Miyakogusa Predicted Gene

Lj4g3v2704660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2704660.1 Non Characterized Hit- tr|I3SSW3|I3SSW3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=3
SV=1,97.8,1.4013e-45,Ribosomal_L7Ae,Ribosomal protein
L7Ae/L30e/S12e/Gadd45; RIBOSOMAL_L30E_1,Ribosomal protein L30e,
con,CUFF.51514.1
         (91 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g021030.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family...   186   5e-48
Medtr0024s0220.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 famil...   183   3e-47
Medtr5g088740.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family...   174   1e-44
Medtr0024s0220.2 | ribosomal protein L7Ae/L30e/S12e/Gadd45 famil...   161   2e-40
Medtr7g021030.2 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family...   113   4e-26

>Medtr7g021030.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family
           protein | HC | chr7:6597399-6599718 | 20130731
          Length = 112

 Score =  186 bits (471), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 88/91 (96%), Positives = 91/91 (100%)

Query: 1   MKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 60
           MKSGK+TLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL
Sbjct: 22  MKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 81

Query: 61  GTACGKYYRVCCLSIIDPGDSDIIKTLPGDQ 91
           GTACGKYYRVCCLSI+DPGDSDIIKT+PGDQ
Sbjct: 82  GTACGKYYRVCCLSIVDPGDSDIIKTIPGDQ 112


>Medtr0024s0220.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family
           protein | HC | scaffold0024:96431-99896 | 20130731
          Length = 112

 Score =  183 bits (464), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 86/91 (94%), Positives = 91/91 (100%)

Query: 1   MKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 60
           MKSGK+TLGYKTVLKSLR++KGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL
Sbjct: 22  MKSGKYTLGYKTVLKSLRNNKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 81

Query: 61  GTACGKYYRVCCLSIIDPGDSDIIKTLPGDQ 91
           GTACGKYYRVCCLSI+DPGDSDIIKT+PGDQ
Sbjct: 82  GTACGKYYRVCCLSIVDPGDSDIIKTIPGDQ 112


>Medtr5g088740.1 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family
           protein | HC | chr5:38527188-38527526 | 20130731
          Length = 112

 Score =  174 bits (442), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 82/91 (90%), Positives = 88/91 (96%)

Query: 1   MKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 60
           MK+GK+TLGYKTVLKSLRSSKGKLII ANNCPPLRKSE EYYAMLAKVGV+H+NGNNVDL
Sbjct: 22  MKTGKYTLGYKTVLKSLRSSKGKLIITANNCPPLRKSEFEYYAMLAKVGVYHHNGNNVDL 81

Query: 61  GTACGKYYRVCCLSIIDPGDSDIIKTLPGDQ 91
           GTACGKYYRVCCL IIDPGDSDIIKT+PG+Q
Sbjct: 82  GTACGKYYRVCCLGIIDPGDSDIIKTIPGEQ 112


>Medtr0024s0220.2 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family
           protein | HC | scaffold0024:96431-99543 | 20130731
          Length = 109

 Score =  161 bits (407), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 75/80 (93%), Positives = 80/80 (100%)

Query: 1   MKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 60
           MKSGK+TLGYKTVLKSLR++KGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL
Sbjct: 22  MKSGKYTLGYKTVLKSLRNNKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 81

Query: 61  GTACGKYYRVCCLSIIDPGD 80
           GTACGKYYRVCCLSI+DPG+
Sbjct: 82  GTACGKYYRVCCLSIVDPGN 101


>Medtr7g021030.2 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family
          protein | HC | chr7:6597399-6598733 | 20130731
          Length = 81

 Score =  113 bits (283), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 54/58 (93%), Positives = 57/58 (98%)

Query: 1  MKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNV 58
          MKSGK+TLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNG+ +
Sbjct: 22 MKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSKL 79