Miyakogusa Predicted Gene
- Lj4g3v2742760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2742760.1 Non Characterized Hit- tr|I3SY87|I3SY87_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; HISTONE DEACETYLASE,Histone deacetylase superfamily;
seg,NULL; no descript,NODE_26479_length_899_cov_104.684090.path2.1
(215 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g093800.1 | histone deacetylase superfamily protein | HC |... 399 e-112
Medtr4g109500.1 | histone deacetylase superfamily protein | HC |... 123 1e-28
Medtr4g109500.2 | histone deacetylase superfamily protein | HC |... 123 1e-28
Medtr4g111985.1 | histone deacetylase superfamily protein | HC |... 113 1e-25
Medtr4g111985.2 | histone deacetylase superfamily protein | HC |... 113 1e-25
Medtr4g111985.5 | histone deacetylase superfamily protein | HC |... 113 1e-25
Medtr2g087270.1 | histone deacetylase superfamily protein | HC |... 99 2e-21
Medtr4g111985.3 | histone deacetylase superfamily protein | HC |... 96 3e-20
Medtr4g111985.4 | histone deacetylase superfamily protein | HC |... 96 3e-20
Medtr3g077160.1 | histone deacetylase family protein | HC | chr3... 69 3e-12
Medtr5g004640.2 | histone deacetylase family protein | HC | chr5... 69 4e-12
Medtr5g004640.1 | histone deacetylase family protein | HC | chr5... 69 4e-12
Medtr3g118535.1 | histone deacetylase family protein | HC | chr3... 67 9e-12
Medtr1g016440.1 | histone deacetylase superfamily protein | HC |... 62 4e-10
Medtr4g055080.2 | histone deacetylase family protein | HC | chr4... 60 2e-09
Medtr4g055080.1 | histone deacetylase family protein | HC | chr4... 60 2e-09
Medtr1g016440.3 | histone deacetylase superfamily protein | HC |... 48 6e-06
Medtr1g016440.2 | histone deacetylase superfamily protein | HC |... 48 6e-06
>Medtr8g093800.1 | histone deacetylase superfamily protein | HC |
chr8:39251957-39246652 | 20130731
Length = 420
Score = 399 bits (1026), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/215 (88%), Positives = 199/215 (92%)
Query: 1 MGFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSYP 60
MGFC+FGNVAIAAR+AQRVH LKRVFIIDFDVHHGNGTNDAFYDDPD+FFLSFHQDGSYP
Sbjct: 206 MGFCIFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLSFHQDGSYP 265
Query: 61 GTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGH 120
GTGKF LNLPLPGGSGDTAIR+VFDEVVVPCAQRFKPDIILVSAGYDGH
Sbjct: 266 GTGKFDEVGAGDGEGTTLNLPLPGGSGDTAIRSVFDEVVVPCAQRFKPDIILVSAGYDGH 325
Query: 121 VLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFRALIG 180
VLDPLANLQ TTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVAD+FRAL+G
Sbjct: 326 VLDPLANLQLTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLG 385
Query: 181 DQSLASEFDNPNILYEEPTAKIKQAIQRIKHIHSL 215
D+SLASEFDNPNILYEEPT KIKQAIQRIK +HSL
Sbjct: 386 DKSLASEFDNPNILYEEPTKKIKQAIQRIKCVHSL 420
>Medtr4g109500.1 | histone deacetylase superfamily protein | HC |
chr4:45499722-45507261 | 20130731
Length = 655
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 103/199 (51%), Gaps = 25/199 (12%)
Query: 1 MGFCVFGNVAIAARYAQRVH---ALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQ-- 55
MGFC+F NVA+AA Y +K++ I+D+DVHHGNGT F++D + F S H+
Sbjct: 156 MGFCLFNNVAVAASYLLNDSPELGVKKILIVDWDVHHGNGTQKVFWNDSRVLFFSVHRHE 215
Query: 56 ---------DGSYPGTGKFXXXXXXXXXXXXLNLPLPGGS-GDTAIRTVFDEVVVPCAQR 105
DG Y TG+ +N+P G GDT +D +++P A+
Sbjct: 216 FGRFYPCGDDGFYNMTGE------GDGAGYNINVPWENGRCGDTDYFAAWDHILLPVAKE 269
Query: 106 FKPDIILVSAGYDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLK 165
F PDII+VSAG+D V DPL T Y +L + A+ GR V LEGGYNL
Sbjct: 270 FNPDIIIVSAGFDAAVGDPLGGCCITPFGYSLLLKKLMNFAE----GRIVLVLEGGYNLD 325
Query: 166 SLSYSVADSFRALIGDQSL 184
S++ S+ L+ D+ L
Sbjct: 326 SIAKSMHACVEVLLEDKPL 344
>Medtr4g109500.2 | histone deacetylase superfamily protein | HC |
chr4:45499722-45507261 | 20130731
Length = 650
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 103/199 (51%), Gaps = 25/199 (12%)
Query: 1 MGFCVFGNVAIAARYAQRVH---ALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQ-- 55
MGFC+F NVA+AA Y +K++ I+D+DVHHGNGT F++D + F S H+
Sbjct: 156 MGFCLFNNVAVAASYLLNDSPELGVKKILIVDWDVHHGNGTQKVFWNDSRVLFFSVHRHE 215
Query: 56 ---------DGSYPGTGKFXXXXXXXXXXXXLNLPLPGG-SGDTAIRTVFDEVVVPCAQR 105
DG Y TG+ +N+P G GDT +D +++P A+
Sbjct: 216 FGRFYPCGDDGFYNMTGE------GDGAGYNINVPWENGRCGDTDYFAAWDHILLPVAKE 269
Query: 106 FKPDIILVSAGYDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLK 165
F PDII+VSAG+D V DPL T Y +L + A+ GR V LEGGYNL
Sbjct: 270 FNPDIIIVSAGFDAAVGDPLGGCCITPFGYSLLLKKLMNFAE----GRIVLVLEGGYNLD 325
Query: 166 SLSYSVADSFRALIGDQSL 184
S++ S+ L+ D+ L
Sbjct: 326 SIAKSMHACVEVLLEDKPL 344
>Medtr4g111985.1 | histone deacetylase superfamily protein | HC |
chr4:46339481-46328880 | 20130731
Length = 640
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Query: 1 MGFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSF--HQDGS 58
MGFC+ N A+AA AQ ++V I+D+DVHHGNGT + F + + ++S H+DG+
Sbjct: 370 MGFCLHNNAAVAALAAQAA-GARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGT 428
Query: 59 -YPGTGKFXXXXXXXXXXXXLNLPLP-GGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAG 116
YPGTG +N+P GG GD F VV+P A F PD ++SAG
Sbjct: 429 FYPGTGGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAG 488
Query: 117 YDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFR 176
+D DPL T Y + + L+ GG+ + LEGGYNL+S+S S +
Sbjct: 489 FDAARGDPLGGCDITPSGYAQMTHMLNALS----GGKMLVILEGGYNLRSISSSATSVIK 544
Query: 177 ALIGDQSLASEFDN 190
L+G+ S E +N
Sbjct: 545 VLLGE-SPVCELEN 557
>Medtr4g111985.2 | histone deacetylase superfamily protein | HC |
chr4:46338588-46328537 | 20130731
Length = 599
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Query: 1 MGFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSF--HQDGS 58
MGFC+ N A+AA AQ ++V I+D+DVHHGNGT + F + + ++S H+DG+
Sbjct: 331 MGFCLHNNAAVAALAAQAA-GARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGT 389
Query: 59 -YPGTGKFXXXXXXXXXXXXLNLPLP-GGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAG 116
YPGTG +N+P GG GD F VV+P A F PD ++SAG
Sbjct: 390 FYPGTGGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAG 449
Query: 117 YDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFR 176
+D DPL T Y + + L+ GG+ + LEGGYNL+S+S S +
Sbjct: 450 FDAARGDPLGGCDITPSGYAQMTHMLNALS----GGKMLVILEGGYNLRSISSSATSVIK 505
Query: 177 ALIGDQSLASEFDN 190
L+G+ S E +N
Sbjct: 506 VLLGE-SPVCELEN 518
>Medtr4g111985.5 | histone deacetylase superfamily protein | HC |
chr4:46338860-46328537 | 20130731
Length = 599
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Query: 1 MGFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSF--HQDGS 58
MGFC+ N A+AA AQ ++V I+D+DVHHGNGT + F + + ++S H+DG+
Sbjct: 331 MGFCLHNNAAVAALAAQAA-GARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGT 389
Query: 59 -YPGTGKFXXXXXXXXXXXXLNLPLP-GGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAG 116
YPGTG +N+P GG GD F VV+P A F PD ++SAG
Sbjct: 390 FYPGTGGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAG 449
Query: 117 YDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFR 176
+D DPL T Y + + L+ GG+ + LEGGYNL+S+S S +
Sbjct: 450 FDAARGDPLGGCDITPSGYAQMTHMLNALS----GGKMLVILEGGYNLRSISSSATSVIK 505
Query: 177 ALIGDQSLASEFDN 190
L+G+ S E +N
Sbjct: 506 VLLGE-SPVCELEN 518
>Medtr2g087270.1 | histone deacetylase superfamily protein | HC |
chr2:36680260-36677137 | 20130731
Length = 386
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 2 GFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQD----- 56
G+C N +A + A K+V +ID DVH+GNGT + FY + +S H +
Sbjct: 163 GYCFLNNAGLAVQLALDS-GCKKVAVIDIDVHYGNGTAEGFYSSNKVLTVSLHMNHGSWG 221
Query: 57 GSYPGTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAG 116
S+P +G LN+PLP G+GD F+E+VVP +F+PD+I++ G
Sbjct: 222 PSHPQSGSIDELGDGEGYGYNLNIPLPNGTGDNGYVYAFNELVVPSIHKFEPDMIVLVVG 281
Query: 117 YDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFR 176
D DP T Y + + LA GR + EGGY++ +Y + +
Sbjct: 282 QDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRHSDGRLLIVQEGGYHVTYSAYCLHATLE 341
Query: 177 ALI 179
++
Sbjct: 342 GVL 344
>Medtr4g111985.3 | histone deacetylase superfamily protein | HC |
chr4:46338755-46328564 | 20130731
Length = 512
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 1 MGFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSF--HQDGS 58
MGFC+ N A+AA AQ ++V I+D+DVHHGNGT + F + + ++S H+DG+
Sbjct: 331 MGFCLHNNAAVAALAAQAA-GARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGT 389
Query: 59 -YPGTGKFXXXXXXXXXXXXLNLPLP-GGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAG 116
YPGTG +N+P GG GD F VV+P A F PD ++SAG
Sbjct: 390 FYPGTGGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAG 449
Query: 117 YDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGY 162
+D DPL T Y + + L+ GG+ + LEGG+
Sbjct: 450 FDAARGDPLGGCDITPSGYAQMTHMLNALS----GGKMLVILEGGF 491
>Medtr4g111985.4 | histone deacetylase superfamily protein | HC |
chr4:46338588-46328564 | 20130731
Length = 512
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 1 MGFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSF--HQDGS 58
MGFC+ N A+AA AQ ++V I+D+DVHHGNGT + F + + ++S H+DG+
Sbjct: 331 MGFCLHNNAAVAALAAQAA-GARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGT 389
Query: 59 -YPGTGKFXXXXXXXXXXXXLNLPLP-GGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAG 116
YPGTG +N+P GG GD F VV+P A F PD ++SAG
Sbjct: 390 FYPGTGGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAG 449
Query: 117 YDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGY 162
+D DPL T Y + + L+ GG+ + LEGG+
Sbjct: 450 FDAARGDPLGGCDITPSGYAQMTHMLNALS----GGKMLVILEGGF 491
>Medtr3g077160.1 | histone deacetylase family protein | HC |
chr3:34636818-34643051 | 20130731
Length = 476
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 2 GFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGS-YP 60
GFC ++ + +VH +RV +D DVHHG+G +AFY + +SFH+ G +P
Sbjct: 170 GFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFP 227
Query: 61 GTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYD 118
GTG LN+PL G D R +F ++ ++PD +++ G D
Sbjct: 228 GTGHIKDTGVGPGKDYALNVPLNDGMDDENFRALFRPIMQKVMDVYQPDAVVLQCGAD 285
>Medtr5g004640.2 | histone deacetylase family protein | HC |
chr5:52671-45920 | 20130731
Length = 495
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 2 GFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSY-P 60
GFC ++ +A ++H +RV +D D+HHG+G +AFY + +SFH+ G Y P
Sbjct: 161 GFCYVNDIVLAILELLKIH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFP 218
Query: 61 GTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYD 118
GTG LN+PL G D + ++F ++ + F+P +++ G D
Sbjct: 219 GTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHSLFKPLMGKVMEVFRPGAVVLQCGAD 276
>Medtr5g004640.1 | histone deacetylase family protein | HC |
chr5:52671-45920 | 20130731
Length = 495
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 2 GFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSY-P 60
GFC ++ +A ++H +RV +D D+HHG+G +AFY + +SFH+ G Y P
Sbjct: 161 GFCYVNDIVLAILELLKIH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFP 218
Query: 61 GTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYD 118
GTG LN+PL G D + ++F ++ + F+P +++ G D
Sbjct: 219 GTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHSLFKPLMGKVMEVFRPGAVVLQCGAD 276
>Medtr3g118535.1 | histone deacetylase family protein | HC |
chr3:55483175-55497394 | 20130731
Length = 498
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 2 GFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSY-P 60
GFC ++ +A + H +RV +D D+HHG+G +AFY + +SFH+ G Y P
Sbjct: 158 GFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFP 215
Query: 61 GTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYD 118
GTG LN+PL G D + +F ++ + F+P +++ G D
Sbjct: 216 GTGDLRDIGYGKGKYYSLNVPLDDGIDDESYHLLFKPLICKVMEIFRPGAVVLQCGAD 273
>Medtr1g016440.1 | histone deacetylase superfamily protein | HC |
chr1:4371842-4377658 | 20130731
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 9/177 (5%)
Query: 2 GFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSYPG 61
GFC + ++++ +A + RV IID D H GNG F DD ++ L + G YP
Sbjct: 168 GFCAYADISLCIHFAFVQLNISRVIIIDLDAHQGNGHEMDFADDNRVYILDMYNPGIYP- 226
Query: 62 TGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGHV 121
+ + G+ DE + +RF P++++ +AG D
Sbjct: 227 ------LDHEARSYINQKVEVKSGTRTEEYLLKLDEALEVAGRRFNPELLVYNAGTDILE 280
Query: 122 LDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFRAL 178
DPL L+ + + + + A+ V GGY +KS + +ADS L
Sbjct: 281 GDPLGRLKISPDGIALRDEKVFRFARKK-NIPIVMLTSGGY-MKSSARVIADSILNL 335
>Medtr4g055080.2 | histone deacetylase family protein | HC |
chr4:20028709-20022768 | 20130731
Length = 405
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 2 GFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGS--Y 59
GFC ++ + + H RV ID DVHHG+G +AFY + +S H+ G +
Sbjct: 120 GFCYINDLVLGILELLKHHP--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSSHKYGDLFF 177
Query: 60 PGTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDG 119
PGTG +N+PL G D++ +F ++ + ++P I++ G D
Sbjct: 178 PGTGDAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKTIISKVVETYQPGAIVLQCGADS 237
Query: 120 HVLDPLA 126
D L
Sbjct: 238 LAGDRLG 244
>Medtr4g055080.1 | histone deacetylase family protein | HC |
chr4:20032485-20022768 | 20130731
Length = 430
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 2 GFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGS--Y 59
GFC ++ + + H RV ID DVHHG+G +AFY + +S H+ G +
Sbjct: 145 GFCYINDLVLGILELLKHHP--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSSHKYGDLFF 202
Query: 60 PGTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDG 119
PGTG +N+PL G D++ +F ++ + ++P I++ G D
Sbjct: 203 PGTGDAKEIGEREGKFYAINVPLKDGIDDSSFTRLFKTIISKVVETYQPGAIVLQCGADS 262
Query: 120 HVLDPLANLQFTTGTYYMLASSIKQL 145
D L + + +K+
Sbjct: 263 LAGDRLGCFNLSIDGHAECVRFVKKF 288
>Medtr1g016440.3 | histone deacetylase superfamily protein | HC |
chr1:4371844-4377658 | 20130731
Length = 273
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 2 GFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSYP 60
GFC + ++++ +A + RV IID D H GNG F DD ++ L + G YP
Sbjct: 168 GFCAYADISLCIHFAFVQLNISRVIIIDLDAHQGNGHEMDFADDNRVYILDMYNPGIYP 226
>Medtr1g016440.2 | histone deacetylase superfamily protein | HC |
chr1:4371844-4377658 | 20130731
Length = 273
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 2 GFCVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSYP 60
GFC + ++++ +A + RV IID D H GNG F DD ++ L + G YP
Sbjct: 168 GFCAYADISLCIHFAFVQLNISRVIIIDLDAHQGNGHEMDFADDNRVYILDMYNPGIYP 226