Miyakogusa Predicted Gene

Lj4g3v2689680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2689680.1 tr|A3IMC5|A3IMC5_9CHRO Acetolactate synthase
small subunit OS=Cyanothece sp. CCY0110
GN=CY0110_28084,60.71,0.0000000004,Q9SMC2_NICPL_Q9SMC2;,NULL;
Q9SMC2_NICPL_Q9SMC2;,NULL; ACETOLACTATE SYNTHASE III, REGULATORY
SUBUNIT,,CUFF.51461.1
         (272 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088600.1 | acetolactate synthase, small subunit | HC | ch...   509   e-144

>Medtr8g088600.1 | acetolactate synthase, small subunit | HC |
           chr8:36766913-36775561 | 20130731
          Length = 478

 Score =  509 bits (1311), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/272 (90%), Positives = 256/272 (94%)

Query: 1   MINRIAGVFARRGFNIESLAVGLNEDKALFTIVVSGTETVLRQVVEQLQKLANVLKVEDL 60
           MINRIAGVFARRG+NIESLAVGLN+D+ALFTIVVSGT+ VLRQVVEQLQKL NVLKVEDL
Sbjct: 88  MINRIAGVFARRGYNIESLAVGLNQDRALFTIVVSGTDRVLRQVVEQLQKLVNVLKVEDL 147

Query: 61  SNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAVQR 120
           S EPQVERELML+KVHA+PQNRAE+KWLVD FRAKIVDISEHSVTIEVTGDPGK+VAVQR
Sbjct: 148 SREPQVERELMLVKVHADPQNRAEIKWLVDTFRAKIVDISEHSVTIEVTGDPGKMVAVQR 207

Query: 121 NLSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGKPAINALVGVKNRNPVDK 180
           N  KFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGK AINALVG KN NPVDK
Sbjct: 208 NFGKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGKTAINALVGAKNVNPVDK 267

Query: 181 NDAPVGGDVYPIEPPDSFTVTQVLDAHWGVLNDEDTSGIRSHTLSMLVNDVPGVLNVVTG 240
            D PVGGDVYPIEP DSFTV QVLDA WG LNDEDTSGIRSHTLSMLVND PGVLN+VTG
Sbjct: 268 TDTPVGGDVYPIEPSDSFTVNQVLDAQWGFLNDEDTSGIRSHTLSMLVNDAPGVLNIVTG 327

Query: 241 VFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
           VF+RRGYNIQSLAVGHSEVEGISRLTTVVPGT
Sbjct: 328 VFARRGYNIQSLAVGHSEVEGISRLTTVVPGT 359



 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/155 (46%), Positives = 105/155 (67%), Gaps = 2/155 (1%)

Query: 1   MINRIAGVFARRGFNIESLAVGLNEDKAL--FTIVVSGTETVLRQVVEQLQKLANVLKVE 58
           ++N + GVFARRG+NI+SLAVG +E + +   T VV GT+  + ++V+QL KL  + +V 
Sbjct: 321 VLNIVTGVFARRGYNIQSLAVGHSEVEGISRLTTVVPGTDESISKLVQQLYKLVELREVR 380

Query: 59  DLSNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAV 118
           D+++ P  ERELMLIK+      R ++  +  IFRAK VD+S+H++T+E+TGD  K+VA+
Sbjct: 381 DITHLPFAERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTITLELTGDLDKMVAL 440

Query: 119 QRNLSKFGIKEIARTGKIALRREKMGASAPFWRYS 153
           QR L  +GI E+ARTG+I L RE    S     YS
Sbjct: 441 QRLLEPYGICEVARTGRIGLVRESGVDSKHLRGYS 475



 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 2/54 (3%)

Query: 219 IRSHTLSMLVNDVPGVLNVVTGVFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
           +R HT+S+ V D  G++N + GVF+RRGYNI+SLAVG ++   +   T VV GT
Sbjct: 73  VRRHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNQDRAL--FTIVVSGT 124