Miyakogusa Predicted Gene

Lj4g3v2690700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2690700.1 Non Characterized Hit- tr|I3SL87|I3SL87_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.4,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; NIF,NLI interacting factor; ubiqu,CUFF.51457.1
         (333 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088640.1 | ubiquitin-like domain CTD phosphatase | HC | c...   549   e-156
Medtr7g015130.1 | NLI interacting factor-like phosphatase | HC |...    51   1e-06
Medtr7g015130.6 | NLI interacting factor-like phosphatase | HC |...    51   1e-06

>Medtr8g088640.1 | ubiquitin-like domain CTD phosphatase | HC |
           chr8:36805772-36808866 | 20130731
          Length = 335

 Score =  549 bits (1414), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 262/320 (81%), Positives = 283/320 (88%), Gaps = 3/320 (0%)

Query: 17  MTLKVKWAGKDYTVRVCGDDTVGELKRRICELTNVLPIRQKLLYPKLGSKX---XXXXXX 73
           +TLKVKW+GKDYTVRVC DDTVGELKRRICE TNVLPIRQKLLYPKL SK          
Sbjct: 16  ITLKVKWSGKDYTVRVCADDTVGELKRRICESTNVLPIRQKLLYPKLASKLNDDSLLLSQ 75

Query: 74  XXXXXXXXXXKFTMIGTTEEDLIVDPVEAPEIIDDLELPQEEAIDIKDMEVNKHKLTRRI 133
                     KFTMIGTTEEDLIVDPV+ PEI+DD ELPQEEAIDIKDM+VNK KL+RRI
Sbjct: 76  LPINLNNFSLKFTMIGTTEEDLIVDPVDTPEILDDFELPQEEAIDIKDMQVNKLKLSRRI 135

Query: 134 NQFKVELLNPCREGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLASVYSEYDIMIW 193
           N FKVE+ NPCR+GKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFL + Y+EYDIMIW
Sbjct: 136 NNFKVEIKNPCRQGKKLLVLDIDYTLFDHRSTAENPLQLMRPYLHEFLTAAYAEYDIMIW 195

Query: 194 SATSMKWINLKMGQLGVLDNPNYKITALLDHLAMITVQTPSRGVFDCKPLGLIWAKFPEF 253
           SATSMKWI LKM QLGVLDNPNYKITALLDH+ MITVQTPSRGVFDCKPLGLIWA+FPEF
Sbjct: 196 SATSMKWITLKMSQLGVLDNPNYKITALLDHMGMITVQTPSRGVFDCKPLGLIWAQFPEF 255

Query: 254 YNASNTIMFDDLRRNFVMNPQNGLTIRPFRKAHANRDSDQELVKLTQYLLAIAELDDLSK 313
           Y+ASNTIMFDDLRRNFVMNPQNGLTI+PFRKAHANRD+DQELVKLTQYLLAIAELDDLS 
Sbjct: 256 YSASNTIMFDDLRRNFVMNPQNGLTIKPFRKAHANRDTDQELVKLTQYLLAIAELDDLSH 315

Query: 314 LNHHNWESFTDENAKRRRHR 333
           L+H+ WESF+++  KRRRH+
Sbjct: 316 LDHNKWESFSEDTGKRRRHK 335


>Medtr7g015130.1 | NLI interacting factor-like phosphatase | HC |
           chr7:4576595-4571474 | 20130731
          Length = 272

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 31/195 (15%)

Query: 148 KKLLVLDIDYTLFD----------------HRSTAENPLQLM-RPYLHEFLASVYSEYDI 190
           KKL+VLD++  L D                  S  + P  L  R + HEFL   +  +++
Sbjct: 44  KKLIVLDLNGLLADIVSSHPKEVTPDATIARNSLFKRPFSLFKRSFSHEFLNFCFERFEV 103

Query: 191 MIWSATSMKW----INLKMGQLGVLDNPNYKITALLDHLAMITVQTPSRGVFDCKPLGLI 246
            +WS+ S +     I+  MG +  +    + I+   +  A  TV+   R    CK L  I
Sbjct: 104 AVWSSRSKETVDSIIDYLMGDMKQMLIFTWDISHCTE-TAFQTVEN-KRKPLVCKDLRKI 161

Query: 247 WAKF-------PEFYNASNTIMFDDLRRNFVMN-PQNGLTIRPFRKAHANRDSDQELVKL 298
           W K+         +YN SNT++ DD     ++N P N +    F   + N +S      L
Sbjct: 162 WDKYDPNLPWEKGYYNESNTLLLDDSPHKALLNPPYNSIFPHTFSYENQNDNSLAAGGDL 221

Query: 299 TQYLLAIAELDDLSK 313
            QYL  +A  +++ K
Sbjct: 222 RQYLEGLASAENMVK 236


>Medtr7g015130.6 | NLI interacting factor-like phosphatase | HC |
           chr7:4576196-4571567 | 20130731
          Length = 272

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 31/195 (15%)

Query: 148 KKLLVLDIDYTLFD----------------HRSTAENPLQLM-RPYLHEFLASVYSEYDI 190
           KKL+VLD++  L D                  S  + P  L  R + HEFL   +  +++
Sbjct: 44  KKLIVLDLNGLLADIVSSHPKEVTPDATIARNSLFKRPFSLFKRSFSHEFLNFCFERFEV 103

Query: 191 MIWSATSMKW----INLKMGQLGVLDNPNYKITALLDHLAMITVQTPSRGVFDCKPLGLI 246
            +WS+ S +     I+  MG +  +    + I+   +  A  TV+   R    CK L  I
Sbjct: 104 AVWSSRSKETVDSIIDYLMGDMKQMLIFTWDISHCTE-TAFQTVEN-KRKPLVCKDLRKI 161

Query: 247 WAKF-------PEFYNASNTIMFDDLRRNFVMN-PQNGLTIRPFRKAHANRDSDQELVKL 298
           W K+         +YN SNT++ DD     ++N P N +    F   + N +S      L
Sbjct: 162 WDKYDPNLPWEKGYYNESNTLLLDDSPHKALLNPPYNSIFPHTFSYENQNDNSLAAGGDL 221

Query: 299 TQYLLAIAELDDLSK 313
            QYL  +A  +++ K
Sbjct: 222 RQYLEGLASAENMVK 236