Miyakogusa Predicted Gene

Lj4g3v2704760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2704760.1 Non Characterized Hit- tr|B9SI30|B9SI30_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,61.25,2e-19,seg,NULL,NODE_52891_length_308_cov_20.983767.path2.1
         (108 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g464000.1 | glycosyltransferase family 90 protein | HC | c...   149   8e-37

>Medtr3g464000.1 | glycosyltransferase family 90 protein | HC |
          chr3:25695614-25700080 | 20130731
          Length = 466

 Score =  149 bits (375), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%)

Query: 1  MGHSSKHYPRSPTYLYPSVVALSLFSITVLLLYKVDDVVSRTGTVVGHNLEPTPWHVFPH 60
          M HSSKH PR+PTYL P V+ALS FS+T LLLYKVDDV SRTGTVVGHNLEPTPWHVFP 
Sbjct: 1  MAHSSKHTPRTPTYLLPCVIALSFFSLTALLLYKVDDVASRTGTVVGHNLEPTPWHVFPT 60

Query: 61 KTFDEESRHGRAYKIIQCSYLTC 83
          K+FDEE+R  RAYKIIQCSYLTC
Sbjct: 61 KSFDEETRQSRAYKIIQCSYLTC 83