Miyakogusa Predicted Gene

Lj4g3v2668510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2668510.1 Non Characterized Hit- tr|I1MRL4|I1MRL4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22767
PE,74.07,0.000000000002,seg,NULL,CUFF.51436.1
         (82 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g120400.1 | hypothetical protein | HC | chr4:49914270-4991...    58   2e-09

>Medtr4g120400.1 | hypothetical protein | HC |
          chr4:49914270-49913502 | 20130731
          Length = 179

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 2/52 (3%)

Query: 4  MMMVADTVVVPASKSLSVLRASNSPLADSCADQIRAMIQTYDAVAPPPVKPN 55
          MMM+ADTV   A+KSL +LRA    +AD  +DQI AMI   DAVAPPPVKP+
Sbjct: 3  MMMIADTVT--AAKSLCILRAYQFSIADPSSDQISAMIHPCDAVAPPPVKPS 52