Miyakogusa Predicted Gene

Lj4g3v2678570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2678570.1 Non Characterized Hit- tr|B9RR26|B9RR26_RICCO
Pectinmethylesterase inhibitor 2, putative OS=Ricinus
,49.45,6e-16,PMEI,Pectinesterase inhibitor; coiled-coil,NULL; no
description,Pectinesterase inhibitor; PME_inhib:,CUFF.51449.1
         (97 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034220.1 | plant invertase/pectin methylesterase inhibito...    51   2e-07
Medtr8g009300.1 | plant invertase/pectin methylesterase inhibito...    50   6e-07

>Medtr2g034220.1 | plant invertase/pectin methylesterase inhibitor |
           HC | chr2:13075309-13076163 | 20130731
          Length = 284

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 6/90 (6%)

Query: 1   MSRCLSDCIEEYKEARENLQDSAEALAEGDYDKVDTLVSAAMSDAETCEDGFKEVFIYDG 60
           ++  ++DC E+Y  A +NLQ +A+A+A  D   +  ++SA M+D  TCE  F+++     
Sbjct: 199 VASAVADCKEQYNSALDNLQKAADAIASRDLGTITVMLSAVMADVSTCESAFEDL----- 253

Query: 61  NKDYSNPSLTKRNSYFSELCSNALAITKLL 90
            K     +++  +   S   SN L+I  L+
Sbjct: 254 -KASPTSTMSSNDGLVSITVSNCLSIANLI 282


>Medtr8g009300.1 | plant invertase/pectin methylesterase inhibitor |
           HC | chr8:2117013-2117798 | 20130731
          Length = 189

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 7/93 (7%)

Query: 1   MSRCLSDCIEEYKEARENLQDSAEALAEGDYDKVDTLVSAAMSDAETCEDGFKEVFIYDG 60
           +  CL DC++ Y +A    +++        Y++ +  +S+ + D+ TCEDGFK+      
Sbjct: 98  IKECLDDCLDVYSDAITTFREAIRDYKAKRYEECNIKLSSIIDDSTTCEDGFKQ------ 151

Query: 61  NKDYSNPSLTKRNSYFSELCSNALAITKLLAQD 93
             D  +P LTKRN    +L + AL+I  +L +D
Sbjct: 152 KNDVISP-LTKRNKNIFQLSAIALSIVNMLNKD 183