Miyakogusa Predicted Gene

Lj4g3v2692420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2692420.1 tr|G7INQ6|G7INQ6_MEDTR Thiamine-phosphate
pyrophosphorylase OS=Medicago truncatula GN=MTR_2g006350 P,85.9,0,no
description,NULL; no description,Aldolase-type TIM barrel;
TMP-TENI,Thiamine phosphate synthase; ,CUFF.51549.1
         (390 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g006350.1 | thiamine-phosphate pyrophosphorylase | HC | ch...   707   0.0  
Medtr2g006225.1 | thiamine biosynthetic enzyme, putative | LC | ...    71   1e-12

>Medtr2g006350.1 | thiamine-phosphate pyrophosphorylase | HC |
           chr2:551234-546678 | 20130731
          Length = 576

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/390 (86%), Positives = 368/390 (94%)

Query: 1   MISTSGDVLADPSVLTGFREQLLPMADIVTPNLKEASVLLGDVPLKSVSDMRAAAKLIHD 60
           MISTSGD+LA PSVL GFRE+LLPMADIVTPN+KEAS LLGD+P+K+VSDMR AAKLIHD
Sbjct: 187 MISTSGDILAGPSVLDGFREELLPMADIVTPNVKEASALLGDLPIKTVSDMRTAAKLIHD 246

Query: 61  LGPRNVLVKGGHLPNSFDAIDIFFDGFELYELCSPRISTRNTHGTGCTLASCIAAELAKG 120
           LGPR+VLVKGG LPNS +AIDIF+DG E YEL SPR++TRNTHGTGCT+ASCIAAELAKG
Sbjct: 247 LGPRSVLVKGGDLPNSSEAIDIFYDGQEFYELSSPRVNTRNTHGTGCTMASCIAAELAKG 306

Query: 121 SSMLSAVKIAKRFVESALNYSRDLVIGNGVQGPFDHFLALKNINQNSCRQDRFNPNNLLL 180
           SSMLSAVKIAKRFVE+AL YSRDL+IGNGVQGPFDH LALKNINQ+S RQDRFNPN+L L
Sbjct: 307 SSMLSAVKIAKRFVEAALEYSRDLLIGNGVQGPFDHLLALKNINQSSYRQDRFNPNDLFL 366

Query: 181 YAVTDSGMNRKWGRSIADAVKAAVEGGATIVQLREKDTETRDFIDAAKVCIEVCRSYGVP 240
           YAVTDSGMNRKWGRSIA+AVKAAVEGGATIVQLREKD ET+DF+DAAKVC+++CRSYGVP
Sbjct: 367 YAVTDSGMNRKWGRSIAEAVKAAVEGGATIVQLREKDAETKDFVDAAKVCLKICRSYGVP 426

Query: 241 LLINDRIDVALACDADGVHIGQSDMPARLVRTLLGPEKIIGVSCKTPEQAHQAWIDGADY 300
           LLINDRIDVALACDADGVH+GQSDMPARL RT+LGPEKIIGVSCKTPE AHQAW+DGADY
Sbjct: 427 LLINDRIDVALACDADGVHVGQSDMPARLARTILGPEKIIGVSCKTPEHAHQAWLDGADY 486

Query: 301 IGSGGVYPTNTKENNRTIGLDGLREVCQASKLPVVAIGGIGLSNARAVMEIGEPNLKGVA 360
           IGSGGVYPTNTKENNRTIGLDGL+EVC+ASKLPVVAIGGIG+SNARAVME+G P+LKGVA
Sbjct: 487 IGSGGVYPTNTKENNRTIGLDGLKEVCKASKLPVVAIGGIGMSNARAVMELGVPSLKGVA 546

Query: 361 VVSALFDRECISTETKNLHALISERVLLKQ 390
           VVSALFDRECI TET+NL A+ISE  LL Q
Sbjct: 547 VVSALFDRECILTETRNLQAVISEAALLTQ 576


>Medtr2g006225.1 | thiamine biosynthetic enzyme, putative | LC |
           chr2:508314-508574 | 20130731
          Length = 86

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/72 (54%), Positives = 47/72 (65%), Gaps = 1/72 (1%)

Query: 264 DMPARLVRTLLGPEKIIGVSCKTPEQAHQAWIDGADYIGSGGVYPTNTKENNRTIGLDGL 323
           D+PARLVRTLLGPEKIIG SCK P++ H           +  VY    +    T+GLDGL
Sbjct: 15  DIPARLVRTLLGPEKIIGASCKKPDK-HIKHGSMVLITSAVVVYIPLIQRQRITLGLDGL 73

Query: 324 REVCQASKLPVV 335
            EVC+ASKLPV+
Sbjct: 74  MEVCKASKLPVL 85