Miyakogusa Predicted Gene
- Lj4g3v2691870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2691870.1 Non Characterized Hit- tr|D8T2T4|D8T2T4_SELML
Putative uncharacterized protein OS=Selaginella
moelle,30.66,8e-19,coiled-coil,NULL; MYB_LIKE,Myb-like domain;
SANT,SANT domain; no description,Homeodomain-like; SANT
,NODE_2027_length_1049_cov_112.840797.path1.1
(262 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g114060.1 | Myb-like DNA-binding domain protein, putative ... 330 8e-91
Medtr7g109430.1 | DnaJ domain; Myb-like DNA-binding domain prote... 325 2e-89
Medtr3g113680.1 | DnaJ domain; Myb-like DNA-binding domain prote... 322 3e-88
Medtr8g093080.1 | duplicated homeodomain protein | HC | chr8:389... 91 9e-19
>Medtr3g114060.1 | Myb-like DNA-binding domain protein, putative |
HC | chr3:53251873-53250779 | 20130731
Length = 334
Score = 330 bits (846), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 175/265 (66%), Positives = 200/265 (75%), Gaps = 10/265 (3%)
Query: 1 MSLDIEHLRGLCEKMEDRKELEQAEVIRDALSCKEGMADVKYEKTIQQNGSIKANGSRGS 60
MS DIE LRGLCEKME ++ LEQAE +RDALSCK+ D EK+ QQNGS+K NGS S
Sbjct: 77 MSFDIEQLRGLCEKMEGKEVLEQAEALRDALSCKKDAVD---EKSNQQNGSVKVNGSSNS 133
Query: 61 -KSKTEKREKPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVDEIMKATKTVLL 119
S EK+EKPW+KEEIELLRKG++K+PKGTSRRWEV+SEYIGTGRSV+EIMKATKTVLL
Sbjct: 134 LASYVEKKEKPWTKEEIELLRKGIRKFPKGTSRRWEVVSEYIGTGRSVEEIMKATKTVLL 193
Query: 120 QKPDSSKAFDAFLEKRKPAV-SIASPLTTREEVEGAPTNPETGKPENSDASSKKDNLEDS 178
QKPD++KAFD FLEKRKPA +IASPLTTREE+EG T EN A + +
Sbjct: 194 QKPDTAKAFDTFLEKRKPAAQTIASPLTTREELEGVSVPAATTTTENGAAKTTTVPTPTT 253
Query: 179 QGKSTDDQNSTAVA-ANGVXXXXXDQDIWSAVQERALVQALKAFPKEASQRWERVAAAVP 237
+ NS + + GV +Q++WSAVQERALVQALK FPKEASQRWERVAAAV
Sbjct: 254 TTLTPITTNSISSEDSQGV----FEQEVWSAVQERALVQALKTFPKEASQRWERVAAAVT 309
Query: 238 GKTVNQCKKKFTAMKESFRNKKGAV 262
GK V QCKKKF MKESFRNKK AV
Sbjct: 310 GKIVGQCKKKFAMMKESFRNKKAAV 334
>Medtr7g109430.1 | DnaJ domain; Myb-like DNA-binding domain protein
| HC | chr7:44742394-44740433 | 20130731
Length = 653
Score = 325 bits (834), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/286 (62%), Positives = 203/286 (70%), Gaps = 48/286 (16%)
Query: 1 MSLDIEHLRGLCEKMEDRKELEQAEVIRDALSCKEGMADVKYEKTIQQNGSIKANGSRGS 60
MS DIE LRGLCEKME ++ LEQAE +RDALSCK+ + D EK+ QQNGS+K NGS S
Sbjct: 392 MSFDIEQLRGLCEKMEGKEVLEQAEALRDALSCKKDVVD---EKSNQQNGSVKVNGSSSS 448
Query: 61 KS-KTEKREKPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVDEIMKATKTVLL 119
+ EK+EKPW+KEEIELLRKG+QK+PKGTSRRWEV+SEYIGTGRSV+EIMKATKTVLL
Sbjct: 449 LAGYVEKKEKPWTKEEIELLRKGIQKFPKGTSRRWEVVSEYIGTGRSVEEIMKATKTVLL 508
Query: 120 QKPDSSKAFDAFLEKRKPAV-SIASPLTTREEVEGAPTNPETGKPENSDASSKKD----- 173
QKPD++KAFD FLEKRKPA SIASPL+TREE+EG T ENSDA +
Sbjct: 509 QKPDTAKAFDTFLEKRKPAAQSIASPLSTREELEGVSIPAATT--ENSDAKTTTTIPTPT 566
Query: 174 -----------------NLEDSQGKSTDDQNSTAVAANGVXXXXXDQDIWSAVQERALVQ 216
N EDSQG S +Q+ WSAVQERALVQ
Sbjct: 567 MTTTTIPTPVPTATSSINSEDSQGVS-------------------EQEAWSAVQERALVQ 607
Query: 217 ALKAFPKEASQRWERVAAAVPGKTVNQCKKKFTAMKESFRNKKGAV 262
ALK FPKEA+QRWERVAAAVPGKTV QCKKKF MKE+FRNKK AV
Sbjct: 608 ALKTFPKEANQRWERVAAAVPGKTVIQCKKKFAVMKENFRNKKTAV 653
>Medtr3g113680.1 | DnaJ domain; Myb-like DNA-binding domain protein
| HC | chr3:53238873-53236019 | 20130731
Length = 653
Score = 322 bits (824), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 178/286 (62%), Positives = 203/286 (70%), Gaps = 48/286 (16%)
Query: 1 MSLDIEHLRGLCEKMEDRKELEQAEVIRDALSCKEGMADVKYEKTIQQNGSIKANGSRGS 60
MS DIE LRGLCEKME ++ EQ E +RDALSCK+ + D EK+ QQNGS+KANGS S
Sbjct: 392 MSFDIEQLRGLCEKMEGKEVSEQVEALRDALSCKKNVVD---EKSNQQNGSVKANGSSSS 448
Query: 61 KS-KTEKREKPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVDEIMKATKTVLL 119
+ EK+EKPW+KEEIELLRKG+QK+PKGTSRRWEV+SEYIGTGRSV+EIMKATKTVLL
Sbjct: 449 LAGYIEKKEKPWTKEEIELLRKGIQKFPKGTSRRWEVVSEYIGTGRSVEEIMKATKTVLL 508
Query: 120 QKPDSSKAFDAFLEKRKPAV-SIASPLTTREEVEGAPTNPETGKPENSDA---------- 168
QKPD++KAFD FLEKRKPA +IASPL+TREE+EG T ENSDA
Sbjct: 509 QKPDTAKAFDTFLEKRKPAAQTIASPLSTREELEGVSIPATTT--ENSDAKTTTTIPTPT 566
Query: 169 ------------SSKKDNLEDSQGKSTDDQNSTAVAANGVXXXXXDQDIWSAVQERALVQ 216
++ N EDSQG S +Q+ WSAVQERALVQ
Sbjct: 567 MTTATIPTPVPTATSSINSEDSQGVS-------------------EQEPWSAVQERALVQ 607
Query: 217 ALKAFPKEASQRWERVAAAVPGKTVNQCKKKFTAMKESFRNKKGAV 262
ALK FPKEA+QRWERVAAAVPGKTV QCKKKF MKE+FRNKK AV
Sbjct: 608 ALKTFPKEANQRWERVAAAVPGKTVIQCKKKFAMMKENFRNKKTAV 653
>Medtr8g093080.1 | duplicated homeodomain protein | HC |
chr8:38903936-38902661 | 20130731
Length = 303
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 55/210 (26%)
Query: 54 ANGSRGSKSKTEKREKPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVDEIMKA 113
NG+ + + + EK W++++IE+L+K M K P G RWE I+E G + ++K
Sbjct: 140 GNGNGVALAAVVEEEKEWNEDDIEILKKQMVKNPPGKPGRWEAIAEAFGGRHKAESVVKK 199
Query: 114 TKTVLLQKPDSSKAFDAFLEKRKPA----VSIASPLTTREEVEGAPTNPETGKPENSDAS 169
+K + +K D S +++ FL+KRK V L T E+VE
Sbjct: 200 SKELGEKKVDDSDSYEQFLKKRKALDKRLVEEGGDLATVEKVES---------------- 243
Query: 170 SKKDNLEDSQGKSTDDQNSTAVAANGVXXXXXDQDIWSAVQERALVQALKAFPKEASQRW 229
+WS+ ++ AL+ ALKAFPK+ + RW
Sbjct: 244 -----------------------------------VWSSNEDIALLNALKAFPKDVAMRW 268
Query: 230 ERVAAAVPGKTVNQCKKKFTAMKESFRNKK 259
E+VAAAVPGK+ C K+ +K+ FR K
Sbjct: 269 EKVAAAVPGKSKAACMKRIAELKKGFRTSK 298