Miyakogusa Predicted Gene

Lj4g3v2690750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2690750.1 Non Characterized Hit- tr|I3S4Y2|I3S4Y2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.89,0,2Fe-2S
ferredoxin-like,2Fe-2S ferredoxin-type domain; seg,NULL; no
description,Beta-grasp domain; fd,CUFF.51462.1
         (142 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088720.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...   186   7e-48
Medtr2g006290.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...   183   4e-47
Medtr2g086510.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...   124   4e-29
Medtr1g112030.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...   123   7e-29
Medtr1g112030.2 | 2Fe-2S ferredoxin superfamily protein | HC | c...   123   7e-29
Medtr1g112030.3 | 2Fe-2S ferredoxin superfamily protein | HC | c...   123   7e-29
Medtr1g112030.4 | 2Fe-2S ferredoxin superfamily protein | HC | c...   122   8e-29
Medtr4g053120.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...   122   1e-28
Medtr1g112050.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...   120   4e-28
Medtr5g006320.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...    57   5e-09
Medtr4g098490.1 | 2Fe-2S ferredoxin superfamily protein | HC | c...    52   2e-07

>Medtr8g088720.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr8:36851760-36851051 | 20130731
          Length = 148

 Score =  186 bits (472), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 94/145 (64%), Positives = 109/145 (75%), Gaps = 5/145 (3%)

Query: 3   TTPALSGTMVNTSFLRRQP----LKAFPNVGQALFGLKSGCGGRVT-MAAFKVELITPEG 57
           TT ALSGTMV+TSF+RRQP    L AFPNVGQ LFG+K+G G R+T MA +KV+LITP+G
Sbjct: 4   TTAALSGTMVSTSFIRRQPMNTSLTAFPNVGQTLFGVKAGRGSRITAMATYKVKLITPDG 63

Query: 58  PFEFECPADVYILDHAEEQGIDIPYXXXXXXXXXXXXKVVGGNVDQSDGSFLDDDQIDAG 117
             E  CP + YILD AEEQGID+PY            KVV G VD SD SFLDDDQ+ AG
Sbjct: 64  TKELTCPDNEYILDVAEEQGIDLPYSCRAGACSSCAAKVVEGEVDNSDNSFLDDDQLSAG 123

Query: 118 FVLTCVAYPQSDVVIETHKEEELTA 142
           FVLTCVAYP+SD+VIETHKEE+L +
Sbjct: 124 FVLTCVAYPRSDLVIETHKEEDLVS 148


>Medtr2g006290.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr2:526002-525142 | 20130731
          Length = 150

 Score =  183 bits (465), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 98/154 (63%), Positives = 109/154 (70%), Gaps = 16/154 (10%)

Query: 1   MATTPALSGTMVNTSFLRRQPL--------KAFPNVGQALFGLKSGCGGR----VTMAAF 48
           MATTPAL GT V+TSFLRRQP+        KAFP+     FGLKS  G R    V MA +
Sbjct: 1   MATTPALYGTAVSTSFLRRQPMPVSISTTTKAFPSG----FGLKSKTGKRGDLAVAMATY 56

Query: 49  KVELITPEGPFEFECPADVYILDHAEEQGIDIPYXXXXXXXXXXXXKVVGGNVDQSDGSF 108
           KV+L+TPEG  EF+CP+DVYILDHAEE GID+PY            KV  G VDQSDGSF
Sbjct: 57  KVKLVTPEGTQEFDCPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVAAGAVDQSDGSF 116

Query: 109 LDDDQIDAGFVLTCVAYPQSDVVIETHKEEELTA 142
           LDDDQI+ G+VLTCVAYP SDV IETHKEEELTA
Sbjct: 117 LDDDQIEEGWVLTCVAYPTSDVTIETHKEEELTA 150


>Medtr2g086510.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr2:36370630-36373136 | 20130731
          Length = 155

 Score =  124 bits (310), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/123 (53%), Positives = 82/123 (66%), Gaps = 3/123 (2%)

Query: 20  QPLKAFPNVGQALFGLKSGCGGRVT-MAAFKVELITPEGP-FEFECPADVYILDHAEEQG 77
             L +  NV ++ FGLKS    RVT +AA+KV+LI P+G   EFE   D YILD AE  G
Sbjct: 33  SSLGSAKNVSRS-FGLKSSASSRVTAVAAYKVKLIGPDGKENEFEATDDTYILDAAENAG 91

Query: 78  IDIPYXXXXXXXXXXXXKVVGGNVDQSDGSFLDDDQIDAGFVLTCVAYPQSDVVIETHKE 137
           +++PY            KVV G+VDQSDGSFLDD+Q++ G+VLTCVAYP SD VI THKE
Sbjct: 92  VELPYSCRAGACSTCAGKVVSGSVDQSDGSFLDDNQLNEGYVLTCVAYPTSDCVIHTHKE 151

Query: 138 EEL 140
            +L
Sbjct: 152 GDL 154


>Medtr1g112030.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr1:50655412-50652675 | 20130731
          Length = 156

 Score =  123 bits (308), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 6/143 (4%)

Query: 3   TTPALSGTM--VNTSFLRRQP--LKAFPNVGQALFGLKSGCGGRVTMAAFKVELITPEGP 58
           TT +L GT     +  LR+ P  L++  NV +  FGLKS       MA +KV+LI P+G 
Sbjct: 14  TTASLYGTAPSRTSCALRKSPSSLRSVKNVSKT-FGLKSSSFRVSAMAVYKVKLIGPDGT 72

Query: 59  -FEFECPADVYILDHAEEQGIDIPYXXXXXXXXXXXXKVVGGNVDQSDGSFLDDDQIDAG 117
             EF+ P D YILD AE+ G+++PY            +VV G+VDQSD SFLD+ QI+ G
Sbjct: 73  ENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDEQQIEKG 132

Query: 118 FVLTCVAYPQSDVVIETHKEEEL 140
           ++LTCV+YP+SD VI THKEEEL
Sbjct: 133 YLLTCVSYPKSDTVIYTHKEEEL 155


>Medtr1g112030.2 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr1:50655291-50652678 | 20130731
          Length = 156

 Score =  123 bits (308), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 6/143 (4%)

Query: 3   TTPALSGTM--VNTSFLRRQP--LKAFPNVGQALFGLKSGCGGRVTMAAFKVELITPEGP 58
           TT +L GT     +  LR+ P  L++  NV +  FGLKS       MA +KV+LI P+G 
Sbjct: 14  TTASLYGTAPSRTSCALRKSPSSLRSVKNVSKT-FGLKSSSFRVSAMAVYKVKLIGPDGT 72

Query: 59  -FEFECPADVYILDHAEEQGIDIPYXXXXXXXXXXXXKVVGGNVDQSDGSFLDDDQIDAG 117
             EF+ P D YILD AE+ G+++PY            +VV G+VDQSD SFLD+ QI+ G
Sbjct: 73  ENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDEQQIEKG 132

Query: 118 FVLTCVAYPQSDVVIETHKEEEL 140
           ++LTCV+YP+SD VI THKEEEL
Sbjct: 133 YLLTCVSYPKSDTVIYTHKEEEL 155


>Medtr1g112030.3 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr1:50655297-50652678 | 20130731
          Length = 156

 Score =  123 bits (308), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 6/143 (4%)

Query: 3   TTPALSGTM--VNTSFLRRQP--LKAFPNVGQALFGLKSGCGGRVTMAAFKVELITPEGP 58
           TT +L GT     +  LR+ P  L++  NV +  FGLKS       MA +KV+LI P+G 
Sbjct: 14  TTASLYGTAPSRTSCALRKSPSSLRSVKNVSKT-FGLKSSSFRVSAMAVYKVKLIGPDGT 72

Query: 59  -FEFECPADVYILDHAEEQGIDIPYXXXXXXXXXXXXKVVGGNVDQSDGSFLDDDQIDAG 117
             EF+ P D YILD AE+ G+++PY            +VV G+VDQSD SFLD+ QI+ G
Sbjct: 73  ENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDEQQIEKG 132

Query: 118 FVLTCVAYPQSDVVIETHKEEEL 140
           ++LTCV+YP+SD VI THKEEEL
Sbjct: 133 YLLTCVSYPKSDTVIYTHKEEEL 155


>Medtr1g112030.4 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr1:50655412-50652678 | 20130731
          Length = 160

 Score =  122 bits (307), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 6/143 (4%)

Query: 3   TTPALSGTM--VNTSFLRRQP--LKAFPNVGQALFGLKSGCGGRVTMAAFKVELITPEGP 58
           TT +L GT     +  LR+ P  L++  NV +  FGLKS       MA +KV+LI P+G 
Sbjct: 18  TTASLYGTAPSRTSCALRKSPSSLRSVKNVSKT-FGLKSSSFRVSAMAVYKVKLIGPDGT 76

Query: 59  -FEFECPADVYILDHAEEQGIDIPYXXXXXXXXXXXXKVVGGNVDQSDGSFLDDDQIDAG 117
             EF+ P D YILD AE+ G+++PY            +VV G+VDQSD SFLD+ QI+ G
Sbjct: 77  ENEFDAPDDSYILDSAEDAGVELPYSCRAGACSTCAGQVVTGSVDQSDQSFLDEQQIEKG 136

Query: 118 FVLTCVAYPQSDVVIETHKEEEL 140
           ++LTCV+YP+SD VI THKEEEL
Sbjct: 137 YLLTCVSYPKSDTVIYTHKEEEL 159


>Medtr4g053120.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr4:19231223-19228071 | 20130731
          Length = 155

 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/109 (56%), Positives = 77/109 (70%), Gaps = 2/109 (1%)

Query: 34  GLKSGCGGRVT-MAAFKVELITPEGP-FEFECPADVYILDHAEEQGIDIPYXXXXXXXXX 91
           GLKS    R T MAA+KV+LI P+G   EF+ P DVYILD AE+ G+++PY         
Sbjct: 46  GLKSSSSYRTTAMAAYKVKLIGPDGKENEFDAPDDVYILDAAEDAGVELPYSCRAGACST 105

Query: 92  XXXKVVGGNVDQSDGSFLDDDQIDAGFVLTCVAYPQSDVVIETHKEEEL 140
              K+V G+VDQSDGSFLDD+Q+  GFVLTCV+YP +D +IETHKE EL
Sbjct: 106 CAGKIVSGSVDQSDGSFLDDNQLKDGFVLTCVSYPTADCIIETHKEGEL 154


>Medtr1g112050.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr1:50664256-50662165 | 20130731
          Length = 154

 Score =  120 bits (301), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)

Query: 4   TPALSGTMVN--TSFLRRQP--LKAFPNVGQALFGLKSGCGGRVTMAAFKVELITPEGP- 58
           T +L GT  +  +  L + P  L++  NV +  FGLKS       MA +KV+LI P+G  
Sbjct: 13  TASLHGTASSRTSCALLKNPSTLRSVKNVSKR-FGLKSSSFRISAMAVYKVKLIQPDGTE 71

Query: 59  FEFECPADVYILDHAEEQGIDIPYXXXXXXXXXXXXKVVGGNVDQSDGSFLDDDQIDAGF 118
            EF+ P D YILD AEE G+++PY            +VV G+VDQSD SFLD  QI+ G+
Sbjct: 72  NEFDAPDDYYILDSAEEAGVELPYSCRAGACSTCAGQVVSGSVDQSDQSFLDKQQIEKGY 131

Query: 119 VLTCVAYPQSDVVIETHKEEEL 140
           +LTCV+YP+SD VI THKEEEL
Sbjct: 132 LLTCVSYPKSDTVIYTHKEEEL 153


>Medtr5g006320.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr5:857389-856587 | 20130731
          Length = 153

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 46  AAFKVELITPEGPF-EFECPADVYILDHAEEQGIDIPYXXXXXXXXXXXXKVVGGNVDQS 104
           +++KV +I  EG   + E   D  IL  A + G+D+P+            +++ G VDQS
Sbjct: 50  SSYKV-VIEHEGKTTQLEVEPDETILSKALDSGLDVPHDCKLGVCMTCPARLISGTVDQS 108

Query: 105 DGSFLDDDQIDAGFVLTCVAYPQSDVVIETHKEEEL 140
           DG  L DD ++ G+ L C +YP+SD  I    E+EL
Sbjct: 109 DG-MLSDDVVERGYALLCASYPRSDCHIRVIPEDEL 143


>Medtr4g098490.1 | 2Fe-2S ferredoxin superfamily protein | HC |
           chr4:40576223-40581012 | 20130731
          Length = 186

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%)

Query: 60  EFECPADVYILDHAEEQGIDIPYXXXXXXXXXXXXKVVGGNVDQSDGSFLDDDQIDAGFV 119
           EF  P D YIL  AE Q I +P+            ++  G + Q +   +  +  + G+ 
Sbjct: 78  EFLVPEDQYILHTAESQNITLPFACRHGCCTSCAVRIKNGKIKQPEALGISAELREQGYA 137

Query: 120 LTCVAYPQSDVVIETHKEEEL 140
           L CV++P SD+ +ET  E+E+
Sbjct: 138 LLCVSFPYSDLEVETQDEDEV 158