 199
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 22 QVRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXE 81
+V+++++GDSGVGK+ +V V+G + T+G + + +
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVK-------- 82
Query: 82 RNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSA 141
E+WD +G ERY L+Y + +D++ + + Q W E+ G+
Sbjct: 83 ----FEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGS--- 135
Query: 142 XXXXXXXXXXXXXYIVIGNKADIAAK 167
++GNKAD+ K
Sbjct: 136 ---------PDIVMALVGNKADLQEK 152
>Medtr3g086980.1 | RAB GTPase-like protein A1D | HC |
chr3:39434756-39431186 | 20130731
Length = 222
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 41/171 (23%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGC-----TVDVKHTTYGNXXXXXXXXXX 78
+V+++GDS VGK+ ++ + + TIG T+ ++H
Sbjct: 18 KVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEH--------------- 62
Query: 79 XXERNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGT 138
++ ++WD +G ERY+ S +Y G + V+D+++R + + +W E+
Sbjct: 63 ---KSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEEL----- 114
Query: 139 FSAXXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQG 189
I+IGNK+D+ + + + A+++ EK+G
Sbjct: 115 -------RNHADKNIVIILIGNKSDLEEQRAVP------TEDAKEFAEKEG 152
>Medtr1g094220.5 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 204
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 40/173 (23%)
Query: 22 QVRVLVVGDSGVGKTSLVHLIVKG-----SPVTRPQQTIGCTVDVKHTTYGNXXXXXXXX 76
+V+++++GDSGVGK+ +V V+G S VT + T+ ++ +T
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDST----------- 79
Query: 77 XXXXERNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISAT 136
E+WD +G ERY L+Y + +D++ + + Q W E+
Sbjct: 80 ------TVKFEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKH 133
Query: 137 GTFSAXXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQG 189
G+ ++GNKAD+ K + V+ + EK G
Sbjct: 134 GS------------PDIVMALVGNKADLQEKREVA------VEDGMDYAEKNG 168
>Medtr1g094220.2 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 204
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 40/173 (23%)
Query: 22 QVRVLVVGDSGVGKTSLVHLIVKG-----SPVTRPQQTIGCTVDVKHTTYGNXXXXXXXX 76
+V+++++GDSGVGK+ +V V+G S VT + T+ ++ +T
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDST----------- 79
Query: 77 XXXXERNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISAT 136
E+WD +G ERY L+Y + +D++ + + Q W E+
Sbjct: 80 ------TVKFEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKH 133
Query: 137 GTFSAXXXXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQG 189
G+ ++GNKAD+ K + V+ + EK G
Sbjct: 134 GS------------PDIVMALVGNKADLQEKREVA------VEDGMDYAEKNG 168
>Medtr8g107070.1 | RAB GTPase-like protein A2D | HC |
chr8:45233889-45231298 | 20130731
Length = 265
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 25/141 (17%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+ +++GDSGVGK++L+ K + TIG ++ ++
Sbjct: 16 KAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNI-------------KVRDKL 62
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ER++ S +Y G + V+D+++R + S+ +W E+ G
Sbjct: 63 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFG------ 116
Query: 144 XXXXXXXXXXXYIVIGNKADI 164
I++GNK D+
Sbjct: 117 ------GEEMVVILVGNKCDL 131
>Medtr6g079550.1 | RAB GTPase-like protein A1D | HC |
chr6:30013567-30009535 | 20130731
Length = 216
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 31/166 (18%)
Query: 24 RVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXERN 83
+ +++GDSGVGK++L+ K + TIG K+ ++
Sbjct: 14 KTVLIGDSGVGKSNLISRFTKDEFRLDSKPTIGVEFGYKNI-------------KVRDKL 60
Query: 84 FFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSAXX 143
++WD +G ER++ S +Y G + V+D+++ T +++KW E+ G
Sbjct: 61 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDITRIITFVNIKKWLHELREFGN----- 115
Query: 144 XXXXXXXXXXXYIVIGNKADIAAKEGIRGSSGNLVDVARQWVEKQG 189
I++ NK+D++ + G + + EK+G
Sbjct: 116 -------EDMVIILVANKSDLSQSREVEKEEG------KGFAEKEG 148
>Medtr1g094220.3 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 236
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 22 QVRVLVVGDSGVGKTSLVHLIVKGSPVTRPQQTIGCTVDVKHTTYGNXXXXXXXXXXXXE 81
+V+++++GDSGVGK+ +V V+G + T+G + + +
Sbjct: 31 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVK-------- 82
Query: 82 RNFFVELWDVSGHERYQDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEISATGTFSA 141
E+WD +G ERY L+Y + +D++ + + Q W E+ G+
Sbjct: 83 ----FEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPESFSKAQYWVKELQKHGS--- 135
Query: 142 XXXXXXXXXXXXXYIVIGNKADIAAK 167
++GNKAD+ K
Sbjct: 136 ---------PDIVMALVGNKADLQEK 152