Miyakogusa Predicted Gene

Lj4g3v2689680.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2689680.2 Non Characterized Hit- tr|B8AFH3|B8AFH3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,46.79,3e-17,Q9SMC2_NICPL_Q9SMC2;,NULL;
Q3EBQ7_ARATH_Q3EBQ7;,NULL; ACETOLACTATE SYNTHASE III, REGULATORY
SUBUNIT,,CUFF.51461.2
         (470 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088600.1 | acetolactate synthase, small subunit | HC | ch...   736   0.0  

>Medtr8g088600.1 | acetolactate synthase, small subunit | HC |
           chr8:36766913-36775561 | 20130731
          Length = 478

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/472 (79%), Positives = 393/472 (83%), Gaps = 4/472 (0%)

Query: 1   MAATATPLQTLKFHSLHXXXXXXXXXXXXSLISIPHSPTTFRHNKXXXXXXXXXXXXXVX 60
           MA T TP+QT KF   H            +L   P   T+ R+N              V 
Sbjct: 1   MATTLTPIQTFKFTHSHSPSSFPSQPNSTTLFFPPS--TSRRNNNLILSAAATSGDTTVS 58

Query: 61  XXXXXXXXXXXXXXXX--TISVFVGDESGMINRIAGVFARRGFNIESLAVGLNEDKALFT 118
                             TISVFVGDESGMINRIAGVFARRG+NIESLAVGLN+D+ALFT
Sbjct: 59  SNGPPPPPSPSRSKVRRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNQDRALFT 118

Query: 119 IVVSGTETVLRQVVEQLQKLANVLKVEDLSNEPQVERELMLIKVHAEPQNRAELKWLVDI 178
           IVVSGT+ VLRQVVEQLQKL NVLKVEDLS EPQVERELML+KVHA+PQNRAE+KWLVD 
Sbjct: 119 IVVSGTDRVLRQVVEQLQKLVNVLKVEDLSREPQVERELMLVKVHADPQNRAEIKWLVDT 178

Query: 179 FRAKIVDISEHSVTIEVTGDPGKLVAVQRNLSKFGIKEIARTGKIALRREKMGASAPFWR 238
           FRAKIVDISEHSVTIEVTGDPGK+VAVQRN  KFGIKEIARTGKIALRREKMGASAPFWR
Sbjct: 179 FRAKIVDISEHSVTIEVTGDPGKMVAVQRNFGKFGIKEIARTGKIALRREKMGASAPFWR 238

Query: 239 YSAASYPDLEGKPAINALVGVKNRNPVDKNDAPVGGDVYPIEPPDSFTVTQVLDAHWGVL 298
           YSAASYPDLEGK AINALVG KN NPVDK D PVGGDVYPIEP DSFTV QVLDA WG L
Sbjct: 239 YSAASYPDLEGKTAINALVGAKNVNPVDKTDTPVGGDVYPIEPSDSFTVNQVLDAQWGFL 298

Query: 299 NDEDTSGIRSHTLSMLVNDVPGVLNVVTGVFSRRGYNIQSLAVGHSEVEGISRLTTVVPG 358
           NDEDTSGIRSHTLSMLVND PGVLN+VTGVF+RRGYNIQSLAVGHSEVEGISRLTTVVPG
Sbjct: 299 NDEDTSGIRSHTLSMLVNDAPGVLNIVTGVFARRGYNIQSLAVGHSEVEGISRLTTVVPG 358

Query: 359 TDESIGKLLQQLYKLIDLHEVRDLPHMPFAERALMLIKIAVNAAARRDVLDIASIFRAKA 418
           TDESI KL+QQLYKL++L EVRD+ H+PFAER LMLIKIAVNAAARRDVLDIASIFRAKA
Sbjct: 359 TDESISKLVQQLYKLVELREVRDITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKA 418

Query: 419 VDVSDHTITLELTGDLDKMVALQRLLEPYGICEVARTGRIALVRESGVDSKY 470
           VDVSDHTITLELTGDLDKMVALQRLLEPYGICEVARTGRI LVRESGVDSK+
Sbjct: 419 VDVSDHTITLELTGDLDKMVALQRLLEPYGICEVARTGRIGLVRESGVDSKH 470