Miyakogusa Predicted Gene

Lj4g3v2693590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2693590.1 Non Characterized Hit- tr|I1K4A3|I1K4A3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13289
PE,87.63,0,ZINC-BINDING PROTEIN (YIPPEE), PUTATIVE,NULL; FAD NAD
BINDING OXIDOREDUCTASES,NULL; GCV_T,Glycine cl,CUFF.51518.1
         (420 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088790.1 | glycine cleavage T-protein aminomethyltransfer...   672   0.0  
Medtr4g132360.2 | glycine cleavage system T protein | HC | chr4:...    64   2e-10
Medtr4g132360.1 | glycine cleavage system T protein | HC | chr4:...    64   4e-10

>Medtr8g088790.1 | glycine cleavage T-protein aminomethyltransferase
           | HC | chr8:36886094-36879713 | 20130731
          Length = 422

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/424 (80%), Positives = 366/424 (86%), Gaps = 6/424 (1%)

Query: 1   MTTVSSLASTCLSPRSKPRC-LSVSPKPCFPRNXX---XXXXXXXXXXISWSISAHASPF 56
           MTT+S    +C + R++P    S+  KPC   N               IS+SISA +S F
Sbjct: 1   MTTLS--LPSCFNLRNQPWSPSSLFLKPCLLPNLSFCSHQRNKKNKNQISYSISAQSSSF 58

Query: 57  DLSPPPIDHDFLDAVKTAGAEVSGDGIVETFHTDEEALDAADNGVAVVDLSHFGRIRVSG 116
           DLSPPPIDHDFLD VKTAGAEVSG+GIVETFH DEEALDAADNGV VVDLSHFGRIRVSG
Sbjct: 59  DLSPPPIDHDFLDTVKTAGAEVSGEGIVETFHNDEEALDAADNGVVVVDLSHFGRIRVSG 118

Query: 117 EDRIQFLHNQSTANFECLQPGQGCDTVFVTPTARTIDIAHAWVMKNAITLVVSPETCGTI 176
           +DR+QFLHNQSTANFE LQ GQGCDTVFVTPTARTIDIAHAW+MKNAITLVVS ET  TI
Sbjct: 119 DDRVQFLHNQSTANFEGLQAGQGCDTVFVTPTARTIDIAHAWIMKNAITLVVSAETSRTI 178

Query: 177 TEMLNKYIFFGDKVEIQDITKLTSLFVLVGPKSGQVMENLNLGDLIGKPYGAHQHFNVDK 236
           TEMLNKYIFF DKVEIQDITK TSLFVL GPKSGQVME+LNLGDLIGKPYG HQHF VDK
Sbjct: 179 TEMLNKYIFFADKVEIQDITKQTSLFVLAGPKSGQVMESLNLGDLIGKPYGTHQHFYVDK 238

Query: 237 QPVTIGVGNLLSEDGFSLLMSPAAAPSVWEAILAQGAVPMGSNGWNKLRVIRGRPAPGME 296
           QP+TIGVGN++SE GFSL+MSPAAAPSVW+AILAQGAV MGSN WNKLRVI+GRPAPGME
Sbjct: 239 QPITIGVGNIISEGGFSLMMSPAAAPSVWKAILAQGAVAMGSNAWNKLRVIQGRPAPGME 298

Query: 297 LTKEFNVLEAHLWNSISLNKGCYKGQETIARLITYDGVKQRLWGFHLSAAAEPGSIITVD 356
           LT EFNV+EA LWNSISLNKGCYKGQETIARLITYDGVKQRLWGFHLSAAAEPGSIITVD
Sbjct: 299 LTNEFNVMEACLWNSISLNKGCYKGQETIARLITYDGVKQRLWGFHLSAAAEPGSIITVD 358

Query: 357 GKKIGKLTSYTSGRKQSEHFGLGYIKRQAALEGDTVIVGDNISGTVVEVPFLYQQRPPSG 416
           GKK+GKLTSY SGRK SEHFGLGYIKRQ A EGD+VIVGDNI GT+VE PFL QQRP SG
Sbjct: 359 GKKVGKLTSYASGRKPSEHFGLGYIKRQTASEGDSVIVGDNIIGTIVEAPFLSQQRPLSG 418

Query: 417 SSTS 420
           SS+S
Sbjct: 419 SSSS 422


>Medtr4g132360.2 | glycine cleavage system T protein | HC |
           chr4:55312901-55316500 | 20130731
          Length = 407

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 141/334 (42%), Gaps = 19/334 (5%)

Query: 91  EEALDAADNGVAVVDLSHFGRIRVSGEDRIQFLHNQSTANFECLQPGQGCDTVFVTPTAR 150
           +  L+   NG ++ D++H   + + G+D + FL     A+   L PG G  TVF      
Sbjct: 69  DSTLNCRQNG-SLFDVAHMCGLSLKGKDAVSFLEKLVIADVAALAPGTGTLTVFTNEKGG 127

Query: 151 TIDIAH-AWVMKNAITLVVSP----ETCGTITEMLNKYIFFGDKVEIQDITKLTSLFVLV 205
            ID +    V  + I LVV+     +    I E +  +   G  V    I    +L  L 
Sbjct: 128 AIDDSVITKVTDHHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWH-IHDERTLLALQ 186

Query: 206 GPKSGQVMENLNLGDLIGKPYGAHQHFNVDKQPVTIGVGNLLSEDGFSLLMSPAAAPSVW 265
           GP +  V+++L   DL    +G  +  +++     +       EDGF + +       + 
Sbjct: 187 GPLAAPVLQHLTKDDLSKLYFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVDLA 246

Query: 266 EAIL--AQGAVPM-GSNGWNKLRVIRGRPAPGMELTKEFNVLEAHLWNSISLNK---GCY 319
           +AIL  ++G + + G    + LR+  G    G ++ +    +EA L  +I   +   G +
Sbjct: 247 KAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHITPIEAGLTWAIGKRRRAEGGF 306

Query: 320 KGQETIARLITYDGVKQRLWGFHLSA--AAEPGSIITVDGKKIGKLTSYTSGRKQSEHFG 377
            G + I + +  DG   R  GF  S   A     I    G  IG++TS        ++  
Sbjct: 307 LGADVILKQLA-DGPSIRRVGFISSGPPARSHSEIQDEGGNNIGEVTSGGFSPCLKKNIA 365

Query: 378 LGYIK---RQAALEGDTVIVGDNISGTVVEVPFL 408
           +GY+K    +A  +   +I G    G V ++PF+
Sbjct: 366 MGYVKSGLHKAGTKVKIIIRGKANEGVVTKMPFV 399


>Medtr4g132360.1 | glycine cleavage system T protein | HC |
           chr4:55312665-55316448 | 20130731
          Length = 433

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 141/334 (42%), Gaps = 19/334 (5%)

Query: 91  EEALDAADNGVAVVDLSHFGRIRVSGEDRIQFLHNQSTANFECLQPGQGCDTVFVTPTAR 150
           +  L+   NG ++ D++H   + + G+D + FL     A+   L PG G  TVF      
Sbjct: 95  DSTLNCRQNG-SLFDVAHMCGLSLKGKDAVSFLEKLVIADVAALAPGTGTLTVFTNEKGG 153

Query: 151 TIDIAH-AWVMKNAITLVVSP----ETCGTITEMLNKYIFFGDKVEIQDITKLTSLFVLV 205
            ID +    V  + I LVV+     +    I E +  +   G  V    I    +L  L 
Sbjct: 154 AIDDSVITKVTDHHIYLVVNAGCRDKDLAHIEEHMKAFKAKGGDVSWH-IHDERTLLALQ 212

Query: 206 GPKSGQVMENLNLGDLIGKPYGAHQHFNVDKQPVTIGVGNLLSEDGFSLLMSPAAAPSVW 265
           GP +  V+++L   DL    +G  +  +++     +       EDGF + +       + 
Sbjct: 213 GPLAAPVLQHLTKDDLSKLYFGEFRVLDINGSQCFLTRTGYTGEDGFEISVPSEHGVDLA 272

Query: 266 EAIL--AQGAVPM-GSNGWNKLRVIRGRPAPGMELTKEFNVLEAHLWNSISLNK---GCY 319
           +AIL  ++G + + G    + LR+  G    G ++ +    +EA L  +I   +   G +
Sbjct: 273 KAILEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHITPIEAGLTWAIGKRRRAEGGF 332

Query: 320 KGQETIARLITYDGVKQRLWGFHLSA--AAEPGSIITVDGKKIGKLTSYTSGRKQSEHFG 377
            G + I + +  DG   R  GF  S   A     I    G  IG++TS        ++  
Sbjct: 333 LGADVILKQLA-DGPSIRRVGFISSGPPARSHSEIQDEGGNNIGEVTSGGFSPCLKKNIA 391

Query: 378 LGYIK---RQAALEGDTVIVGDNISGTVVEVPFL 408
           +GY+K    +A  +   +I G    G V ++PF+
Sbjct: 392 MGYVKSGLHKAGTKVKIIIRGKANEGVVTKMPFV 425