Miyakogusa Predicted Gene

Lj4g3v2765470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2765470.1 Non Characterized Hit- tr|G7LC97|G7LC97_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,40.47,0.00000000000006,seg,NULL,CUFF.51607.1
         (407 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g092675.1 | hypothetical protein | HC | chr8:38774669-3877...    82   1e-15

>Medtr8g092675.1 | hypothetical protein | HC |
          chr8:38774669-38774388 | 20130731
          Length = 93

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/78 (69%), Positives = 57/78 (73%), Gaps = 9/78 (11%)

Query: 1  MGGCATKPKVTKNDADAKVKAPEPEPEHEELKVDTTSVETKP------QQEQGDLNLNVN 54
          MGGCATKPKVTK D    VKAPEPEPE E++K D  SVETK       Q  Q  LNL+VN
Sbjct: 1  MGGCATKPKVTK-DGGVDVKAPEPEPEPEQVKED--SVETKVEAEKQEQLLQSSLNLDVN 57

Query: 55 EIVDDDQGNKRRSLSLLF 72
          EIVDDDQ NKRRSLSLLF
Sbjct: 58 EIVDDDQANKRRSLSLLF 75