Miyakogusa Predicted Gene

Lj4g3v2754450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2754450.1 tr|F4XZ00|F4XZ00_9CYAN PAP fibrillin OS=Moorea
producens 3L GN=LYNGBM3L_52540 PE=4 SV=1,33.67,8e-19,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; PAP_fibrillin,Plastid
lipid-associated pr,CUFF.51600.1
         (258 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g092680.1 | plastid lipid-associated protein | HC | chr8:3...   381   e-106
Medtr2g025050.1 | plastid lipid-associated protein | HC | chr2:8...    59   3e-09
Medtr5g029590.1 | plastid fibrillin | HC | chr5:12424334-1242874...    57   2e-08
Medtr1g075660.1 | plastid fibrillin | HC | chr1:33526397-3352887...    51   9e-07

>Medtr8g092680.1 | plastid lipid-associated protein | HC |
           chr8:38786802-38784455 | 20130731
          Length = 265

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/253 (75%), Positives = 209/253 (82%), Gaps = 3/253 (1%)

Query: 7   SPLISRTMNIMKLQNFVPAGNCSRINTTSRFGERASWFRPITIMKVAEQSSG--LVEDET 64
           SPL+ RTMNIMKLQ F P  N S I T SRFGE+  WFRPITI+KVAEQSSG  LVEDE 
Sbjct: 13  SPLVCRTMNIMKLQRFGPVSNRSWIKT-SRFGEKPLWFRPITIIKVAEQSSGYGLVEDEA 71

Query: 65  LAQKKRELYMAVEGINRGIFGMPSAQKIEIENLVKQLESQNPTPDPTLELEKVAGCWRLI 124
           L QKKRELY A+EGINRGIFG+PS +K+EIE LVKQLESQNPTP+PTLELEKV GCWRL+
Sbjct: 72  LGQKKRELYQALEGINRGIFGIPSGKKLEIETLVKQLESQNPTPEPTLELEKVDGCWRLV 131

Query: 125 YSTISILGSKRTKLGLRDFISLGDFFQTIDEVQSKAVNVIKFXXXXXXXXXXXXXXXXXF 184
           YSTISILGS+RTKLGLRDFI+LGDFFQ ID+ +SKAVNVIKF                 F
Sbjct: 132 YSTISILGSRRTKLGLRDFIALGDFFQIIDKTKSKAVNVIKFNAKGLILLCGELSIEASF 191

Query: 185 KIASTTRVDINYEKSTIIPDQLMNLFRKNYDLLLSIFNPEGWLEITYVDDSMRIGRDDKG 244
           KIAS TRVDIN+E STI PDQLMN+FRKNYD+LL IFNPEGWLEITYVDD MRIGRDDKG
Sbjct: 192 KIASRTRVDINFENSTITPDQLMNVFRKNYDILLGIFNPEGWLEITYVDDKMRIGRDDKG 251

Query: 245 NIFVLERSEDDNN 257
           NIFVLER ED++N
Sbjct: 252 NIFVLERFEDNSN 264


>Medtr2g025050.1 | plastid lipid-associated protein | HC |
           chr2:8885310-8882730 | 20130731
          Length = 317

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 44/244 (18%)

Query: 45  RPITIMKVAE-QSSGLVEDETLAQKKRELYMAVEGINRGIFGMPSAQKIEIENLVKQLES 103
            P   + VAE Q++  V D    + K+ L  +  G +RG+    S  + EI  L+ QLE+
Sbjct: 69  EPSAGVAVAEVQATEKVSDGETEKLKKALVGSFYGTDRGLKAT-SETRAEIVELITQLEA 127

Query: 104 QNPTPDPTLELEKVAGCWRLIYSTISILGSKRTKLGLRDFISLGDFFQTIDEVQSKAVNV 163
           +NPTP  T  L  + G W L Y++ + L    +   L   +++ +  QTID       N 
Sbjct: 128 KNPTPASTDALSLLNGKWILAYTSFAGLFPLLSSG-LLPLLTVEEISQTIDSESLTVQNS 186

Query: 164 IKFXXXXXXXXXXXXXXXXXFKIASTTRVDINYEKSTIIPDQLMNLFR--KNYDLL---- 217
           + F                 F++ S  R+ I +E+  I   QL +     +N ++L    
Sbjct: 187 VLF---AGPLTTTSISTNAKFEVRSPNRLQIKFEEGVIGTPQLTDSLEIPENVEVLGQKI 243

Query: 218 -LSIF-------------------------------NPEGWLEITYVDDSMRIGRDDKGN 245
            LS F                               N + WL  TY+D+ +RI R D G+
Sbjct: 244 DLSPFKGIFTSVQNTASSVVQTISNQPPLKIPISNDNAQSWLLTTYLDEELRISRGDGGS 303

Query: 246 IFVL 249
           +FVL
Sbjct: 304 VFVL 307


>Medtr5g029590.1 | plastid fibrillin | HC | chr5:12424334-12428740 |
           20130731
          Length = 355

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 86/221 (38%), Gaps = 44/221 (19%)

Query: 69  KRELYMAVEGINRGIFGMPSAQKIEIENLVKQLESQNPTPDPTLELEKVAGCWRLIYSTI 128
           KR L   V G   G F   S  + E+   V QLE+ NPTP P  E E + G W L+Y T 
Sbjct: 134 KRALVDTVYGTELG-FRAGSEVRAEVSEFVAQLEAANPTPAPVEEPELLNGNWVLLY-TA 191

Query: 129 SILGSKRTKLGLRDFISLGDFFQTIDEVQSKAVNVIKFXXXXXXXXXXXXXXXXXFKIAS 188
           S         G    + +    QTID   S  VN +                    ++ S
Sbjct: 192 SSELLPLLAAGALPLVKVDKILQTIDTYSSTVVNSVTLSSPFASSSFSASASF---EVRS 248

Query: 189 TTRVDINYEKSTIIPDQL---------MNLFRKNYDL-------------------LLSI 220
            TR+ + +++ ++ P ++         +N+F +N  L                   ++S 
Sbjct: 249 PTRIQVTFKEGSLQPPEIKSKIDLPENINIFGQNLSLGPLQQSLGPLENVVANISRVISG 308

Query: 221 FNP----------EGWLEITYVDDSMRIGRDDKGNIFVLER 251
            +P            WL  TY+D  +RI R D G +FVL R
Sbjct: 309 QSPLKIPIPGERTSSWLLTTYLDKDLRISRGD-GGLFVLAR 348


>Medtr1g075660.1 | plastid fibrillin | HC | chr1:33526397-33528879 |
           20130731
          Length = 276

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 37/206 (17%)

Query: 69  KRELYMAVEGINRGIFGMPSAQKIE-IENLVKQLESQNPTPDPTLELEKVAGCWRLIYST 127
           K  L  AV G+NRG+    S + ++  +   K+LE      D T  L+++ G W+LIYS+
Sbjct: 80  KFNLLSAVSGLNRGLAA--SEEDLQKADAAAKELEDAGGLVDLTDNLDRLQGRWKLIYSS 137

Query: 128 I---SILGSKR--TKLGLRDFISLGDFFQTIDEVQSKAVNVIKFXXXXX---XXXXXXXX 179
                 LG  R    +G    I+LG  FQ ID +     N++                  
Sbjct: 138 AFSSRTLGGSRPGPPIGRLLPITLGQVFQRIDILSKDFDNIVDLQLGAPWPLPPLEVTAT 197

Query: 180 XXXXFKIASTTRVDINYEKSTI----------------IPDQLMNLFRKNYDLLLSIFNP 223
               F++  ++++ I +EK+T+                IPD L     +           
Sbjct: 198 LAHKFELVGSSKIKIIFEKTTVKTTGTFSQLPPLDLPQIPDALRPQSNRG---------- 247

Query: 224 EGWLEITYVDDSMRIGRDDKGNIFVL 249
            G  E+TY+D   R+ R D+G + V 
Sbjct: 248 SGDFEVTYLDADTRVTRGDRGELRVF 273