Miyakogusa Predicted Gene
- Lj4g3v2692430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2692430.1 tr|G7INR2|G7INR2_MEDTR ATP-dependent DNA helicase
Q1 OS=Medicago truncatula GN=MTR_2g006440 PE=4 SV=,77.35,0,recQ_fam:
ATP-dependent DNA helicase, RecQ family,DNA helicase, ATP-dependent,
RecQ type; P-loop con,CUFF.51500.1
(734 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein... 1144 0.0
Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC | ... 348 8e-96
Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein... 328 1e-89
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 281 1e-75
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 281 1e-75
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 241 2e-63
Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC | ... 206 9e-53
Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC | ... 128 2e-29
Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC | ... 128 2e-29
Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC | ... 128 2e-29
Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC | ... 128 2e-29
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 77 6e-14
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 74 5e-13
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 74 5e-13
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 74 5e-13
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 72 2e-12
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 72 2e-12
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 72 3e-12
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 65 3e-10
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 64 5e-10
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 64 6e-10
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 63 8e-10
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 63 1e-09
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 62 1e-09
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 2e-09
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 3e-09
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 3e-09
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 3e-09
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 61 5e-09
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 4e-08
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 56 1e-07
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 56 1e-07
Medtr5g062110.1 | hypothetical protein | LC | chr5:25797247-2579... 56 2e-07
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 55 4e-07
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 54 7e-07
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 54 8e-07
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 53 1e-06
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 53 1e-06
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 53 1e-06
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 53 1e-06
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 53 1e-06
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 53 1e-06
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 53 1e-06
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 53 1e-06
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 53 1e-06
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 53 1e-06
>Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr2:578880-586948 | 20130731
Length = 1159
Score = 1144 bits (2958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/742 (74%), Positives = 607/742 (81%), Gaps = 24/742 (3%)
Query: 4 SAKPPQTNWSQHANAQHNFASQAKFLSSNFLFSLPTHKSPSYQEPPPGTGSQRFVLRQSQ 63
S + PQ NW +H N+ +NF+SQ +FL+SNFLF+LPT+K P + ++RQ Q
Sbjct: 10 SVQIPQHNWLKHVNSHNNFSSQPQFLTSNFLFTLPTNK------PIDRAATTTSIVRQGQ 63
Query: 64 ---GSERVQVDKAWLAITTPQNSTRNYVQPGETVKVTPQLHESMAATSFQGSHENNMPRH 120
S+R QVDKAW A++ Q S+R+YV G++VKVTPQ HE+ TSFQGS+ENN H
Sbjct: 64 NVQSSQRAQVDKAWSALSRLQLSSRSYVPIGKSVKVTPQFHENRTTTSFQGSYENNKLNH 123
Query: 121 SDVTTTPIVINHRSQVLDSSVNNHTKYTDQINESTKCMPVHXXXXXXXXXXXXXX-QIVE 179
DV TP VINH S+V+DS VNNHTKYT Q NESTKC+ QIVE
Sbjct: 124 PDVAATPTVINHTSRVVDSLVNNHTKYTGQTNESTKCVADTINIDDDDILESMDLDQIVE 183
Query: 180 QYQSSCTPQPSMSRLPPITPTADKDNFAGH-DNLLPPELCVDCSHGCKLGHCPEAASHLQ 238
+YQS+CTPQP MS+ PP TPTADKDNFAG D LPPELC++C HG KLG CPEAASHLQ
Sbjct: 184 KYQSTCTPQPPMSKFPPFTPTADKDNFAGQGDTFLPPELCLNCIHGYKLGICPEAASHLQ 243
Query: 239 ELKDNLIVISNELLDNVENLSSTDISKLHQDRSQLKKQIQQLEKYIHSSNLAEERQKSHF 298
E KDNLI ISNEL+DNVENLSS I+KL QDRSQL QIQQLEKYIHSSNL EERQKS+F
Sbjct: 244 EFKDNLIAISNELIDNVENLSSVQIAKLRQDRSQLNNQIQQLEKYIHSSNLEEERQKSNF 303
Query: 299 SASTAPPTSFVYETPRQPFLSSGP------KTYDSQAYMGNGTYGXXXXXXXXXXXDRYG 352
S APPTSFVYETP++ +SSGP YD Q YM GTYG G
Sbjct: 304 VTSMAPPTSFVYETPQRNVISSGPVISSGLNRYDDQVYMDYGTYGTSYQSSC-------G 356
Query: 353 MPSGPVEREAFIPKNIEVNYIEGSGDKRWSSQDFPWTKDLEVNNKRVFGNHSFRPNQREV 412
MPSGPVERE FIPK IEVNYIEGSGDKRWSS+DF WTK+LEVNNK+VFGNHSFRPNQREV
Sbjct: 357 MPSGPVEREPFIPKIIEVNYIEGSGDKRWSSRDFSWTKELEVNNKKVFGNHSFRPNQREV 416
Query: 413 INATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPAV 472
INATMSGCDVFVLMPTGGGKSLTYQLPALI PGITLVISPLVSLIQDQIMHLLQANIPA
Sbjct: 417 INATMSGCDVFVLMPTGGGKSLTYQLPALINPGITLVISPLVSLIQDQIMHLLQANIPAA 476
Query: 473 CLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLENLHVRELLSRIVID 532
LSAN+EW+EQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLE+LH RELLSRIVID
Sbjct: 477 YLSANLEWAEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLESLHGRELLSRIVID 536
Query: 533 EAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQ 592
EAHCVSQWGHDFRPDYQGLG+LKQKFPNTPV SVKEDVVQALGL+NC++FRQ
Sbjct: 537 EAHCVSQWGHDFRPDYQGLGVLKQKFPNTPVLALTATATASVKEDVVQALGLVNCVVFRQ 596
Query: 593 SFNRPNLWYSVVPKTKKCVEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKCT 652
SFNRPNLWYSVVPKTKKC+EDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKC
Sbjct: 597 SFNRPNLWYSVVPKTKKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKCA 656
Query: 653 YYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQEC 712
+YHG+MDP QRA VQ+QWSKDE+NIICATVAFGMGINKPDVRFVIHHSLPKS+EGYHQEC
Sbjct: 657 FYHGSMDPDQRAHVQRQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSVEGYHQEC 716
Query: 713 GRAGRDGQRSSCVLYYNYGDYV 734
GRAGRDGQRSSCVLYY+Y DY+
Sbjct: 717 GRAGRDGQRSSCVLYYSYSDYI 738
>Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37328725-37334465 | 20130731
Length = 603
Score = 348 bits (894), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 169/354 (47%), Positives = 235/354 (66%), Gaps = 2/354 (0%)
Query: 382 SSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL 441
S ++ D+E+ N +FGN S RP Q + A ++ D F+LMPTGGGKSL YQLPA
Sbjct: 179 SYEELKTLDDIELANVVIFGNKSLRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLPAT 238
Query: 442 ICPGITLVISPLVSLIQDQIMHL-LQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLL 500
+ PG+T+V+SPL+SLIQDQI+ L L+ IPA L++ S+ +L+EL D KLL
Sbjct: 239 LQPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQNASQAAAVLQELRKDKPSCKLL 298
Query: 501 YVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPN 560
YVTPE++A + + L+ +H + L+ V+DEAHCVSQWGHDFRPDY+GLG LKQ FP
Sbjct: 299 YVTPERIAGNQSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGSLKQNFPR 358
Query: 561 TPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRE 620
PV V+ED++ AL + + I+ +SF+RPNL Y V+ KTK+ ++ + + + +
Sbjct: 359 VPVMALTATATHPVREDILNALRIPHAIVLERSFDRPNLKYEVIVKTKEPLKQLGQLLMD 418
Query: 621 NHFDECGIIYCLSRMDCEKVAEKLQE-CGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIIC 679
+CGI+YCLS+ +C V++ L E C K YYH + QR VQK+W EV+I+C
Sbjct: 419 RFKSQCGIVYCLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQRVAVQKKWHDGEVHIVC 478
Query: 680 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGDY 733
AT+AFGMGI+K DVRFVIH+++ KSIE Y+QE GRAGRD + C+ Y D+
Sbjct: 479 ATIAFGMGIDKADVRFVIHNTMSKSIESYYQESGRAGRDNLPAVCIALYQKKDF 532
>Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr5:10949368-10935495 | 20130731
Length = 685
Score = 328 bits (841), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/367 (47%), Positives = 225/367 (61%), Gaps = 40/367 (10%)
Query: 376 SGDKRWSSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLT 435
+G W SQ DL +N +FG S+R NQ+E+INA +SG DV V+M GGGKSL
Sbjct: 68 NGTFEWDSQ----ADDLRLN---IFGISSYRANQKEIINAILSGRDVLVIMAAGGGKSLC 120
Query: 436 YQLPALICPGITLVISPLVSLIQDQIMHLLQANIPAVCLSANIEWSEQ----QEILRELN 491
YQLPA++ G+ LV+SPL+SLIQDQ+M L IPA L++ + Q R
Sbjct: 121 YQLPAVLRNGVALVVSPLLSLIQDQVMGLTALGIPAYMLTSTTSKDNEKVYIQSFWRRAR 180
Query: 492 SDYCKYKLLYVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGL 551
D KLLYVTPEK+ + I EAHC SQWGHDFRPDY+ L
Sbjct: 181 GDL---KLLYVTPEKITKKQE------------------IYEAHCCSQWGHDFRPDYKNL 219
Query: 552 GILKQKFPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPNLWYSVVPKT---K 608
GILK +FPN P+ V+ D+V+ L + C+ F + NRPNL+Y V K+ K
Sbjct: 220 GILKTQFPNVPMVALTATATQRVQNDLVEMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSK 279
Query: 609 KCVEDIDKFIRE---NHFDECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAF 665
V++I +FI+E NH E GI+YC SR +CE+VA++L+E G +YH +MD R
Sbjct: 280 VVVDEIAEFIQESYPNH--ESGIVYCFSRKECEQVAKELRERGISAGHYHADMDVNDREK 337
Query: 666 VQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCV 725
V +WS +++ +I TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAGRDG S C+
Sbjct: 338 VHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECL 397
Query: 726 LYYNYGD 732
LY+ GD
Sbjct: 398 LYFRPGD 404
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 202/338 (59%), Gaps = 10/338 (2%)
Query: 400 FGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 459
FG FR Q E I A +SG D F LMPTGGGKS+ YQ+PAL GI LV+ PL++L+++
Sbjct: 38 FGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCPLIALMEN 97
Query: 460 QIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLEN 519
Q+M L + I A LS+ + +I +L S +LLYVTPE +A + + +L
Sbjct: 98 QVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIA-TPGFMSKLTK 156
Query: 520 LHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKEDVV 579
+H R LLS I IDEAHC+S WGHDFRP Y+ L L+ P+ P+ V++DVV
Sbjct: 157 IHSRGLLSLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVV 216
Query: 580 QALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDI-----DKFIRENHFDECGIIYCLSR 634
++L + N +I + SFNRPN++Y V + K ++D D+ ++ D C IIYCL R
Sbjct: 217 ESLHMQNALILKTSFNRPNIYYEV--RYKDLLDDSYSDLSDRL--KSMGDVCAIIYCLER 272
Query: 635 MDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVR 694
C+ ++ L + G C YH ++ R V W + ++ ATVAFGMGI++ DVR
Sbjct: 273 SMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMGIDRKDVR 332
Query: 695 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
V H ++PKS+E ++QE GRAGRD S+ +LYY D
Sbjct: 333 IVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDD 370
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 202/338 (59%), Gaps = 10/338 (2%)
Query: 400 FGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQD 459
FG FR Q E I A +SG D F LMPTGGGKS+ YQ+PAL GI LV+ PL++L+++
Sbjct: 38 FGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCPLIALMEN 97
Query: 460 QIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLEN 519
Q+M L + I A LS+ + +I +L S +LLYVTPE +A + + +L
Sbjct: 98 QVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIA-TPGFMSKLTK 156
Query: 520 LHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKEDVV 579
+H R LLS I IDEAHC+S WGHDFRP Y+ L L+ P+ P+ V++DVV
Sbjct: 157 IHSRGLLSLIAIDEAHCISSWGHDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVV 216
Query: 580 QALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDI-----DKFIRENHFDECGIIYCLSR 634
++L + N +I + SFNRPN++Y V + K ++D D+ ++ D C IIYCL R
Sbjct: 217 ESLHMQNALILKTSFNRPNIYYEV--RYKDLLDDSYSDLSDRL--KSMGDVCAIIYCLER 272
Query: 635 MDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVR 694
C+ ++ L + G C YH ++ R V W + ++ ATVAFGMGI++ DVR
Sbjct: 273 SMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGMGIDRKDVR 332
Query: 695 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
V H ++PKS+E ++QE GRAGRD S+ +LYY D
Sbjct: 333 IVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDD 370
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 196/340 (57%), Gaps = 11/340 (3%)
Query: 397 KRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 456
K FG SFRP QREVI + D V+M TG GKSL YQ+P L+ +V+SPL+SL
Sbjct: 9 KDYFGFLSFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVKKTGIVVSPLISL 68
Query: 457 IQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQ 516
+QDQ+M L Q I A LS S Q++ + ++ ++ +L++TPEK +
Sbjct: 69 MQDQVMALKQRGIKAEYLS-----SAQKDYTVQSKAERGQFDILFMTPEKAC--TIPTSF 121
Query: 517 LENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKE 576
NL ++E +S +DEAHC+S+WGHDFR +Y+ L L+ + P V+
Sbjct: 122 WSNL-LKEGISLFAVDEAHCISEWGHDFRVEYKQLDKLRGVLLDVPYVGLTATATEKVRF 180
Query: 577 DVVQALGLINCIIFRQSFNRPNLWYSV--VPKTKKCVEDIDKFIRENHFDECG-IIYCLS 633
D+ +L + N + SF+RPNL+Y V + + ++++ + + + + C IIYC +
Sbjct: 181 DITNSLKMNNPYVVVGSFDRPNLFYGVKQFNRGQSFIDELVEEVSKEVANGCSTIIYCTT 240
Query: 634 RMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDV 693
D E++ + L E G YHG MD R + + +DE+ I+ AT+AFGMGI+KP++
Sbjct: 241 IKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLFVRDEMQIMVATIAFGMGIDKPNI 300
Query: 694 RFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGDY 733
R VIH+ PK++E Y+QE GR GRDG S C LYY D+
Sbjct: 301 RKVIHYGCPKNLESYYQESGRCGRDGIASVCWLYYTRSDF 340
>Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC |
chr8:34428957-34437037 | 20130731
Length = 917
Score = 206 bits (523), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 186/337 (55%), Gaps = 12/337 (3%)
Query: 397 KRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSL 456
K + G SFR Q E I ++G +++PTG GKSL YQL ALI PGITLV+SPLV+L
Sbjct: 269 KLIHGFDSFREGQLEAIKNVLAGKSTMLILPTGAGKSLCYQLSALILPGITLVVSPLVAL 328
Query: 457 IQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQ 516
+ DQ+ L I LS+ + E E L +L K+L+V+PE+ + L
Sbjct: 329 MIDQLRQL-PPLISGALLSSAQTFEESSETLNQLRQG--TIKVLFVSPERFLNEEFLSVI 385
Query: 517 LENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGL--GILKQKFPNTPVXXXXXXXXXSV 574
L V S +VIDEAHC+S+W H+FRP + L +L + + +
Sbjct: 386 SGGLAV----SLVVIDEAHCISEWSHNFRPSFMRLRASLLHKSLNVGSILAMTATATTTT 441
Query: 575 KEDVVQALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRENHFDECG--IIYCL 632
+ ++ AL + + + + R NL SV K ++D+ ++ + F E I+YC
Sbjct: 442 LDAIMSALDIPRTNLIQNAHLRDNLCLSV-SLIKNRMKDLLVLMKSSPFAEVKSIIVYCK 500
Query: 633 SRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPD 692
+ + ++++ L + K YH + +R +VQ+ + +++ ++ ATVAFGMG++K D
Sbjct: 501 FQSETDQISRYLNDNNIKAKSYHSGISAKERGYVQELFGSNKIRVVVATVAFGMGLDKRD 560
Query: 693 VRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYN 729
V VIH+SLP S+E Y QE GRAGRDG+ S C L+Y+
Sbjct: 561 VGAVIHYSLPGSLEEYVQEIGRAGRDGRLSYCHLFYD 597
>Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050056-37045638 | 20130731
Length = 614
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 388 WTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGIT 447
W + + ++ FG S + Q+E ++A + D VL TG GKSL +Q+PAL+ +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 448 LVISPLVSLIQDQIMHLLQANIPAVCL-SANIEWSEQQEILRELNSDYCKYKLLYVTPEK 506
+VISPL+SL+ DQ + L + I A L S + + +++ +R + Y ++Y+ PE
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGM------YSIVYICPET 261
Query: 507 VARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP------- 559
V R L++ L+ L ++ IDE HCVS+WGHDFRP Y L +L++ F
Sbjct: 262 VLR---LIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSL 318
Query: 560 --NTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSV 603
+ P+ V+ED++++L L + + SF RPNL + V
Sbjct: 319 KFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMV 365
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 65/104 (62%)
Query: 628 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 687
IIY +R D ++A+ L + G K Y+ + K++ ++ + ++ AT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 688 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYG 731
I+K +VR +IH+ P+S+E Y+QE GRAGRDG+ + C +Y G
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCSKFYYTG 613
>Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043472 | 20130731
Length = 768
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 388 WTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGIT 447
W + + ++ FG S + Q+E ++A + D VL TG GKSL +Q+PAL+ +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 448 LVISPLVSLIQDQIMHLLQANIPAVCL-SANIEWSEQQEILRELNSDYCKYKLLYVTPEK 506
+VISPL+SL+ DQ + L + I A L S + + +++ +R + Y ++Y+ PE
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGM------YSIVYICPET 261
Query: 507 VARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP------- 559
V R L++ L+ L ++ IDE HCVS+WGHDFRP Y L +L++ F
Sbjct: 262 VLR---LIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSL 318
Query: 560 --NTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSV 603
+ P+ V+ED++++L L + + SF RPNL + V
Sbjct: 319 KFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMV 365
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 66/104 (63%)
Query: 628 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 687
IIY +R D ++A+ L + G K Y+ + K++ ++ + ++ AT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 688 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYG 731
I+K +VR +IH+ P+S+E Y+QE GRAGRDG+ + C+LY N
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLA 613
>Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050187-37043472 | 20130731
Length = 768
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 388 WTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGIT 447
W + + ++ FG S + Q+E ++A + D VL TG GKSL +Q+PAL+ +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 448 LVISPLVSLIQDQIMHLLQANIPAVCL-SANIEWSEQQEILRELNSDYCKYKLLYVTPEK 506
+VISPL+SL+ DQ + L + I A L S + + +++ +R + Y ++Y+ PE
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGM------YSIVYICPET 261
Query: 507 VARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP------- 559
V R L++ L+ L ++ IDE HCVS+WGHDFRP Y L +L++ F
Sbjct: 262 VLR---LIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSL 318
Query: 560 --NTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSV 603
+ P+ V+ED++++L L + + SF RPNL + V
Sbjct: 319 KFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMV 365
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 66/104 (63%)
Query: 628 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 687
IIY +R D ++A+ L + G K Y+ + K++ ++ + ++ AT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 688 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYG 731
I+K +VR +IH+ P+S+E Y+QE GRAGRDG+ + C+LY N
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLA 613
>Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043455 | 20130731
Length = 876
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 388 WTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGIT 447
W + + ++ FG S + Q+E ++A + D VL TG GKSL +Q+PAL+ +
Sbjct: 148 WQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSLCFQIPALLTGKVV 207
Query: 448 LVISPLVSLIQDQIMHLLQANIPAVCL-SANIEWSEQQEILRELNSDYCKYKLLYVTPEK 506
+VISPL+SL+ DQ + L + I A L S + + +++ +R + Y ++Y+ PE
Sbjct: 208 VVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGM------YSIVYICPET 261
Query: 507 VARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFP------- 559
V R L++ L+ L ++ IDE HCVS+WGHDFRP Y L +L++ F
Sbjct: 262 VLR---LIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRLSVLRENFTTGKLKSL 318
Query: 560 --NTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSV 603
+ P+ V+ED++++L L + + SF RPNL + V
Sbjct: 319 KFDIPMMALTATATKRVREDILKSLRLSKDTSVVLTSFFRPNLRFMV 365
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 66/104 (63%)
Query: 628 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 687
IIY +R D ++A+ L + G K Y+ + K++ ++ + ++ AT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 688 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYG 731
I+K +VR +IH+ P+S+E Y+QE GRAGRDG+ + C+LY N
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLA 613
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 148/346 (42%), Gaps = 43/346 (12%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALI--------CPG---ITLVISP--- 452
P Q + + G D+ + TG GK+L Y LPA++ PG I LV++P
Sbjct: 120 PIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRE 179
Query: 453 -LVSLIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSD 511
V + Q+ + I + C+ + Q +R+L +++ TP +
Sbjct: 180 LAVQIQQEATKFGASSRIKSTCIYGGVPKGPQ---VRDLQKGV---EIIIATPGR----- 228
Query: 512 VLLRQLENLHVR-ELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXX 570
L+ LE+ H ++ +V+DEA + G D Q I+ Q P+
Sbjct: 229 -LIDMLESNHTNLRRVTYLVLDEADRMLDMGFD----PQIRKIVSQIRPDRQTLYWSATW 283
Query: 571 XXSVKEDVVQALGLINCIIFRQSFNRPN----LWYSVVPKTKKCVEDIDKFIR--ENHFD 624
V++ Q L +I + N + +VP+ +K DK ++ E+ D
Sbjct: 284 PKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKY----DKLVKLLEDIMD 339
Query: 625 ECGI-IYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVA 683
I I+ ++ C+++ +L+ G HG+ A+R +V ++ + I+ AT
Sbjct: 340 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDV 399
Query: 684 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYN 729
G++ DV++VI++ P S+E Y GR GR G + + ++
Sbjct: 400 AARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 445
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 154/350 (44%), Gaps = 44/350 (12%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALIC-----------PGITLVISP--- 452
P Q + + G D+ + TG GK+L Y +PA I P + LV++P
Sbjct: 520 PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTV-LVLAPTRE 578
Query: 453 LVSLIQDQIMHLLQAN-IPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSD 511
L + IQ+++ +++ + CL + Q L+EL+ ++ TP ++ +D
Sbjct: 579 LATQIQEEVFKFARSSRVSCTCLYGGAPKALQ---LKELDRGA---DIVVATPGRL--ND 630
Query: 512 VLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXX 571
+L +++ + ++ S +V+DEA + G F P + I+ + P
Sbjct: 631 IL--EMKKIDFGQV-SLLVLDEADRMLDMG--FEPQIRK--IVNEIPPRRQTLMYTATWP 683
Query: 572 XSVKE-------DVVQA-LGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRENHF 623
V++ + VQ +G ++ + +S + + VVP+ +K +++ +R
Sbjct: 684 KEVRKIAGDLLVNPVQVNIGNVDELAANKSITQ---YVEVVPQMEKQ-RRLEQILRSQER 739
Query: 624 DECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVA 683
II+C ++ C+++A + HG+ +R +V Q+ + I+ AT
Sbjct: 740 GSKIIIFCSTKKLCDQLARSIGRT-FGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDV 798
Query: 684 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGDY 733
G++ D+R VI++ P +E Y GR GR G +++ D+
Sbjct: 799 AARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFSEQDW 848
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 154/350 (44%), Gaps = 44/350 (12%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALIC-----------PGITLVISP--- 452
P Q + + G D+ + TG GK+L Y +PA I P + LV++P
Sbjct: 520 PIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTV-LVLAPTRE 578
Query: 453 LVSLIQDQIMHLLQAN-IPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSD 511
L + IQ+++ +++ + CL + Q L+EL+ ++ TP ++ +D
Sbjct: 579 LATQIQEEVFKFARSSRVSCTCLYGGAPKALQ---LKELDRGA---DIVVATPGRL--ND 630
Query: 512 VLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXX 571
+L +++ + ++ S +V+DEA + G F P + I+ + P
Sbjct: 631 IL--EMKKIDFGQV-SLLVLDEADRMLDMG--FEPQIRK--IVNEIPPRRQTLMYTATWP 683
Query: 572 XSVKE-------DVVQA-LGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKFIRENHF 623
V++ + VQ +G ++ + +S + + VVP+ +K +++ +R
Sbjct: 684 KEVRKIAGDLLVNPVQVNIGNVDELAANKSITQ---YVEVVPQMEKQ-RRLEQILRSQER 739
Query: 624 DECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVA 683
II+C ++ C+++A + HG+ +R +V Q+ + I+ AT
Sbjct: 740 GSKIIIFCSTKKLCDQLARSIGRT-FGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDV 798
Query: 684 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGDY 733
G++ D+R VI++ P +E Y GR GR G +++ D+
Sbjct: 799 AARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFSEQDW 848
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 147/344 (42%), Gaps = 39/344 (11%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPG-----------ITLVISPLVS 455
P Q + ++G D+ + TG GK+L+Y LPA++ + LV++P
Sbjct: 226 PIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRE 285
Query: 456 L---IQDQIMHL-LQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSD 511
L IQ + M ++NI C+ Q LR +++ TP ++ D
Sbjct: 286 LAVQIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRDLR------MGVEIVIATPGRLI--D 337
Query: 512 VLLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXX 571
+L Q NL + ++ +V+DEA + G F P + I+ Q P+
Sbjct: 338 MLEAQHTNL---QRVTYLVLDEADRMLDMG--FEPQIRK--IVNQIRPDRQTLYWSATWP 390
Query: 572 XSVKEDVVQALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKF------IRENHFDE 625
V+ Q L ++ + + N + + + V D++K+ ++E
Sbjct: 391 KEVESLARQFLHNPYKVVIGSPYLKAN---QSINQVVEVVTDMEKYNRLIKLLKEVMDGS 447
Query: 626 CGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFG 685
+I+ ++ C++V +L+ G HG+ + A+R +V ++ I+ AT
Sbjct: 448 RILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAA 507
Query: 686 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYN 729
G++ D++ V+++ P S+E Y GR GR G + + ++
Sbjct: 508 RGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFT 551
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 154/371 (41%), Gaps = 41/371 (11%)
Query: 381 WSSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPA 440
++S FP EV N G + P Q + + D+ + TG GK+L Y LPA
Sbjct: 166 FASSGFPSEILREVQNA---GFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPA 222
Query: 441 LI-----------CPGITLVISP---LVSLIQDQIMHLLQ-ANIPAVCLSANIEWSEQQE 485
I P + LV+SP L + IQD+ + + + I CL Q
Sbjct: 223 FIHLKRTNNNAKMGPTV-LVLSPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQ-- 279
Query: 486 ILRELNSDYCKYKLLYVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHD-- 543
L++++ ++ TP ++ +D+L + +LH +S +V+DEA + G +
Sbjct: 280 -LKDIDR---GADIVVATPGRL--NDILEMRRISLH---QVSYLVLDEADRMLDMGFEPQ 330
Query: 544 FRPDYQGLGILKQK--FPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPNLWY 601
R G+ +Q F T + V +G ++ ++ +S +
Sbjct: 331 IRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQHIEVL 390
Query: 602 SVVPKTKKCVEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPA 661
+ V K ++ ++ +R II+C ++ C+++A L HG+ A
Sbjct: 391 TYVEKQRR----LETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQA 445
Query: 662 QRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR 721
R V Q+ ++ AT G++ D+R V++ P +E Y GR GR G
Sbjct: 446 DRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAG-- 503
Query: 722 SSCVLYYNYGD 732
++ + Y +GD
Sbjct: 504 ATGIAYTFFGD 514
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 154/371 (41%), Gaps = 41/371 (11%)
Query: 381 WSSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPA 440
++S FP EV N G + P Q + + D+ + TG GK+L Y LPA
Sbjct: 166 FASSGFPSEILREVQNA---GFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPA 222
Query: 441 LI-----------CPGITLVISP---LVSLIQDQIMHLLQ-ANIPAVCLSANIEWSEQQE 485
I P + LV+SP L + IQD+ + + + I CL Q
Sbjct: 223 FIHLKRTNNNAKMGPTV-LVLSPTRELATQIQDEAVKFSKTSRIACTCLYGGAPKGPQ-- 279
Query: 486 ILRELNSDYCKYKLLYVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGHD-- 543
L++++ ++ TP ++ +D+L + +LH +S +V+DEA + G +
Sbjct: 280 -LKDIDR---GADIVVATPGRL--NDILEMRRISLH---QVSYLVLDEADRMLDMGFEPQ 330
Query: 544 FRPDYQGLGILKQK--FPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPNLWY 601
R G+ +Q F T + V +G ++ ++ +S +
Sbjct: 331 IRKIVNGVPARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQHIEVL 390
Query: 602 SVVPKTKKCVEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPA 661
+ V K ++ ++ +R II+C ++ C+++A L HG+ A
Sbjct: 391 TYVEKQRR----LETILRSQDQGSKIIIFCSTKKMCDQLARNLTRQ-FGAAAIHGDKSQA 445
Query: 662 QRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR 721
R V Q+ ++ AT G++ D+R V++ P +E Y GR GR G
Sbjct: 446 DRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAG-- 503
Query: 722 SSCVLYYNYGD 732
++ + Y +GD
Sbjct: 504 ATGIAYTFFGD 514
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 139/350 (39%), Gaps = 49/350 (14%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQ 466
P Q + I A + G ++ VL TG GKS ++ +P +IS S ++M++
Sbjct: 164 PVQMQAIPAALVGKNMLVLADTGSGKSASFLIP---------IISRCAS---HRLMYVSD 211
Query: 467 ANIP-AVCLSANIEWSEQQEILRELNSDYCKYKL-LYVTPEKVARSDVLLRQLENLHVR- 523
P A+ L+ E S Q E +L +K L V + +AR ++Q L V
Sbjct: 212 NKKPLAMVLTPTRELSIQVEEHAKLLGKGLPFKTALVVGGDAMARQLYRIQQGVELIVGT 271
Query: 524 -----ELLSR----------IVIDEAHCVSQWGHDFRPD-YQGLGILKQKFPNTPVXXXX 567
+LL++ V+DE C+ Q G FR Q L Q P
Sbjct: 272 PGRLVDLLTKNEIDLDDVTTFVVDEVDCMLQRG--FRDQVLQIFTALSQ-----PQVLMY 324
Query: 568 XXXXXSVKEDVVQALGLINCIIFRQSFNRPN-------LWYSVVPKTKKCVEDIDKFIRE 620
E + ++ +I NRPN +W K +K D +
Sbjct: 325 SATTSDSLEKMANSMAKDTVVITVGEPNRPNKAVKQLAIWVESKQKKQKL---FDILKSQ 381
Query: 621 NHFDECGIIYCLSRMDCEKVAEKLQ-ECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIIC 679
HF +IY SR+ + +A + G K HG +R + + + E ++
Sbjct: 382 KHFKPPVVIYVGSRLGADLLANAITVSTGVKAVSIHGEKSMTERREIMQSFMVGEFPVVV 441
Query: 680 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYN 729
AT G G++ VR VI +P SI Y + GRA R G+ +++ N
Sbjct: 442 ATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRASRMGEEGQAIVFVN 491
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 624 DECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVA 683
D+ I++ ++ + +A+ L + G++ T HG QR + + N++ AT
Sbjct: 549 DKTAIVFVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDV 608
Query: 684 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
G GI+ PDV VI++ +P +IE Y GR GR G+ + D
Sbjct: 609 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQD 657
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 138/352 (39%), Gaps = 56/352 (15%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALIC------------PGITLVISPLV 454
P QR V+ M G D+ TG GK+L + +P + + LV++P
Sbjct: 105 PIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGKDPLALVLAPTR 164
Query: 455 SLIQDQIMHLLQA--NIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDV 512
L + +A N+ +C+ S+Q +R+L DY + TP ++ D+
Sbjct: 165 ELAKQVEKEFYEAAPNLDTICVYGGTPISQQ---MRQL--DYG-VDIAVGTPGRII--DL 216
Query: 513 LLRQLENLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXX 572
L R NL + +++DEA + Q G F+ D + + P
Sbjct: 217 LNRGALNLKEVQF---VILDEADQMLQVG--FQEDVEKI------LERLPAERQTLMFSA 265
Query: 573 SVKEDVVQALGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDIDKF-IRENHFDECGIIY- 630
++ + Q + R P V +K + I + I + + + GII
Sbjct: 266 TMPTWIKQ--------LTRNYLKNPLTIDLVGDSDQKLADGISLYSILSDAYVKAGIIVP 317
Query: 631 ----------CLSRMDCEKVAEKLQECGHK---CTYYHGNMDPAQRAFVQKQWSKDEVNI 677
C+ ++ A+++ K C HG++ QR + N+
Sbjct: 318 LIKEHAKGGKCIVFTQTKRDADRISHGMSKSIPCEALHGDISQIQRERTLAGFRNGHFNV 377
Query: 678 ICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYN 729
+ AT G++ P+V VIH+ LP + E + GR GR G++ + +L Y
Sbjct: 378 LVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYT 429
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 148/379 (39%), Gaps = 41/379 (10%)
Query: 377 GDKRWSSQDFPWTKDLEVNN---KRVF-------GNHSFRPNQREVINATMSGCDVFVLM 426
D R+ ++D TK E + KR G P Q E I ++G D+
Sbjct: 127 ADTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARA 186
Query: 427 PTGGGKSLTYQLPAL--------ICPGITLVISPLVSLIQDQIMHLLQANIPAVCLSANI 478
G GK+ + +PAL I + LV + ++L Q+ L ++ +
Sbjct: 187 KNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTG 246
Query: 479 EWSEQQEILRELNSDYCKYKLLYVTPEKV---ARSDVLLRQLENLHVRELLSRIVIDEAH 535
S + +I+R Y LL TP ++ A+ V + + ++ V + +++ E
Sbjct: 247 GTSLKDDIMRL----YQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQ 302
Query: 536 CVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFN 595
+ F P + + + FP T K+ ++ +IN ++ +
Sbjct: 303 PSIEQLIQFLPPTRQILMFSATFPVT---------VKDFKDRYLRKPYIIN-LMDELTLK 352
Query: 596 RPNLWYSVVPKTKK--CVEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKCTY 653
+Y+ V + +K C+ + ++ N II+C S E +A+K+ E G+ C Y
Sbjct: 353 GITQFYAFVEERQKVHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGYSCFY 408
Query: 654 YHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 713
H M R V + + T F GI+ V VI+ PK+ E Y G
Sbjct: 409 IHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVG 468
Query: 714 RAGRDGQRSSCVLYYNYGD 732
R+GR G V Y D
Sbjct: 469 RSGRFGHLGLAVNLITYED 487
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 148/379 (39%), Gaps = 41/379 (10%)
Query: 377 GDKRWSSQDFPWTKDLEVNN---KRVF-------GNHSFRPNQREVINATMSGCDVFVLM 426
D R+ ++D TK E + KR G P Q E I ++G D+
Sbjct: 125 ADTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARA 184
Query: 427 PTGGGKSLTYQLPAL--------ICPGITLVISPLVSLIQDQIMHLLQANIPAVCLSANI 478
G GK+ + +PAL I + LV + ++L Q+ L ++ +
Sbjct: 185 KNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTG 244
Query: 479 EWSEQQEILRELNSDYCKYKLLYVTPEKV---ARSDVLLRQLENLHVRELLSRIVIDEAH 535
S + +I+R Y LL TP ++ A+ V + + ++ V + +++ E
Sbjct: 245 GTSLKDDIMRL----YQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLLSPEFQ 300
Query: 536 CVSQWGHDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFN 595
+ F P + + + FP T K+ ++ +IN ++ +
Sbjct: 301 PSIEQLIQFLPPTRQILMFSATFPVT---------VKDFKDRYLRKPYIIN-LMDELTLK 350
Query: 596 RPNLWYSVVPKTKK--CVEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKCTY 653
+Y+ V + +K C+ + ++ N II+C S E +A+K+ E G+ C Y
Sbjct: 351 GITQFYAFVEERQKVHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGYSCFY 406
Query: 654 YHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 713
H M R V + + T F GI+ V VI+ PK+ E Y G
Sbjct: 407 IHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVG 466
Query: 714 RAGRDGQRSSCVLYYNYGD 732
R+GR G V Y D
Sbjct: 467 RSGRFGHLGLAVNLITYED 485
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 152/381 (39%), Gaps = 43/381 (11%)
Query: 376 SGDKRWSSQDFPWTKDLEVNN---KRVF-------GNHSFRPNQREVINATMSGCDVFVL 425
+ D R+ ++D TK E + KR G P Q E I ++G D+
Sbjct: 133 AADTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILAR 192
Query: 426 MPTGGGKSLTYQLPAL--------ICPGITLVISPLVSLIQDQIMHLLQANIPAVCLSAN 477
G GK+ + +PAL + + LV + ++L Q+ L ++ +
Sbjct: 193 AKNGTGKTAAFSIPALEKIDQDKNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTT 252
Query: 478 IEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCV 537
S + +I+R Y LL TP ++ L + + V + S +V+DEA +
Sbjct: 253 GGTSLKDDIMRL----YQPVHLLVGTPGRI-----LDLAKKGVCVLKDCSMLVMDEADKL 303
Query: 538 SQWGHDFRPDYQGLGILKQKFP-NTPVXXXXXXXXXSVKEDVVQALG---LINCIIFRQS 593
+F+P + L Q P N + +VK+ + L +IN ++ +
Sbjct: 304 --LSPEFKPSIEQL---IQFLPSNRQILLFSATFPVTVKDFNDRYLRKPYIIN-LMDELT 357
Query: 594 FNRPNLWYSVVPKTKK--CVEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKC 651
+Y+ V + +K C+ + ++ N II+C S E +A+K+ E G+ C
Sbjct: 358 LKGITQFYAFVEERQKVHCLNTLFSKLQINQ----SIIFCNSVNRVELLAKKITELGYSC 413
Query: 652 TYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQE 711
Y H M R V + + T F GI+ V VI+ PK+ E Y
Sbjct: 414 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR 473
Query: 712 CGRAGRDGQRSSCVLYYNYGD 732
GR+GR G V Y D
Sbjct: 474 VGRSGRFGHLGLAVNLVTYED 494
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 153/382 (40%), Gaps = 57/382 (14%)
Query: 376 SGDKRWSSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLT 435
+GD+ +K++ VN G P QR V+ M G D+ TG GK+L
Sbjct: 84 NGDEGLEIAKLGISKEI-VNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 142
Query: 436 YQLPAL-------ICPG-----ITLVISPLVSLIQDQIMHLLQA--NIPAVCLSANIEWS 481
+ +P L G + LV++P L + A N+ + L +
Sbjct: 143 FGIPILDKIIKFNAKNGKRRDPLALVLAPTRELARQVEKEFKDAAPNLEIISLYGGMPIQ 202
Query: 482 EQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWG 541
+Q + +L S ++ TP +V D+L R +L ++++ + +V+DEA + Q G
Sbjct: 203 QQ---ISKLGSGV---DIVVGTPGRVI--DLLKRG--SLKLKDV-NYVVLDEADQMLQVG 251
Query: 542 HDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPNLWY 601
+ + + QK P+ S +++ R N+P
Sbjct: 252 FQ-----EAVETILQKLPSKRQTLMFSATMPSWIKNLT-----------RNYLNKPLTID 295
Query: 602 SVVPKTKKCVEDIDKF-IRENHFDECGIIY-----------CLSRMDCEKVAEKLQEC-- 647
V +K + I + I N + + GI+ C+ ++ A++L
Sbjct: 296 LVGDSDQKLADGISLYSIASNAYSKAGILVPLITEHAKGGKCIVFTQTKRDADRLSHIMA 355
Query: 648 -GHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIE 706
KC HG++ QR + N++ AT G++ P+V VIH+ LP + E
Sbjct: 356 KSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSE 415
Query: 707 GYHQECGRAGRDGQRSSCVLYY 728
+ GR GR G++ + +L +
Sbjct: 416 IFVHRSGRTGRAGKKGTAILVH 437
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 153/382 (40%), Gaps = 57/382 (14%)
Query: 376 SGDKRWSSQDFPWTKDLEVNNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLT 435
+GD+ +K++ VN G P QR V+ M G D+ TG GK+L
Sbjct: 84 NGDEGLEIAKLGISKEI-VNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLA 142
Query: 436 YQLPAL-------ICPG-----ITLVISPLVSLIQDQIMHLLQA--NIPAVCLSANIEWS 481
+ +P L G + LV++P L + A N+ + L +
Sbjct: 143 FGIPILDKIIKFNAKNGKRRDPLALVLAPTRELARQVEKEFKDAAPNLEIISLYGGMPIQ 202
Query: 482 EQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWG 541
+Q + +L S ++ TP +V D+L R +L ++++ + +V+DEA + Q G
Sbjct: 203 QQ---ISKLGSGV---DIVVGTPGRVI--DLLKRG--SLKLKDV-NYVVLDEADQMLQVG 251
Query: 542 HDFRPDYQGLGILKQKFPNTPVXXXXXXXXXSVKEDVVQALGLINCIIFRQSFNRPNLWY 601
+ + + QK P+ S +++ R N+P
Sbjct: 252 FQ-----EAVETILQKLPSKRQTLMFSATMPSWIKNLT-----------RNYLNKPLTID 295
Query: 602 SVVPKTKKCVEDIDKF-IRENHFDECGIIY-----------CLSRMDCEKVAEKLQEC-- 647
V +K + I + I N + + GI+ C+ ++ A++L
Sbjct: 296 LVGDSDQKLADGISLYSIASNAYSKAGILVPLITEHAKGGKCIVFTQTKRDADRLSHIMA 355
Query: 648 -GHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIE 706
KC HG++ QR + N++ AT G++ P+V VIH+ LP + E
Sbjct: 356 KSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSE 415
Query: 707 GYHQECGRAGRDGQRSSCVLYY 728
+ GR GR G++ + +L +
Sbjct: 416 IFVHRSGRTGRAGKKGTAILVH 437
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 624 DECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVA 683
D+ I++ ++ + +A+ L+ G++ T HG QR + + N++ AT
Sbjct: 511 DKTAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDV 568
Query: 684 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
G GI+ PDV VI++ +P +IE Y GR GR G+ + D
Sbjct: 569 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQD 617
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 624 DECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVA 683
D+ I++ ++ + +A+ L+ G++ T HG QR + + N++ AT
Sbjct: 511 DKTAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDV 568
Query: 684 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
G GI+ PDV VI++ +P +IE Y GR GR G+ + D
Sbjct: 569 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQD 617
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 624 DECGIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVA 683
D+ I++ ++ + +A+ L+ G++ T HG QR + + N++ AT
Sbjct: 511 DKTAIVFVNTKKSADFLAKNLE--GYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDV 568
Query: 684 FGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
G GI+ PDV VI++ +P +IE Y GR GR G+ + D
Sbjct: 569 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQD 617
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 142/362 (39%), Gaps = 69/362 (19%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL-----------ICPG---ITLVISP 452
P Q + + +SG D+ + TG GK+L + LP + I PG L+I P
Sbjct: 169 PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICP 228
Query: 453 LVSL-------IQDQIMHLLQANIPAV----CLSANIEWSEQQEILRELNSDYCKYKLLY 501
L I++ ++ L +A P + C+ I+ Q EI+++ ++
Sbjct: 229 SRELARQTYEVIEEFLLPLKEAGYPELRPLLCI-GGIDMRSQLEIVKK------GVHIVV 281
Query: 502 VTPEKVARSDVLLRQLENLHVRELLSRIVIDEAHCVSQWGH--DFRPDYQGLGILKQKF- 558
TP ++ D+L ++ NL L+ +DEA + G D R + +Q
Sbjct: 282 ATPGRL--KDMLAKKKMNLDNCRYLT---LDEADRLVDLGFEDDIREVFDHFKAQRQTLL 336
Query: 559 --PNTPVXXXXXXXXXSVKEDVVQA--LGLINCIIFRQSFNRPNLWYSVVPKTKKCVEDI 614
P VK +V G N + ++ VE +
Sbjct: 337 FSATMPTKIQNFARSALVKPIIVNVGRAGAANLDVIQE------------------VEYV 378
Query: 615 DKFIRENHFDEC-------GIIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQ 667
+ + + EC +I+C ++ D + + E L G + HG D +R +
Sbjct: 379 KQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAI 438
Query: 668 KQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLY 727
+ + +++ AT G++ PD++ VI++ +P IE Y GR GR G+ +
Sbjct: 439 SSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 498
Query: 728 YN 729
N
Sbjct: 499 IN 500
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 628 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 687
+I+C ++ D + + E L G + HG+ D R + + + +++ AT G
Sbjct: 401 LIFCENKADVDNIHEYLLLKGVEAVAIHGDKDQEDREYAISSFKTGKKDVLVATDIASKG 460
Query: 688 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYN 729
++ PD++ VI++ +P IE Y GR GR G+ + N
Sbjct: 461 LDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFIN 502
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 604 VPKTKKCVEDIDKFIRE-NHFDECG------IIYCLSRMDCEKVAEKLQECGHKCTYYHG 656
V + +K +D + E + ++CG I++ + C++VAE L G HG
Sbjct: 342 VSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHG 401
Query: 657 NMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAG 716
++R + +I+ AT G++ V VI+ LPK+ E Y GR G
Sbjct: 402 GRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTG 461
Query: 717 RDGQRSSCVLYYNYGD 732
R G +Y D
Sbjct: 462 RAGSTGIATSFYTDRD 477
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 604 VPKTKKCVEDIDKFIRE-NHFDECG------IIYCLSRMDCEKVAEKLQECGHKCTYYHG 656
V + +K +D + E + ++CG I++ + C++VAE L G HG
Sbjct: 311 VSENEKIDRLLDLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHG 370
Query: 657 NMDPAQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAG 716
++R + +I+ AT G++ V VI+ LPK+ E Y GR G
Sbjct: 371 GRSQSEREAALHDFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTG 430
Query: 717 RDGQRSSCVLYYNYGD 732
R G +Y D
Sbjct: 431 RAGSTGIATSFYTDRD 446
>Medtr5g062110.1 | hypothetical protein | LC |
chr5:25797247-25799563 | 20130731
Length = 304
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 13/70 (18%)
Query: 81 QNSTRNYVQPGETVKVTPQLHESMAATSFQGSHENNMPRHSDVTTTPIVINHRSQVLDSS 140
Q S+R+YVQ G++VKVTP+ HE+ TSFQGS+ N+ +R +DS
Sbjct: 131 QLSSRSYVQRGKSVKVTPRFHENRTTTSFQGSYANDKL-------------NRPDCVDSL 177
Query: 141 VNNHTKYTDQ 150
VNNH KY Q
Sbjct: 178 VNNHKKYMSQ 187
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%)
Query: 628 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 687
+I+ +R + + +K++ H + HG+MD R + +++ ++ T G
Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
Query: 688 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
I+ V VI++ LP E Y GR+GR G++ + + D
Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDD 387
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%)
Query: 628 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 687
+I+ +R + + +K++ H + HG+MD R + +++ ++ T G
Sbjct: 283 VIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
Query: 688 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
I+ V VI++ LP E Y GR+GR G++ + + D
Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLED 387
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%)
Query: 628 IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKDEVNIICATVAFGMG 687
+I+ +R + + +K++ H + HG+MD R + +++ ++ T G
Sbjct: 267 VIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 326
Query: 688 INKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
I+ V VI++ LP E Y GR+GR G++ + + D
Sbjct: 327 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLED 371
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL----------ICPG-ITLVISPLVS 455
P Q + + MSG D + TG GK+L + LP L + G I L+++P
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRE 587
Query: 456 LIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLR 515
L+Q QI ++ + + + + ++++ +++ TP ++ D+L
Sbjct: 588 LVQ-QIHSDIRKFTKVMGIRC-VPVYGGSGVAQQISELKRGTEIVVCTPGRMI--DILCT 643
Query: 516 QLENLHVRELLSRIVIDEAHCVSQWG---------HDFRPDYQGL----------GILKQ 556
+ ++ +V+DEA + G + RPD Q + IL +
Sbjct: 644 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 703
Query: 557 KFPNTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSVVPKTKKCVEDID 615
K N PV V +D+ Q + + F + WY
Sbjct: 704 KVLNKPVEIQVGGRSV-VNKDIAQLVEVRPENERFLRLLELLGEWY-------------- 748
Query: 616 KFIRENHFDECG--IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKD 673
E G +++ S+ C+ + + L + G+ C HG D R + +
Sbjct: 749 ---------EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSN 799
Query: 674 EVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
N++ AT G++ ++ VI+ +P E Y GR GR G++ + + + D
Sbjct: 800 VCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL----------ICPG-ITLVISPLVS 455
P Q + + MSG D + TG GK+L + LP L + G I L+++P
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRE 587
Query: 456 LIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLR 515
L+Q QI ++ + + + + ++++ +++ TP ++ D+L
Sbjct: 588 LVQ-QIHSDIRKFTKVMGIRC-VPVYGGSGVAQQISELKRGTEIVVCTPGRMI--DILCT 643
Query: 516 QLENLHVRELLSRIVIDEAHCVSQWG---------HDFRPDYQGL----------GILKQ 556
+ ++ +V+DEA + G + RPD Q + IL +
Sbjct: 644 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 703
Query: 557 KFPNTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSVVPKTKKCVEDID 615
K N PV V +D+ Q + + F + WY
Sbjct: 704 KVLNKPVEIQVGGRSV-VNKDIAQLVEVRPENERFLRLLELLGEWY-------------- 748
Query: 616 KFIRENHFDECG--IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKD 673
E G +++ S+ C+ + + L + G+ C HG D R + +
Sbjct: 749 ---------EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSN 799
Query: 674 EVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
N++ AT G++ ++ VI+ +P E Y GR GR G++ + + + D
Sbjct: 800 VCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL----------ICPG-ITLVISPLVS 455
P Q + + MSG D + TG GK+L + LP L + G I L+++P
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRE 587
Query: 456 LIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLR 515
L+Q QI ++ + + + + ++++ +++ TP ++ D+L
Sbjct: 588 LVQ-QIHSDIRKFTKVMGIRC-VPVYGGSGVAQQISELKRGTEIVVCTPGRMI--DILCT 643
Query: 516 QLENLHVRELLSRIVIDEAHCVSQWG---------HDFRPDYQGL----------GILKQ 556
+ ++ +V+DEA + G + RPD Q + IL +
Sbjct: 644 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 703
Query: 557 KFPNTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSVVPKTKKCVEDID 615
K N PV V +D+ Q + + F + WY
Sbjct: 704 KVLNKPVEIQVGGRSV-VNKDIAQLVEVRPENERFLRLLELLGEWY-------------- 748
Query: 616 KFIRENHFDECG--IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKD 673
E G +++ S+ C+ + + L + G+ C HG D R + +
Sbjct: 749 ---------EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSN 799
Query: 674 EVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
N++ AT G++ ++ VI+ +P E Y GR GR G++ + + + D
Sbjct: 800 VCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL----------ICPG-ITLVISPLVS 455
P Q + + MSG D + TG GK+L + LP L + G I L+++P
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRE 587
Query: 456 LIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLR 515
L+Q QI ++ + + + + ++++ +++ TP ++ D+L
Sbjct: 588 LVQ-QIHSDIRKFTKVMGIRC-VPVYGGSGVAQQISELKRGTEIVVCTPGRMI--DILCT 643
Query: 516 QLENLHVRELLSRIVIDEAHCVSQWG---------HDFRPDYQGL----------GILKQ 556
+ ++ +V+DEA + G + RPD Q + IL +
Sbjct: 644 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 703
Query: 557 KFPNTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSVVPKTKKCVEDID 615
K N PV V +D+ Q + + F + WY
Sbjct: 704 KVLNKPVEIQVGGRSV-VNKDIAQLVEVRPENERFLRLLELLGEWY-------------- 748
Query: 616 KFIRENHFDECG--IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKD 673
E G +++ S+ C+ + + L + G+ C HG D R + +
Sbjct: 749 ---------EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSN 799
Query: 674 EVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
N++ AT G++ ++ VI+ +P E Y GR GR G++ + + + D
Sbjct: 800 VCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL----------ICPG-ITLVISPLVS 455
P Q + + MSG D + TG GK+L + LP L + G I L+++P
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRE 587
Query: 456 LIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLR 515
L+Q QI ++ + + + + ++++ +++ TP ++ D+L
Sbjct: 588 LVQ-QIHSDIRKFTKVMGIRC-VPVYGGSGVAQQISELKRGTEIVVCTPGRMI--DILCT 643
Query: 516 QLENLHVRELLSRIVIDEAHCVSQWG---------HDFRPDYQGL----------GILKQ 556
+ ++ +V+DEA + G + RPD Q + IL +
Sbjct: 644 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 703
Query: 557 KFPNTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSVVPKTKKCVEDID 615
K N PV V +D+ Q + + F + WY
Sbjct: 704 KVLNKPVEIQVGGRSV-VNKDIAQLVEVRPENERFLRLLELLGEWY-------------- 748
Query: 616 KFIRENHFDECG--IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKD 673
E G +++ S+ C+ + + L + G+ C HG D R + +
Sbjct: 749 ---------EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSN 799
Query: 674 EVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
N++ AT G++ ++ VI+ +P E Y GR GR G++ + + + D
Sbjct: 800 VCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL----------ICPG-ITLVISPLVS 455
P Q + + MSG D + TG GK+L + LP L + G I L+++P
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRE 587
Query: 456 LIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLR 515
L+Q QI ++ + + + + ++++ +++ TP ++ D+L
Sbjct: 588 LVQ-QIHSDIRKFTKVMGIRC-VPVYGGSGVAQQISELKRGTEIVVCTPGRMI--DILCT 643
Query: 516 QLENLHVRELLSRIVIDEAHCVSQWG---------HDFRPDYQGL----------GILKQ 556
+ ++ +V+DEA + G + RPD Q + IL +
Sbjct: 644 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 703
Query: 557 KFPNTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSVVPKTKKCVEDID 615
K N PV V +D+ Q + + F + WY
Sbjct: 704 KVLNKPVEIQVGGRSV-VNKDIAQLVEVRPENERFLRLLELLGEWY-------------- 748
Query: 616 KFIRENHFDECG--IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKD 673
E G +++ S+ C+ + + L + G+ C HG D R + +
Sbjct: 749 ---------EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSN 799
Query: 674 EVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
N++ AT G++ ++ VI+ +P E Y GR GR G++ + + + D
Sbjct: 800 VCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL----------ICPG-ITLVISPLVS 455
P Q + + MSG D + TG GK+L + LP L + G I L+++P
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRE 587
Query: 456 LIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLR 515
L+Q QI ++ + + + + ++++ +++ TP ++ D+L
Sbjct: 588 LVQ-QIHSDIRKFTKVMGIRC-VPVYGGSGVAQQISELKRGTEIVVCTPGRMI--DILCT 643
Query: 516 QLENLHVRELLSRIVIDEAHCVSQWG---------HDFRPDYQGL----------GILKQ 556
+ ++ +V+DEA + G + RPD Q + IL +
Sbjct: 644 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 703
Query: 557 KFPNTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSVVPKTKKCVEDID 615
K N PV V +D+ Q + + F + WY
Sbjct: 704 KVLNKPVEIQVGGRSV-VNKDIAQLVEVRPENERFLRLLELLGEWY-------------- 748
Query: 616 KFIRENHFDECG--IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKD 673
E G +++ S+ C+ + + L + G+ C HG D R + +
Sbjct: 749 ---------EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSN 799
Query: 674 EVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
N++ AT G++ ++ VI+ +P E Y GR GR G++ + + + D
Sbjct: 800 VCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL----------ICPG-ITLVISPLVS 455
P Q + + MSG D + TG GK+L + LP L + G I L+++P
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRE 587
Query: 456 LIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLR 515
L+Q QI ++ + + + + ++++ +++ TP ++ D+L
Sbjct: 588 LVQ-QIHSDIRKFTKVMGIRC-VPVYGGSGVAQQISELKRGTEIVVCTPGRMI--DILCT 643
Query: 516 QLENLHVRELLSRIVIDEAHCVSQWG---------HDFRPDYQGL----------GILKQ 556
+ ++ +V+DEA + G + RPD Q + IL +
Sbjct: 644 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 703
Query: 557 KFPNTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSVVPKTKKCVEDID 615
K N PV V +D+ Q + + F + WY
Sbjct: 704 KVLNKPVEIQVGGRSV-VNKDIAQLVEVRPENERFLRLLELLGEWY-------------- 748
Query: 616 KFIRENHFDECG--IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKD 673
E G +++ S+ C+ + + L + G+ C HG D R + +
Sbjct: 749 ---------EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSN 799
Query: 674 EVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
N++ AT G++ ++ VI+ +P E Y GR GR G++ + + + D
Sbjct: 800 VCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL----------ICPG-ITLVISPLVS 455
P Q + + MSG D + TG GK+L + LP L + G I L+++P
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRE 587
Query: 456 LIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLR 515
L+Q QI ++ + + + + ++++ +++ TP ++ D+L
Sbjct: 588 LVQ-QIHSDIRKFTKVMGIRC-VPVYGGSGVAQQISELKRGTEIVVCTPGRMI--DILCT 643
Query: 516 QLENLHVRELLSRIVIDEAHCVSQWG---------HDFRPDYQGL----------GILKQ 556
+ ++ +V+DEA + G + RPD Q + IL +
Sbjct: 644 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 703
Query: 557 KFPNTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSVVPKTKKCVEDID 615
K N PV V +D+ Q + + F + WY
Sbjct: 704 KVLNKPVEIQVGGRSV-VNKDIAQLVEVRPENERFLRLLELLGEWY-------------- 748
Query: 616 KFIRENHFDECG--IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKD 673
E G +++ S+ C+ + + L + G+ C HG D R + +
Sbjct: 749 ---------EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSN 799
Query: 674 EVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
N++ AT G++ ++ VI+ +P E Y GR GR G++ + + + D
Sbjct: 800 VCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 407 PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPAL----------ICPG-ITLVISPLVS 455
P Q + + MSG D + TG GK+L + LP L + G I L+++P
Sbjct: 528 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGPIGLIMAPTRE 587
Query: 456 LIQDQIMHLLQANIPAVCLSANIEWSEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLR 515
L+Q QI ++ + + + + ++++ +++ TP ++ D+L
Sbjct: 588 LVQ-QIHSDIRKFTKVMGIRC-VPVYGGSGVAQQISELKRGTEIVVCTPGRMI--DILCT 643
Query: 516 QLENLHVRELLSRIVIDEAHCVSQWG---------HDFRPDYQGL----------GILKQ 556
+ ++ +V+DEA + G + RPD Q + IL +
Sbjct: 644 SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 703
Query: 557 KFPNTPVXXXXXXXXXSVKEDVVQALGLI-NCIIFRQSFNRPNLWYSVVPKTKKCVEDID 615
K N PV V +D+ Q + + F + WY
Sbjct: 704 KVLNKPVEIQVGGRSV-VNKDIAQLVEVRPENERFLRLLELLGEWY-------------- 748
Query: 616 KFIRENHFDECG--IIYCLSRMDCEKVAEKLQECGHKCTYYHGNMDPAQRAFVQKQWSKD 673
E G +++ S+ C+ + + L + G+ C HG D R + +
Sbjct: 749 ---------EKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSN 799
Query: 674 EVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYGD 732
N++ AT G++ ++ VI+ +P E Y GR GR G++ + + + D
Sbjct: 800 VCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED 858