Miyakogusa Predicted Gene

Lj4g3v2717030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2717030.1 CUFF.51543.1
         (193 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g089550.1 | CAAX amino terminal protease family protein | ...   268   3e-72
Medtr8g089550.2 | CAAX amino terminal protease family protein | ...   261   3e-70

>Medtr8g089550.1 | CAAX amino terminal protease family protein | HC
           | chr8:37219961-37224159 | 20130731
          Length = 276

 Score =  268 bits (684), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 140/191 (73%), Positives = 154/191 (80%), Gaps = 10/191 (5%)

Query: 1   MATLSLTLNCCCCWSTVKYAHTIYPAPIINLLHRRRYSTCSFAKKRLKKSNRDVPETFED 60
           M  LS TLN   C ST  +AHT Y      L HR RY+TCSFAKK    S R+ PE F D
Sbjct: 3   MLYLSHTLNSWSCCST--FAHTTY---FTTLPHRSRYNTCSFAKK----SKREGPEAFVD 53

Query: 61  LSDDKFVQNDNL-DTSLNPAAQNSNPMPSRNAVLQACTITSALIAAVGIVIRQVSHIASI 119
           LSDDKFVQNDNL DTSLNP  +N+NP+PSR+AVLQAC +TSALIAA G VIRQVSH+ASI
Sbjct: 54  LSDDKFVQNDNLLDTSLNPPVENANPIPSRSAVLQACILTSALIAAFGTVIRQVSHVASI 113

Query: 120 EGLPVLDCSTEVSFGFETWHLELITGLVVLISSCRFLLLKTWPDFAESSEAANQQVLSSL 179
           EGLPVLDCSTEVSFGFE WHLELITG+VVLISS R+LLLKTWPDFAESS+AAN+QVLSSL
Sbjct: 114 EGLPVLDCSTEVSFGFEMWHLELITGIVVLISSSRYLLLKTWPDFAESSKAANRQVLSSL 173

Query: 180 QPLDYIVVRIF 190
           QPLDYI V + 
Sbjct: 174 QPLDYIAVAVL 184


>Medtr8g089550.2 | CAAX amino terminal protease family protein | HC
           | chr8:37219961-37224368 | 20130731
          Length = 245

 Score =  261 bits (667), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 140/190 (73%), Positives = 154/190 (81%), Gaps = 10/190 (5%)

Query: 1   MATLSLTLNCCCCWSTVKYAHTIYPAPIINLLHRRRYSTCSFAKKRLKKSNRDVPETFED 60
           M  LS TLN   C ST  +AHT Y      L HR RY+TCSFAKK    S R+ PE F D
Sbjct: 3   MLYLSHTLNSWSCCST--FAHTTY---FTTLPHRSRYNTCSFAKK----SKREGPEAFVD 53

Query: 61  LSDDKFVQNDNL-DTSLNPAAQNSNPMPSRNAVLQACTITSALIAAVGIVIRQVSHIASI 119
           LSDDKFVQNDNL DTSLNP  +N+NP+PSR+AVLQAC +TSALIAA G VIRQVSH+ASI
Sbjct: 54  LSDDKFVQNDNLLDTSLNPPVENANPIPSRSAVLQACILTSALIAAFGTVIRQVSHVASI 113

Query: 120 EGLPVLDCSTEVSFGFETWHLELITGLVVLISSCRFLLLKTWPDFAESSEAANQQVLSSL 179
           EGLPVLDCSTEVSFGFE WHLELITG+VVLISS R+LLLKTWPDFAESS+AAN+QVLSSL
Sbjct: 114 EGLPVLDCSTEVSFGFEMWHLELITGIVVLISSSRYLLLKTWPDFAESSKAANRQVLSSL 173

Query: 180 QPLDYIVVRI 189
           QPLDYI V +
Sbjct: 174 QPLDYIAVAV 183