Miyakogusa Predicted Gene
- Lj4g3v2730400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2730400.1 Non Characterized Hit- tr|I3T4D1|I3T4D1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,65.08,2e-17,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.51613.1
(68 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g089815.1 | lysine ketoglutarate reductase trans-splicing ... 63 6e-11
Medtr8g089815.2 | lysine ketoglutarate reductase trans-splicing ... 63 6e-11
Medtr3g086610.6 | lysine ketoglutarate reductase trans-splicing ... 55 2e-08
Medtr3g086610.4 | lysine ketoglutarate reductase trans-splicing ... 54 2e-08
Medtr3g086610.2 | lysine ketoglutarate reductase trans-splicing ... 54 2e-08
Medtr3g086610.5 | lysine ketoglutarate reductase trans-splicing ... 54 2e-08
Medtr3g086610.3 | lysine ketoglutarate reductase trans-splicing ... 54 2e-08
Medtr3g086610.1 | lysine ketoglutarate reductase trans-splicing ... 54 2e-08
Medtr8g089820.1 | lysine ketoglutarate reductase trans-splicing ... 48 2e-06
>Medtr8g089815.1 | lysine ketoglutarate reductase trans-splicing
protein | HC | chr8:37451119-37458005 | 20130731
Length = 397
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 42/67 (62%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALTTKLNLPSSLAPSVDVSYIE 60
MG TRSSTNRKP++SMRL S+P LTTKL + S L PS+DVS IE
Sbjct: 1 MGTNTRSSTNRKPNESMRLVLTTFVGIVFGFLIGISYPTLTTKLTISSRLLPSIDVSSIE 60
Query: 61 DKDDSGH 67
D+ +SG+
Sbjct: 61 DEYESGN 67
>Medtr8g089815.2 | lysine ketoglutarate reductase trans-splicing
protein | HC | chr8:37451122-37458005 | 20130731
Length = 397
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 42/67 (62%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALTTKLNLPSSLAPSVDVSYIE 60
MG TRSSTNRKP++SMRL S+P LTTKL + S L PS+DVS IE
Sbjct: 1 MGTNTRSSTNRKPNESMRLVLTTFVGIVFGFLIGISYPTLTTKLTISSRLLPSIDVSSIE 60
Query: 61 DKDDSGH 67
D+ +SG+
Sbjct: 61 DEYESGN 67
>Medtr3g086610.6 | lysine ketoglutarate reductase trans-splicing
protein | HC | chr3:39259919-39264384 | 20130731
Length = 368
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
MG TRS RKPS+ MRL SFP L+ TK NLPS L PS+D+SYI
Sbjct: 1 MGTVTRSPNGRKPSEIMRLIVTTFIGVVFGFFLGVSFPTLSLTKFNLPSGLLPSIDLSYI 60
Query: 60 EDK 62
E++
Sbjct: 61 EER 63
>Medtr3g086610.4 | lysine ketoglutarate reductase trans-splicing
protein | HC | chr3:39259919-39264384 | 20130731
Length = 399
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
MG TRS RKPS+ MRL SFP L+ TK NLPS L PS+D+SYI
Sbjct: 1 MGTVTRSPNGRKPSEIMRLIVTTFIGVVFGFFLGVSFPTLSLTKFNLPSGLLPSIDLSYI 60
Query: 60 EDK 62
E++
Sbjct: 61 EER 63
>Medtr3g086610.2 | lysine ketoglutarate reductase trans-splicing
protein | HC | chr3:39259919-39264384 | 20130731
Length = 399
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
MG TRS RKPS+ MRL SFP L+ TK NLPS L PS+D+SYI
Sbjct: 1 MGTVTRSPNGRKPSEIMRLIVTTFIGVVFGFFLGVSFPTLSLTKFNLPSGLLPSIDLSYI 60
Query: 60 EDK 62
E++
Sbjct: 61 EER 63
>Medtr3g086610.5 | lysine ketoglutarate reductase trans-splicing
protein | HC | chr3:39259919-39264384 | 20130731
Length = 399
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
MG TRS RKPS+ MRL SFP L+ TK NLPS L PS+D+SYI
Sbjct: 1 MGTVTRSPNGRKPSEIMRLIVTTFIGVVFGFFLGVSFPTLSLTKFNLPSGLLPSIDLSYI 60
Query: 60 EDK 62
E++
Sbjct: 61 EER 63
>Medtr3g086610.3 | lysine ketoglutarate reductase trans-splicing
protein | HC | chr3:39259934-39264375 | 20130731
Length = 399
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
MG TRS RKPS+ MRL SFP L+ TK NLPS L PS+D+SYI
Sbjct: 1 MGTVTRSPNGRKPSEIMRLIVTTFIGVVFGFFLGVSFPTLSLTKFNLPSGLLPSIDLSYI 60
Query: 60 EDK 62
E++
Sbjct: 61 EER 63
>Medtr3g086610.1 | lysine ketoglutarate reductase trans-splicing
protein | HC | chr3:39259919-39264384 | 20130731
Length = 399
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 1 MGIGTRSSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPALT-TKLNLPSSLAPSVDVSYI 59
MG TRS RKPS+ MRL SFP L+ TK NLPS L PS+D+SYI
Sbjct: 1 MGTVTRSPNGRKPSEIMRLIVTTFIGVVFGFFLGVSFPTLSLTKFNLPSGLLPSIDLSYI 60
Query: 60 EDK 62
E++
Sbjct: 61 EER 63
>Medtr8g089820.1 | lysine ketoglutarate reductase trans-splicing
protein | HC | chr8:37459888-37463662 | 20130731
Length = 390
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 7 SSTNRKPSDSMRLXXXXXXXXXXXXXXXXSFPAL-TTKLNLPSSLAPSVDVSYIEDKD 63
S + RKP++SMRL S PA TTKLNLPSSL PS+D+S I +D
Sbjct: 2 SYSKRKPNESMRLIVIFFFGGFLGLFIGLSVPAFSTTKLNLPSSLLPSIDLSCIRGRD 59