Miyakogusa Predicted Gene

Lj4g3v2785690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2785690.1 Non Characterized Hit- tr|I1NH49|I1NH49_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,37.09,9e-18,
,CUFF.51628.1
         (213 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g092210.1 | holocarboxylase synthetase | HC | chr8:3853633...   374   e-104
Medtr6g043220.1 | holocarboxylase synthetase | HC | chr6:1493170...   206   9e-54
Medtr1g098250.1 | holocarboxylase synthetase | HC | chr1:4421666...   192   2e-49
Medtr6g043220.2 | holocarboxylase synthetase | HC | chr6:1493176...   120   8e-28

>Medtr8g092210.1 | holocarboxylase synthetase | HC |
           chr8:38536335-38539856 | 20130731
          Length = 212

 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 178/213 (83%), Positives = 193/213 (90%), Gaps = 1/213 (0%)

Query: 1   MAKKRKSVATRLDEVDRTMYSTFCTTANSLSHLYTHAMNQQKLSFQAGERHALEKMYQWI 60
           MAKKRKSV +RLDEVDRTMYSTFCTTANSLSHLYTHAMNQQKLSFQAGERHALEKMYQWI
Sbjct: 1   MAKKRKSVESRLDEVDRTMYSTFCTTANSLSHLYTHAMNQQKLSFQAGERHALEKMYQWI 60

Query: 61  VRQQQEGSRVTTGDVVAHLQNELEYGAEEPPMSPRQPVYQNSQTTMPTNFGASIPSNAFG 120
           +RQQQEG RVTT D+V+HLQNELEYGAEE P+SPRQ + QNSQT + TNF ASIPSNAFG
Sbjct: 61  LRQQQEGMRVTTIDIVSHLQNELEYGAEESPVSPRQSIQQNSQTAIQTNFAASIPSNAFG 120

Query: 121 TTVVGQGMRAGQLDQQPKNSVFSNALSSPIRRSLQPYHMAQGSCPSSNLMSSGNGARNSE 180
           +TV GQG+R GQ D Q KNSVFSNALSSPIRRSLQPYH+AQGS PSSN+MSSGNG RN+E
Sbjct: 121 STVAGQGIRTGQTD-QVKNSVFSNALSSPIRRSLQPYHLAQGSNPSSNVMSSGNGTRNNE 179

Query: 181 ITYPNSQIRDTNSSNSSDCMDMHAESPGHDFTY 213
           + YP+ Q RDTNSSNSSDCMDMHA+SPGHDF Y
Sbjct: 180 MVYPSGQNRDTNSSNSSDCMDMHADSPGHDFPY 212


>Medtr6g043220.1 | holocarboxylase synthetase | HC |
           chr6:14931703-14937619 | 20130731
          Length = 195

 Score =  206 bits (525), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 112/209 (53%), Positives = 140/209 (66%), Gaps = 18/209 (8%)

Query: 1   MAKKRKSVATRLDEVDRTMYSTFCTTANSLSHLYTHAMNQQKLSFQAGERHALEKMYQWI 60
           MAKKRKS A+ LDEVDRTMY++F T ANSLS LY+HAMN QKLSF AGER+ALEK+YQWI
Sbjct: 1   MAKKRKSAASSLDEVDRTMYASFSTAANSLSQLYSHAMNHQKLSFHAGERNALEKLYQWI 60

Query: 61  VRQQQEGSRVTTGDVVAHLQNELEYGAEEPPMSPRQPVY-QNSQTTMP-TNFGASIPSNA 118
            +Q++ GSRV T DVV ++QNEL+Y  EEP MSPR P+  Q  Q  MP T+ G  + S +
Sbjct: 61  WKQEEGGSRVATVDVVNYIQNELDYCGEEPSMSPRAPLQNQQPQPMMPVTSSGFPVTSGS 120

Query: 119 FGTTV--VGQGMRAGQLDQQPKNSVFSNALSSPIRRSLQPYHMAQGSCPSSNLMSSGNGA 176
            G T+   GQG+R+   + QPKNSVFSNALSSP+RR+LQ Y + +G              
Sbjct: 121 SGQTIAGAGQGLRSDYCENQPKNSVFSNALSSPVRRNLQLYQIGEGG------------- 167

Query: 177 RNSEITYPNSQIRDTNSSNSSDCMDMHAE 205
            N    +  S   +  SSN+   MDMHA+
Sbjct: 168 -NRSFLHNQSSESNAVSSNNDSAMDMHAD 195


>Medtr1g098250.1 | holocarboxylase synthetase | HC |
           chr1:44216661-44220429 | 20130731
          Length = 207

 Score =  192 bits (487), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/209 (49%), Positives = 143/209 (68%), Gaps = 6/209 (2%)

Query: 1   MAKKRKSVATRLDEVDRTMYSTFCTTANSLSHLYTHAMNQQKLSFQAGERHALEKMYQWI 60
           MAKKRKS+AT LDEVDRTMY++FC+ ANSLS L+  A+N QKLSFQAG+RH LEK+YQWI
Sbjct: 1   MAKKRKSIATTLDEVDRTMYASFCSAANSLSQLHMQALNHQKLSFQAGQRHGLEKLYQWI 60

Query: 61  VRQQQEGSRVTTGDVVAHLQNELEYGAEEPPMSPRQPVYQNSQTTMPTNFGAS---IPSN 117
            RQQ+ GSRV T D++ ++QNEL+Y  EE   SPR P+ Q+ Q     +  +S   + S 
Sbjct: 61  WRQQEGGSRVATVDILNYIQNELDYFGEEQSTSPRAPL-QHQQLQPAVHVASSGFPVTSG 119

Query: 118 AFGTTVVGQGMRAGQLDQQPKNSVFSNALSSPIRRSLQPYHMAQGSCPSSNLMSSGNGAR 177
           +   TV+GQG+R+   D Q K+  FSNA S+ + RSL+ Y + +G    S+  S G+ + 
Sbjct: 120 SSCQTVIGQGLRSENWDNQSKSFEFSNASSNSVHRSLEHYQIGEGGSYLSS-PSMGSESL 178

Query: 178 NSEITYPNSQIRDTNSSNSSD-CMDMHAE 205
           NSE ++ + Q RD+   NS+D  MDMH++
Sbjct: 179 NSESSFLHQQRRDSTGFNSNDSTMDMHSD 207


>Medtr6g043220.2 | holocarboxylase synthetase | HC |
           chr6:14931764-14937283 | 20130731
          Length = 190

 Score =  120 bits (302), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 71/156 (45%), Positives = 94/156 (60%), Gaps = 18/156 (11%)

Query: 54  EKMYQWIVRQQQEGSRVTTGDVVAHLQNELEYGAEEPPMSPRQPVY-QNSQTTMP-TNFG 111
           EK+YQWI +Q++ GSRV T DVV ++QNEL+Y  EEP MSPR P+  Q  Q  MP T+ G
Sbjct: 49  EKLYQWIWKQEEGGSRVATVDVVNYIQNELDYCGEEPSMSPRAPLQNQQPQPMMPVTSSG 108

Query: 112 ASIPSNAFGTTV--VGQGMRAGQLDQQPKNSVFSNALSSPIRRSLQPYHMAQGSCPSSNL 169
             + S + G T+   GQG+R+   + QPKNSVFSNALSSP+RR+LQ Y + +G       
Sbjct: 109 FPVTSGSSGQTIAGAGQGLRSDYCENQPKNSVFSNALSSPVRRNLQLYQIGEGG------ 162

Query: 170 MSSGNGARNSEITYPNSQIRDTNSSNSSDCMDMHAE 205
                   N    +  S   +  SSN+   MDMHA+
Sbjct: 163 --------NRSFLHNQSSESNAVSSNNDSAMDMHAD 190