Miyakogusa Predicted Gene
- Lj4g3v2689680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2689680.1 tr|A3IMC5|A3IMC5_9CHRO Acetolactate synthase
small subunit OS=Cyanothece sp. CCY0110
GN=CY0110_28084,60.71,0.0000000004,Q9SMC2_NICPL_Q9SMC2;,NULL;
Q9SMC2_NICPL_Q9SMC2;,NULL; ACETOLACTATE SYNTHASE III, REGULATORY
SUBUNIT,,CUFF.51461.1
(272 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g088600.1 | acetolactate synthase, small subunit | HC | ch... 509 e-144
>Medtr8g088600.1 | acetolactate synthase, small subunit | HC |
chr8:36766913-36775561 | 20130731
Length = 478
Score = 509 bits (1311), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/272 (90%), Positives = 256/272 (94%)
Query: 1 MINRIAGVFARRGFNIESLAVGLNEDKALFTIVVSGTETVLRQVVEQLQKLANVLKVEDL 60
MINRIAGVFARRG+NIESLAVGLN+D+ALFTIVVSGT+ VLRQVVEQLQKL NVLKVEDL
Sbjct: 88 MINRIAGVFARRGYNIESLAVGLNQDRALFTIVVSGTDRVLRQVVEQLQKLVNVLKVEDL 147
Query: 61 SNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAVQR 120
S EPQVERELML+KVHA+PQNRAE+KWLVD FRAKIVDISEHSVTIEVTGDPGK+VAVQR
Sbjct: 148 SREPQVERELMLVKVHADPQNRAEIKWLVDTFRAKIVDISEHSVTIEVTGDPGKMVAVQR 207
Query: 121 NLSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGKPAINALVGVKNRNPVDK 180
N KFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGK AINALVG KN NPVDK
Sbjct: 208 NFGKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGKTAINALVGAKNVNPVDK 267
Query: 181 NDAPVGGDVYPIEPPDSFTVTQVLDAHWGVLNDEDTSGIRSHTLSMLVNDVPGVLNVVTG 240
D PVGGDVYPIEP DSFTV QVLDA WG LNDEDTSGIRSHTLSMLVND PGVLN+VTG
Sbjct: 268 TDTPVGGDVYPIEPSDSFTVNQVLDAQWGFLNDEDTSGIRSHTLSMLVNDAPGVLNIVTG 327
Query: 241 VFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
VF+RRGYNIQSLAVGHSEVEGISRLTTVVPGT
Sbjct: 328 VFARRGYNIQSLAVGHSEVEGISRLTTVVPGT 359
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 105/155 (67%), Gaps = 2/155 (1%)
Query: 1 MINRIAGVFARRGFNIESLAVGLNEDKAL--FTIVVSGTETVLRQVVEQLQKLANVLKVE 58
++N + GVFARRG+NI+SLAVG +E + + T VV GT+ + ++V+QL KL + +V
Sbjct: 321 VLNIVTGVFARRGYNIQSLAVGHSEVEGISRLTTVVPGTDESISKLVQQLYKLVELREVR 380
Query: 59 DLSNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAV 118
D+++ P ERELMLIK+ R ++ + IFRAK VD+S+H++T+E+TGD K+VA+
Sbjct: 381 DITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTITLELTGDLDKMVAL 440
Query: 119 QRNLSKFGIKEIARTGKIALRREKMGASAPFWRYS 153
QR L +GI E+ARTG+I L RE S YS
Sbjct: 441 QRLLEPYGICEVARTGRIGLVRESGVDSKHLRGYS 475
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 219 IRSHTLSMLVNDVPGVLNVVTGVFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
+R HT+S+ V D G++N + GVF+RRGYNI+SLAVG ++ + T VV GT
Sbjct: 73 VRRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNQDRAL--FTIVVSGT 124