Miyakogusa Predicted Gene
- Lj4g3v2717080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2717080.1 Non Characterized Hit- tr|I1IA16|I1IA16_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.97,3e-18,RNA-binding domain, RBD,NULL; seg,NULL; RNA
recognition motif,RNA recognition motif domain; SUBFAMIL,CUFF.51545.1
(588 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g086380.1 | RNA recognition motif 1 in terminal EAR1-like ... 290 4e-78
Medtr8g100160.1 | RNA recognition motif 1 in plant MEI2-like pro... 139 9e-33
Medtr8g100160.2 | RNA recognition motif 1 in plant MEI2-like pro... 139 1e-32
Medtr3g098620.4 | RNA recognition motif 1 in plant MEI2-like pro... 137 3e-32
Medtr3g098620.1 | RNA recognition motif 1 in plant MEI2-like pro... 137 3e-32
Medtr3g448370.1 | RNA recognition motif 2 in plant MEI2-like pro... 137 3e-32
Medtr3g448370.2 | RNA recognition motif 2 in plant MEI2-like pro... 137 3e-32
Medtr3g448370.4 | RNA recognition motif 2 in plant MEI2-like pro... 137 4e-32
Medtr3g448370.5 | RNA recognition motif 2 in plant MEI2-like pro... 137 4e-32
Medtr3g448370.3 | RNA recognition motif 2 in plant MEI2-like pro... 137 4e-32
Medtr3g098620.5 | RNA recognition motif 1 in plant MEI2-like pro... 134 2e-31
Medtr2g049640.2 | RNA recognition motif 2 in plant MEI2-like pro... 134 2e-31
Medtr2g049640.1 | RNA recognition motif 2 in plant MEI2-like pro... 134 2e-31
Medtr3g098620.3 | RNA recognition motif 1 in plant MEI2-like pro... 134 2e-31
Medtr3g098620.2 | RNA recognition motif 1 in plant MEI2-like pro... 134 2e-31
Medtr7g020950.1 | RNA recognition motif 1 in plant MEI2-like pro... 132 1e-30
Medtr7g020950.2 | RNA recognition motif 1 in plant MEI2-like pro... 132 1e-30
Medtr4g071310.1 | RNA recognition motif 3 in plant MEI2-like pro... 122 1e-27
Medtr7g118210.1 | RNA recognition motif 2 in plant MEI2-like pro... 110 4e-24
Medtr0166s0040.1 | RNA recognition motif 3 in plant MEI2-like pr... 108 1e-23
Medtr5g059640.1 | RNA recognition motif 3 in plant MEI2-like pro... 108 1e-23
Medtr5g059620.1 | RNA recognition motif 3 in plant MEI2-like pro... 105 1e-22
Medtr0166s0030.1 | RNA recognition motif 3 in plant MEI2-like pr... 104 3e-22
Medtr5g068540.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 84 3e-16
Medtr5g058270.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 82 2e-15
Medtr6g012500.1 | pollen allergen protein | LC | chr6:3804518-38... 59 1e-08
Medtr3g083550.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 54 4e-07
Medtr1g054675.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 52 2e-06
Medtr5g079870.3 | RNA recognition motif, a.k.a. RRM, RBD protein... 51 3e-06
Medtr5g079870.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 51 4e-06
>Medtr3g086380.1 | RNA recognition motif 1 in terminal EAR1-like
protein, putative | HC | chr3:39136472-39139376 |
20130731
Length = 524
Score = 290 bits (741), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/231 (62%), Positives = 173/231 (74%), Gaps = 16/231 (6%)
Query: 351 FVKTHSRDSSVESMNQLQGRSNRPCRGRQARHDETRFLIQEDAASQSGCIDSRTTVMIKN 410
FV+ SR+S G S +G+ A+ E RFLI+EDA +S D RTT+MIKN
Sbjct: 294 FVRVQSRESF--------GESAWSWKGKLAKRHENRFLIKEDAIVES---DPRTTLMIKN 342
Query: 411 IPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVGYGFVNMTSPE 470
IPNKYSQKLL+NMLDNHC+H NEQ+GD + LSSYDF+YLPIDF NKCNVGYGFVNMTSPE
Sbjct: 343 IPNKYSQKLLLNMLDNHCVHCNEQLGDGEPLSSYDFVYLPIDFKNKCNVGYGFVNMTSPE 402
Query: 471 ATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIEHYLPVYFSPP 530
ATLR YKAF HQ WEVFNSRKIC++TYARVQGLE+LKEHFKNSKFP E+EHYLPV FSPP
Sbjct: 403 ATLRFYKAFQHQHWEVFNSRKICQLTYARVQGLESLKEHFKNSKFPCEMEHYLPVVFSPP 462
Query: 531 RDGKQVTEPLPIGQSNKH-----SRSFSIGSHSHMVGTSSEDLINHQNGSV 576
RDGKQ+TEP+P+ + S + + H VG+ D+I+ ++G +
Sbjct: 463 RDGKQLTEPIPVAGNMLQIGAAPSVADEMEGQDHRVGSGGCDVISRKSGGI 513
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 116/223 (52%), Gaps = 38/223 (17%)
Query: 61 PFCYGEPLPYPP-----PAHIXXXXXXXXXXXXXXXXXXXXXEAAAAVTESSVRRQLEIF 115
P G P PYPP P H+ A E+ +R+ L F
Sbjct: 21 PVAVGIPYPYPPYAVTPPPHLSTIPTRSILL-----------SPAPPTPETDLRKDLSAF 69
Query: 116 GDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQ--TKLLNPPA------------ 161
G+VR VQ + G + H+YDLRHAETA AAIR NP +
Sbjct: 70 GEVRAVQTDSFRNGVITAHYYDLRHAETAFAAIRTHHVLCAAYFNPLSYSQIFPTPLPPP 129
Query: 162 -RGVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRH 220
G+ G +WA + L + QNQGT+VVFN+D DV + L+Q+F FG IKE+R
Sbjct: 130 PPGLVAGAPLWAHYVLS------DAQNQGTLVVFNLDDDVSSDQLQQVFGAFGAIKEVRD 183
Query: 221 -PQTKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRP 262
P K++Q FVEFFDIRDA AL+ +NGKEI+G+P+ IEFS+P
Sbjct: 184 TPWKKRNQSFVEFFDIRDAEKALKELNGKEINGKPIAIEFSKP 226
>Medtr8g100160.1 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr8:40164328-40156696 | 20130731
Length = 964
Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 84/143 (58%), Gaps = 12/143 (8%)
Query: 401 DSRTTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVG 460
DSRTT+MIKNIPNKY+ K+L+ +D C +YDFLYLPIDF NKCNVG
Sbjct: 795 DSRTTLMIKNIPNKYTSKMLLVAIDEQC------------RGTYDFLYLPIDFKNKCNVG 842
Query: 461 YGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIE 520
Y F+NM P + ++AFH + WE FNS K+ + YAR+QG +L HF+NS E +
Sbjct: 843 YAFINMIDPAQIIPFHQAFHGKKWEKFNSEKVASLAYARIQGRASLVSHFQNSSLMNEDK 902
Query: 521 HYLPVYFSPPRDGKQVTEPLPIG 543
P+ F EP P+G
Sbjct: 903 RCRPILFQTEGPNAGDMEPFPVG 925
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 101 AAVTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPP 160
++V + ++ E +GD+R + + G V++ ++DLR A+ A+ A+ Q+K L
Sbjct: 278 SSVEDFELKTLFEQYGDIRTMYTACKHRGFVMISYFDLRAAQRAMQAL----QSKPLRSR 333
Query: 161 ARGVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRH 220
+ Y ++P +A + GT+++ +D V + ++IF +G IK+I
Sbjct: 334 KLDIHY--------SIPKVNAPEKDIGHGTLMLSGLDSSVSNDEFKRIFGFYGEIKDIYE 385
Query: 221 PQTKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRP 262
K +F+EF+D+R A AL +N EI G+ + +E P
Sbjct: 386 YPEMKHLKFIEFYDVRAAEAALRALNRIEIAGKQIKLEPGHP 427
>Medtr8g100160.2 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr8:40164328-40156696 | 20130731
Length = 968
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 84/143 (58%), Gaps = 12/143 (8%)
Query: 401 DSRTTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVG 460
DSRTT+MIKNIPNKY+ K+L+ +D C +YDFLYLPIDF NKCNVG
Sbjct: 799 DSRTTLMIKNIPNKYTSKMLLVAIDEQC------------RGTYDFLYLPIDFKNKCNVG 846
Query: 461 YGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIE 520
Y F+NM P + ++AFH + WE FNS K+ + YAR+QG +L HF+NS E +
Sbjct: 847 YAFINMIDPAQIIPFHQAFHGKKWEKFNSEKVASLAYARIQGRASLVSHFQNSSLMNEDK 906
Query: 521 HYLPVYFSPPRDGKQVTEPLPIG 543
P+ F EP P+G
Sbjct: 907 RCRPILFQTEGPNAGDMEPFPVG 929
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 101 AAVTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPP 160
++V + ++ E +GD+R + + G V++ ++DLR A+ A+ A+ Q+K L
Sbjct: 278 SSVEDFELKTLFEQYGDIRTMYTACKHRGFVMISYFDLRAAQRAMQAL----QSKPLRSR 333
Query: 161 ARGVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRH 220
+ Y ++P +A + GT+++ +D V + ++IF +G IK+I
Sbjct: 334 KLDIHY--------SIPKVNAPEKDIGHGTLMLSGLDSSVSNDEFKRIFGFYGEIKDIYE 385
Query: 221 PQTKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRP 262
K +F+EF+D+R A AL +N EI G+ + +E P
Sbjct: 386 YPEMKHLKFIEFYDVRAAEAALRALNRIEIAGKQIKLEPGHP 427
>Medtr3g098620.4 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45043643-45036753 | 20130731
Length = 969
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 84/143 (58%), Gaps = 12/143 (8%)
Query: 401 DSRTTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVG 460
D+RTT+MIKNIPNKY+ K+L+ +D C +YDFLYLPIDF NKCNVG
Sbjct: 791 DNRTTLMIKNIPNKYTSKMLLTAIDESC------------RGTYDFLYLPIDFKNKCNVG 838
Query: 461 YGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIE 520
Y F+NM P + ++AFH + WE FNS K+ + YAR+QG AL HF+NS E +
Sbjct: 839 YAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSALIAHFQNSSLMNEDK 898
Query: 521 HYLPVYFSPPRDGKQVTEPLPIG 543
P+ F EP P+G
Sbjct: 899 RCRPILFHTDGPNAGDPEPFPLG 921
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 105 ESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPARGV 164
+S ++ E +GD+R + + G V++ +YDLR A+ A+ A+ Q + L+ +
Sbjct: 283 DSELKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKAL----QNRTLSSRKLDI 338
Query: 165 AYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTK 224
Y ++P + + GT+++ +D V + L++IF +G IKEI
Sbjct: 339 RY--------SIPKGNPTEKDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEM 390
Query: 225 KSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRP 262
+++EF+D+R A +L +NG + G+ + +E P
Sbjct: 391 NHIKYIEFYDVRGAEASLRSLNGICLAGKHIKLEPGHP 428
>Medtr3g098620.1 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044608-45036736 | 20130731
Length = 969
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 84/143 (58%), Gaps = 12/143 (8%)
Query: 401 DSRTTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVG 460
D+RTT+MIKNIPNKY+ K+L+ +D C +YDFLYLPIDF NKCNVG
Sbjct: 791 DNRTTLMIKNIPNKYTSKMLLTAIDESC------------RGTYDFLYLPIDFKNKCNVG 838
Query: 461 YGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIE 520
Y F+NM P + ++AFH + WE FNS K+ + YAR+QG AL HF+NS E +
Sbjct: 839 YAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSALIAHFQNSSLMNEDK 898
Query: 521 HYLPVYFSPPRDGKQVTEPLPIG 543
P+ F EP P+G
Sbjct: 899 RCRPILFHTDGPNAGDPEPFPLG 921
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 105 ESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPARGV 164
+S ++ E +GD+R + + G V++ +YDLR A+ A+ A+ Q + L+ +
Sbjct: 283 DSELKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKAL----QNRTLSSRKLDI 338
Query: 165 AYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTK 224
Y ++P + + GT+++ +D V + L++IF +G IKEI
Sbjct: 339 RY--------SIPKGNPTEKDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEM 390
Query: 225 KSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRP 262
+++EF+D+R A +L +NG + G+ + +E P
Sbjct: 391 NHIKYIEFYDVRGAEASLRSLNGICLAGKHIKLEPGHP 428
>Medtr3g448370.1 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165028 | 20130731
Length = 856
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 98/169 (57%), Gaps = 15/169 (8%)
Query: 359 SSVESMNQLQGRSNRPCRGRQARHDETRFLIQEDAASQSGCIDSRTTVMIKNIPNKYSQK 418
SS+E + +GRS RP E++ L Q D D+RTT+MIKNIPNKY+ K
Sbjct: 655 SSIEGFGE-RGRSRRP--DNIVNQVESKKLYQLDLDKIVNGEDTRTTLMIKNIPNKYTSK 711
Query: 419 LLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVGYGFVNMTSPEATLRLYKA 478
+L+ +D N Q +YDFLYLPIDF NKCNVGY F+NM SP + +KA
Sbjct: 712 MLLAAIDE-----NHQ-------GTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKA 759
Query: 479 FHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIEHYLPVYF 527
F+ + WE FNS K+ + YAR+QG AL HF+NS E + P+ F
Sbjct: 760 FNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILF 808
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Query: 103 VTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPAR 162
V +S +R E +GD+R + + G V++ +YD+R A TA+ A++ N P R
Sbjct: 209 VEDSELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--------NKPLR 260
Query: 163 GVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQ 222
D+ F++P + + NQGT+VVFN+D V + LRQIF +G +KEIR
Sbjct: 261 --RRKLDI--HFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETP 316
Query: 223 TKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRPG 263
K+ +F+EF+D+R A AL+ +N +I G+ + +E SRPG
Sbjct: 317 HKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPG 357
>Medtr3g448370.2 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165028 | 20130731
Length = 853
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 98/169 (57%), Gaps = 15/169 (8%)
Query: 359 SSVESMNQLQGRSNRPCRGRQARHDETRFLIQEDAASQSGCIDSRTTVMIKNIPNKYSQK 418
SS+E + +GRS RP E++ L Q D D+RTT+MIKNIPNKY+ K
Sbjct: 652 SSIEGFGE-RGRSRRP--DNIVNQVESKKLYQLDLDKIVNGEDTRTTLMIKNIPNKYTSK 708
Query: 419 LLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVGYGFVNMTSPEATLRLYKA 478
+L+ +D N Q +YDFLYLPIDF NKCNVGY F+NM SP + +KA
Sbjct: 709 MLLAAIDE-----NHQ-------GTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKA 756
Query: 479 FHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIEHYLPVYF 527
F+ + WE FNS K+ + YAR+QG AL HF+NS E + P+ F
Sbjct: 757 FNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILF 805
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Query: 103 VTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPAR 162
V +S +R E +GD+R + + G V++ +YD+R A TA+ A++ N P R
Sbjct: 206 VEDSELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--------NKPLR 257
Query: 163 GVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQ 222
D+ F++P + + NQGT+VVFN+D V + LRQIF +G +KEIR
Sbjct: 258 --RRKLDI--HFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETP 313
Query: 223 TKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRPG 263
K+ +F+EF+D+R A AL+ +N +I G+ + +E SRPG
Sbjct: 314 HKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPG 354
>Medtr3g448370.4 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16172198-16165028 | 20130731
Length = 867
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 98/169 (57%), Gaps = 15/169 (8%)
Query: 359 SSVESMNQLQGRSNRPCRGRQARHDETRFLIQEDAASQSGCIDSRTTVMIKNIPNKYSQK 418
SS+E + +GRS RP E++ L Q D D+RTT+MIKNIPNKY+ K
Sbjct: 666 SSIEGFGE-RGRSRRP--DNIVNQVESKKLYQLDLDKIVNGEDTRTTLMIKNIPNKYTSK 722
Query: 419 LLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVGYGFVNMTSPEATLRLYKA 478
+L+ +D N Q +YDFLYLPIDF NKCNVGY F+NM SP + +KA
Sbjct: 723 MLLAAIDE-----NHQ-------GTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKA 770
Query: 479 FHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIEHYLPVYF 527
F+ + WE FNS K+ + YAR+QG AL HF+NS E + P+ F
Sbjct: 771 FNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILF 819
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Query: 103 VTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPAR 162
V +S +R E +GD+R + + G V++ +YD+R A TA+ A++ N P R
Sbjct: 220 VEDSELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--------NKPLR 271
Query: 163 GVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQ 222
D+ F++P + + NQGT+VVFN+D V + LRQIF +G +KEIR
Sbjct: 272 --RRKLDI--HFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETP 327
Query: 223 TKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRPG 263
K+ +F+EF+D+R A AL+ +N +I G+ + +E SRPG
Sbjct: 328 HKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPG 368
>Medtr3g448370.5 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165361 | 20130731
Length = 876
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 98/169 (57%), Gaps = 15/169 (8%)
Query: 359 SSVESMNQLQGRSNRPCRGRQARHDETRFLIQEDAASQSGCIDSRTTVMIKNIPNKYSQK 418
SS+E + +GRS RP E++ L Q D D+RTT+MIKNIPNKY+ K
Sbjct: 655 SSIEGFGE-RGRSRRP--DNIVNQVESKKLYQLDLDKIVNGEDTRTTLMIKNIPNKYTSK 711
Query: 419 LLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVGYGFVNMTSPEATLRLYKA 478
+L+ +D N Q +YDFLYLPIDF NKCNVGY F+NM SP + +KA
Sbjct: 712 MLLAAIDE-----NHQ-------GTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKA 759
Query: 479 FHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIEHYLPVYF 527
F+ + WE FNS K+ + YAR+QG AL HF+NS E + P+ F
Sbjct: 760 FNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILF 808
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Query: 103 VTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPAR 162
V +S +R E +GD+R + + G V++ +YD+R A TA+ A++ N P R
Sbjct: 209 VEDSELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--------NKPLR 260
Query: 163 GVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQ 222
D+ F++P + + NQGT+VVFN+D V + LRQIF +G +KEIR
Sbjct: 261 --RRKLDI--HFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETP 316
Query: 223 TKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRPG 263
K+ +F+EF+D+R A AL+ +N +I G+ + +E SRPG
Sbjct: 317 HKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPG 357
>Medtr3g448370.3 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16170586-16165028 | 20130731
Length = 751
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 98/169 (57%), Gaps = 15/169 (8%)
Query: 359 SSVESMNQLQGRSNRPCRGRQARHDETRFLIQEDAASQSGCIDSRTTVMIKNIPNKYSQK 418
SS+E + +GRS RP E++ L Q D D+RTT+MIKNIPNKY+ K
Sbjct: 550 SSIEGFGE-RGRSRRP--DNIVNQVESKKLYQLDLDKIVNGEDTRTTLMIKNIPNKYTSK 606
Query: 419 LLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVGYGFVNMTSPEATLRLYKA 478
+L+ +D N Q +YDFLYLPIDF NKCNVGY F+NM SP + +KA
Sbjct: 607 MLLAAIDE-----NHQ-------GTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKA 654
Query: 479 FHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIEHYLPVYF 527
F+ + WE FNS K+ + YAR+QG AL HF+NS E + P+ F
Sbjct: 655 FNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILF 703
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Query: 103 VTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPAR 162
V +S +R E +GD+R + + G V++ +YD+R A TA+ A++ N P R
Sbjct: 104 VEDSELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--------NKPLR 155
Query: 163 GVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQ 222
D+ F++P + + NQGT+VVFN+D V + LRQIF +G +KEIR
Sbjct: 156 --RRKLDI--HFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETP 211
Query: 223 TKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRPG 263
K+ +F+EF+D+R A AL+ +N +I G+ + +E SRPG
Sbjct: 212 HKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPG 252
>Medtr3g098620.5 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044608-45037623 | 20130731
Length = 923
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 84/140 (60%), Gaps = 14/140 (10%)
Query: 401 DSRTTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVG 460
D+RTT+MIKNIPNKY+ K+L+ +D C +YDFLYLPIDF NKCNVG
Sbjct: 791 DNRTTLMIKNIPNKYTSKMLLTAIDESC------------RGTYDFLYLPIDFKNKCNVG 838
Query: 461 YGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIE 520
Y F+NM P + ++AFH + WE FNS K+ + YAR+QG AL HF+NS E +
Sbjct: 839 YAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSALIAHFQNSSLMNEDK 898
Query: 521 HYLPVYFSPPRDGKQVTEPL 540
P+ F DG +P+
Sbjct: 899 RCRPILFH--TDGPNAGDPM 916
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 105 ESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPARGV 164
+S ++ E +GD+R + + G V++ +YDLR A+ A+ A+ Q + L+ +
Sbjct: 283 DSELKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKAL----QNRTLSSRKLDI 338
Query: 165 AYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTK 224
Y ++P + + GT+++ +D V + L++IF +G IKEI
Sbjct: 339 RY--------SIPKGNPTEKDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEM 390
Query: 225 KSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRP 262
+++EF+D+R A +L +NG + G+ + +E P
Sbjct: 391 NHIKYIEFYDVRGAEASLRSLNGICLAGKHIKLEPGHP 428
>Medtr2g049640.2 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr2:21883965-21877390 | 20130731
Length = 865
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 16/156 (10%)
Query: 384 ETRFLIQEDAASQSGCIDSRTTVMIKNIPNKYSQKLLMNMLD-NHCIHYNEQIGDDQILS 442
+ + L Q D D+RTT+MIKNIPNKY+ K+L+ +D NH
Sbjct: 680 DNKKLFQLDLDKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHK-------------G 726
Query: 443 SYDFLYLPIDFNNKCNVGYGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQG 502
+YDFLYLPIDF NKCNVGY F+NM SP + Y+ FH + WE FNS K+ + YAR+QG
Sbjct: 727 TYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYETFHGKKWEKFNSEKVASLAYARIQG 786
Query: 503 LEALKEHFKNSKFPYEIEHYLPVYFSPPRDGKQVTE 538
AL HF+NS E + P+ F DG +V +
Sbjct: 787 KNALVNHFQNSSLMNEDKRCRPIVFH--SDGSEVAD 820
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Query: 103 VTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPAR 162
V ++ +R E +GD+R + + G V++ +YD+R A TA+ A++ N P R
Sbjct: 207 VEDTELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--------NKPLR 258
Query: 163 GVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQ 222
D+ F++P + + NQGT+VVFN+D V E LRQIF +G +KEIR
Sbjct: 259 --RRKLDI--HFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP 314
Query: 223 TKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRPG 263
K+ +F+E++D+R A AL+ +N +I G+ + +E SRPG
Sbjct: 315 HKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 355
>Medtr2g049640.1 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr2:21883858-21877390 | 20130731
Length = 865
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 16/156 (10%)
Query: 384 ETRFLIQEDAASQSGCIDSRTTVMIKNIPNKYSQKLLMNMLD-NHCIHYNEQIGDDQILS 442
+ + L Q D D+RTT+MIKNIPNKY+ K+L+ +D NH
Sbjct: 680 DNKKLFQLDLDKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHK-------------G 726
Query: 443 SYDFLYLPIDFNNKCNVGYGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQG 502
+YDFLYLPIDF NKCNVGY F+NM SP + Y+ FH + WE FNS K+ + YAR+QG
Sbjct: 727 TYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYETFHGKKWEKFNSEKVASLAYARIQG 786
Query: 503 LEALKEHFKNSKFPYEIEHYLPVYFSPPRDGKQVTE 538
AL HF+NS E + P+ F DG +V +
Sbjct: 787 KNALVNHFQNSSLMNEDKRCRPIVFH--SDGSEVAD 820
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Query: 103 VTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPAR 162
V ++ +R E +GD+R + + G V++ +YD+R A TA+ A++ N P R
Sbjct: 207 VEDTELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--------NKPLR 258
Query: 163 GVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQ 222
D+ F++P + + NQGT+VVFN+D V E LRQIF +G +KEIR
Sbjct: 259 --RRKLDI--HFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP 314
Query: 223 TKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRPG 263
K+ +F+E++D+R A AL+ +N +I G+ + +E SRPG
Sbjct: 315 HKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 355
>Medtr3g098620.3 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044605-45036753 | 20130731
Length = 923
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 85/142 (59%), Gaps = 14/142 (9%)
Query: 401 DSRTTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVG 460
D+RTT+MIKNIPNKY+ K+L+ +D C +YDFLYLPIDF NKCNVG
Sbjct: 791 DNRTTLMIKNIPNKYTSKMLLTAIDESC------------RGTYDFLYLPIDFKNKCNVG 838
Query: 461 YGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIE 520
Y F+NM P + ++AFH + WE FNS K+ + YAR+QG AL HF+NS E +
Sbjct: 839 YAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSALIAHFQNSSLMNEDK 898
Query: 521 HYLPVYFSPPRDGKQVTEPLPI 542
P+ F DG +P+ +
Sbjct: 899 RCRPILFH--TDGPNAGDPVNL 918
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 105 ESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPARGV 164
+S ++ E +GD+R + + G V++ +YDLR A+ A+ A+ Q + L+ +
Sbjct: 283 DSELKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKAL----QNRTLSSRKLDI 338
Query: 165 AYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTK 224
Y ++P + + GT+++ +D V + L++IF +G IKEI
Sbjct: 339 RY--------SIPKGNPTEKDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEM 390
Query: 225 KSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRP 262
+++EF+D+R A +L +NG + G+ + +E P
Sbjct: 391 NHIKYIEFYDVRGAEASLRSLNGICLAGKHIKLEPGHP 428
>Medtr3g098620.2 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044593-45036753 | 20130731
Length = 923
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 85/142 (59%), Gaps = 14/142 (9%)
Query: 401 DSRTTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVG 460
D+RTT+MIKNIPNKY+ K+L+ +D C +YDFLYLPIDF NKCNVG
Sbjct: 791 DNRTTLMIKNIPNKYTSKMLLTAIDESC------------RGTYDFLYLPIDFKNKCNVG 838
Query: 461 YGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIE 520
Y F+NM P + ++AFH + WE FNS K+ + YAR+QG AL HF+NS E +
Sbjct: 839 YAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSALIAHFQNSSLMNEDK 898
Query: 521 HYLPVYFSPPRDGKQVTEPLPI 542
P+ F DG +P+ +
Sbjct: 899 RCRPILFH--TDGPNAGDPVNL 918
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 105 ESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPARGV 164
+S ++ E +GD+R + + G V++ +YDLR A+ A+ A+ Q + L+ +
Sbjct: 283 DSELKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKAL----QNRTLSSRKLDI 338
Query: 165 AYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTK 224
Y ++P + + GT+++ +D V + L++IF +G IKEI
Sbjct: 339 RY--------SIPKGNPTEKDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEM 390
Query: 225 KSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSRP 262
+++EF+D+R A +L +NG + G+ + +E P
Sbjct: 391 NHIKYIEFYDVRGAEASLRSLNGICLAGKHIKLEPGHP 428
>Medtr7g020950.1 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr7:6550688-6555387 | 20130731
Length = 822
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 88/153 (57%), Gaps = 16/153 (10%)
Query: 401 DSRTTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVG 460
D+RTT+MIKNIPNKY+ K+L+ +D H +YDF+YLPIDF NKCNVG
Sbjct: 671 DNRTTLMIKNIPNKYTSKMLLAAIDEHH------------KGAYDFVYLPIDFRNKCNVG 718
Query: 461 YGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIE 520
Y F+NMTSP + Y+ F+ + WE FNS K+ + YAR+QG AL HF+NS E +
Sbjct: 719 YAFINMTSPSLIVPFYQGFNGKKWEKFNSEKVASLAYARIQGKAALVAHFQNSSLMNEDK 778
Query: 521 HYLPVYFSP--PRDGKQVTEPLPIGQSNKHSRS 551
P+ P G QV P PI RS
Sbjct: 779 RCRPILIDTDGPNAGDQV--PFPIAMKPGRMRS 809
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 103 VTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAI--RLQQQTKLLNPP 160
V +S ++ E FGD+ + +G+ ++ +YD+R A+ A+ A+ RL + K
Sbjct: 204 VKDSVLKALFEQFGDIHTFDRTCKHQGSAMISYYDIRAAQNAMRALNNRLFGRKKF---- 259
Query: 161 ARGVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRH 220
D+ + +P G NQGT+ VF D + L+ I +G IKEI
Sbjct: 260 --------DI--HYPIPKDSPSRNGVNQGTLEVFLYDSSISNTELQHILNVYGGIKEIHE 309
Query: 221 PQTKKSQRFVEFFDIRDAANALEHMN 246
+ + +EF+D R A AL +N
Sbjct: 310 NPRSQRHKLIEFYDFRAADAALHGIN 335
>Medtr7g020950.2 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr7:6551414-6555856 | 20130731
Length = 738
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 357 RDSSVESMNQLQGRSNRPCRGRQARHDETRFLIQEDAASQSGCIDSRTTVMIKNIPNKYS 416
R+ + S + + +R G D R+ + D + D+RTT+MIKNIPNKY+
Sbjct: 545 RNHMINSFDTYKRVRSRRNVGASNLADMKRYELDIDCIKRGE--DNRTTLMIKNIPNKYT 602
Query: 417 QKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVGYGFVNMTSPEATLRLY 476
K+L+ +D H +YDF+YLPIDF NKCNVGY F+NMTSP + Y
Sbjct: 603 SKMLLAAIDEHH------------KGAYDFVYLPIDFRNKCNVGYAFINMTSPSLIVPFY 650
Query: 477 KAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIEHYLPVYFSP--PRDGK 534
+ F+ + WE FNS K+ + YAR+QG AL HF+NS E + P+ P G
Sbjct: 651 QGFNGKKWEKFNSEKVASLAYARIQGKAALVAHFQNSSLMNEDKRCRPILIDTDGPNAGD 710
Query: 535 QVTEPLPIGQSNKHSRS 551
QV P PI RS
Sbjct: 711 QV--PFPIAMKPGRMRS 725
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 103 VTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAI--RLQQQTKLLNPP 160
V +S ++ E FGD+ + +G+ ++ +YD+R A+ A+ A+ RL + K
Sbjct: 138 VKDSVLKALFEQFGDIHTFDRTCKHQGSAMISYYDIRAAQNAMRALNNRLFGRKKF---- 193
Query: 161 ARGVAYGCDVWAQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRH 220
D+ + +P G NQGT+ VF D + L+ I +G IKEI
Sbjct: 194 --------DI--HYPIPKDSPSRNGVNQGTLEVFLYDSSISNTELQHILNVYGGIKEIHE 243
Query: 221 PQTKKSQRFVEFFDIRDAANALEHMN 246
+ + +EF+D R A AL +N
Sbjct: 244 NPRSQRHKLIEFYDFRAADAALHGIN 269
>Medtr4g071310.1 | RNA recognition motif 3 in plant MEI2-like
protein | LC | chr4:26913075-26914475 | 20130731
Length = 336
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 84/132 (63%), Gaps = 2/132 (1%)
Query: 404 TTVMIKNIPNKYSQKLLMNMLDNHCIHYN--EQIGDDQILSSYDFLYLPIDFNNKCNVGY 461
TTVMIKNIP+KY++ L++ L+ C+ N +Q ++ +++ +YLPIDF + N GY
Sbjct: 188 TTVMIKNIPSKYTRDKLLDFLEEFCMRENAKDQANGEESTFAFNAVYLPIDFCTELNKGY 247
Query: 462 GFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIEH 521
FVN T EA + + WE FNS KIC+V AR+QG E L+ HF + FPY E
Sbjct: 248 AFVNFTKHEAAWKFQLTASGKNWEHFNSSKICDVVAARLQGKEKLENHFGSMVFPYSSEE 307
Query: 522 YLPVYFSPPRDG 533
LP++FSPPRDG
Sbjct: 308 VLPLFFSPPRDG 319
>Medtr7g118210.1 | RNA recognition motif 2 in plant MEI2-like
protein, putative | HC | chr7:49062258-49057045 |
20130731
Length = 751
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 74/138 (53%), Gaps = 30/138 (21%)
Query: 401 DSRTTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDFNNKCNVG 460
D+RTT+MIKNIPNK +YDF+YLPIDF NKCN G
Sbjct: 569 DNRTTLMIKNIPNK----------------------------TYDFVYLPIDFRNKCNAG 600
Query: 461 YGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPYEIE 520
Y F+NMTSP + Y+AF+ + WE FNS K+ + YAR+QG AL HF++S +
Sbjct: 601 YAFINMTSPSLIIPFYEAFNGKKWEKFNSEKVASLAYARIQGKTALVNHFQHSSLMNVDK 660
Query: 521 HYLPVYFSP--PRDGKQV 536
H P+ P G QV
Sbjct: 661 HCRPILIDTDGPNAGDQV 678
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 101 AAVTESSVRRQLEIFGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPP 160
+ V +S ++ E FGD+ + + +G ++ +YD+R A+ A+ A++ Q
Sbjct: 140 SEVEDSELKALFEQFGDIDTFDRDCKHQGNAMISYYDMRAAQKAMRALQNQ--------- 190
Query: 161 ARGVAYGCDVW-AQFTLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIR 219
+ C + +++P +G NQGT+ VF D + + IF G IKEI
Sbjct: 191 ----LFSCRKFDIHYSIPKDSPSRKGVNQGTLAVFLYDSSISNTEIHNIFNVHGDIKEIH 246
Query: 220 HPQTKKSQRFVEFFDIRDAANALEHMNGKEIHGRPVVIEFSR 261
+ +EF++ A AL +N + + + +E S+
Sbjct: 247 ENPHSWHHKLIEFYNFEAAEKALHDLNRNDTSMKRLKVEPSQ 288
>Medtr0166s0040.1 | RNA recognition motif 3 in plant MEI2-like
protein | LC | scaffold0166:32284-33677 | 20130731
Length = 200
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 404 TTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDF------NNKC 457
TTVMI+NIPN++ L+ +LD HC N+ + D S +DF+YLP+D+
Sbjct: 41 TTVMIRNIPNQFRFDNLLMILDVHCFEINKILDDPADWSKFDFVYLPMDYMKHAVKGKMS 100
Query: 458 NVGYGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPY 517
N+GY FVN T+P A + YK F W V + KICE+ A+ QG E+L F F
Sbjct: 101 NLGYAFVNFTTPSAAFKFYKQFQGFAWNVTQNPKICEINAAKYQGKESLIRIFSQKVFRC 160
Query: 518 EIEHYLPVYFSPPRDGKQVTEPLPIGQSNKHSRSFSIGSH 557
+ +LP+ FS RDG N+ SIG H
Sbjct: 161 KNPDFLPILFSAGRDG-----------FNRRMSGISIGIH 189
>Medtr5g059640.1 | RNA recognition motif 3 in plant MEI2-like
protein | LC | chr5:24789901-24791294 | 20130731
Length = 200
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 17/160 (10%)
Query: 404 TTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDF------NNKC 457
TTVMI+NIPN++ L+ +LD HC N+ + D S +DF+YLP+D+
Sbjct: 41 TTVMIRNIPNQFRFDNLLMILDVHCFEINKILDDPADWSKFDFVYLPMDYMKHAVKGKMS 100
Query: 458 NVGYGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPY 517
N+GY FVN T+P A + YK F W V + KICE+ A+ QG E+L F F
Sbjct: 101 NLGYAFVNFTTPSAAFKFYKQFQGFAWNVTXNPKICEINAAKYQGKESLIRIFSQKVFRC 160
Query: 518 EIEHYLPVYFSPPRDGKQVTEPLPIGQSNKHSRSFSIGSH 557
+ +LP+ FS RDG N+ SIG H
Sbjct: 161 KNPDFLPILFSAGRDG-----------FNRRMSGISIGIH 189
>Medtr5g059620.1 | RNA recognition motif 3 in plant MEI2-like
protein | LC | chr5:24780295-24778287 | 20130731
Length = 233
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
Query: 404 TTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDF------NNKC 457
TTVMI+NIPN++ L+ +LD+HC N+ D + S Y+ +YLP+D+
Sbjct: 73 TTVMIRNIPNQFRFDNLLKILDDHCFEINKN-ADPEDWSKYNIVYLPMDYMKHALERRMS 131
Query: 458 NVGYGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPY 517
N+GY FVN T+P A + YK F+ W V +RKICE+ A+ QG E+L F F
Sbjct: 132 NLGYAFVNFTTPAAAFKFYKQFNGFAWNVRQNRKICEINAAQHQGKESLIMIFSQKVFRC 191
Query: 518 EIEHYLPVYFSPPRDGKQVTEPLPIGQSNKHSRSFSIGSH 557
+ +LP+ FS RDG N+ SIG H
Sbjct: 192 KNPDFLPILFSAGRDG-----------FNRRMSGISIGIH 220
>Medtr0166s0030.1 | RNA recognition motif 3 in plant MEI2-like
protein | LC | scaffold0166:22678-20443 | 20130731
Length = 253
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
Query: 404 TTVMIKNIPNKYSQKLLMNMLDNHCIHYNEQIGDDQILSSYDFLYLPIDF------NNKC 457
TTVMI+NIPN++ L+ +LD+HC N+ D + S Y+ +YLP+D+
Sbjct: 73 TTVMIRNIPNQFRFDNLLKILDDHCFEINKN-ADPEDWSKYNIVYLPMDYMKHALERRMS 131
Query: 458 NVGYGFVNMTSPEATLRLYKAFHHQPWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPY 517
N+GY FVN T+P A + YK F+ W V +RKICE+ A+ QG E+L F F
Sbjct: 132 NLGYAFVNFTTPAAAFKFYKQFNGFAWNVRQNRKICEINAAQHQGKESLIMIFSQKVFRC 191
Query: 518 EIEHYLPVYFSPPRDGKQVTEPLPIGQSNKHSRSFSIGSH 557
+ +LP+ FS RDG N+ SIG H
Sbjct: 192 KNPDFLPILFSAGRDG-----------FNRRMSGISIGIH 220
>Medtr5g068540.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
LC | chr5:29018170-29014149 | 20130731
Length = 369
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 14/144 (9%)
Query: 118 VRGVQMERRCE--GTVIVHFYDLRHAETALAAIRLQQQTKLLNPPARGVAYGCDVWAQFT 175
+R + + +RC G V++ +YD+R A TA+ A+ Q K L AR + + F+
Sbjct: 114 LRTLTLYKRCRHRGFVMISYYDIRAACTAMHAL----QDKTLG--ARNLDF------HFS 161
Query: 176 LPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTKKSQRFVEFFDI 235
P + + NQGT+VVFN+D V + L QI +G +KEIR K+ +F+EF+D+
Sbjct: 162 NPKDNPSQKDINQGTLVVFNLDLSVSNDDLHQICGAYGEVKEIRETPNKRDHKFIEFYDV 221
Query: 236 RDAANALEHMNGKEIHGRPVVIEF 259
R A AL+ +N +I G IE
Sbjct: 222 RAADAALKALNQSDISGHGGGIEL 245
>Medtr5g058270.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr5:24087213-24086146 | 20130731
Length = 141
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 12/141 (8%)
Query: 115 FGDVRGVQMERRCEGTVIVHFYDLRHAETALAAIRLQQQTKLLNPPARGVAYGCDVWAQF 174
+GD+R + R G V++ +YD+R A +A+ A+ Q K L G ++ F
Sbjct: 11 YGDIRTLYKRCRHRGFVMISYYDIRAACSAMHAL----QDKPLG--------GRNLDIHF 58
Query: 175 TLPARDAVPEGQNQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTKKSQRFVEFFD 234
+ P + + NQGT VVFN+D V + L QI +G +KEIR K+ +F+EF+D
Sbjct: 59 SNPKDNPSQKDINQGTFVVFNLDLSVSNDDLHQICGAYGEVKEIRESPNKRDHKFIEFYD 118
Query: 235 IRDAANALEHMNGKEIHGRPV 255
+R A A++ +N +I G+ +
Sbjct: 119 VRAADAAVKELNQSDIAGKRI 139
>Medtr6g012500.1 | pollen allergen protein | LC |
chr6:3804518-3803334 | 20130731
Length = 282
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 404 TTVMIKN--IPNKYSQKLLMNMLDNHCIHYN--EQIGDDQILSSYDFLYLPIDFNNKCNV 459
TTVMI+ IP KYS+ L+ L+ HC+ N +Q ++ ++DFLYLPIDF + N
Sbjct: 70 TTVMIEKHYIPTKYSRDKLLAFLEEHCMFENAIDQSNGEESTFAFDFLYLPIDFKTELNN 129
Query: 460 GYGFVNMTS 468
GY FVN S
Sbjct: 130 GYAFVNSLS 138
>Medtr3g083550.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr3:37716900-37714302 | 20130731
Length = 248
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 190 TVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTKKSQR-----FVEFFDIRDAANALEH 244
+++V N+ D PE LR+ F FGP+K+I P+ + + F++F D DAA+A H
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGHFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKYH 101
Query: 245 MNGKEIHGRPVVIEFSRPGRK 265
M+G+ + GR + + F+ RK
Sbjct: 102 MDGQVLLGREITVVFAEENRK 122
>Medtr1g054675.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr1:23814162-23811233 | 20130731
Length = 220
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 190 TVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTKKSQR-----FVEFFDIRDAANALEH 244
+++V N+ D PE L F FGP+K++ P+ + FV+F D DAA+A H
Sbjct: 44 SLLVRNLAKDCRPEDLHDPFGQFGPVKDVYLPRDYYTGEPRGFGFVQFVDPADAADAKYH 103
Query: 245 MNGKEIHGRPVVIEFSRPGRK 265
M+G+ + GR + + F+ RK
Sbjct: 104 MDGQVLLGRELTVVFAEENRK 124
>Medtr5g079870.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr5:34159851-34164480 | 20130731
Length = 249
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 187 NQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTKKSQR-----FVEFFDIRDAANA 241
N G+++V N+ D PE LR FE FGP++++ P+ S + FV+F D +A+ A
Sbjct: 45 NNGSLLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVDAYEASEA 104
Query: 242 LEHMNGKEIHGRPVVIEFSRPGRK 265
HM+ + GR + + + RK
Sbjct: 105 QYHMDRQIFAGREISVVVAAETRK 128
>Medtr5g079870.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr5:34159814-34164480 | 20130731
Length = 286
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 187 NQGTVVVFNVDWDVEPETLRQIFEDFGPIKEIRHPQTKKSQR-----FVEFFDIRDAANA 241
N G+++V N+ D PE LR FE FGP++++ P+ S + FV+F D +A+ A
Sbjct: 45 NNGSLLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVDAYEASEA 104
Query: 242 LEHMNGKEIHGRPVVI 257
HM+ + GR + +
Sbjct: 105 QYHMDRQIFAGREISV 120