Miyakogusa Predicted Gene

Lj4g3v2666320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2666320.1 Non Characterized Hit- tr|C1E680|C1E680_MICSR
Putative uncharacterized protein OS=Micromonas sp.
(st,32.77,0.0000000002,no description,NULL; no
description,Tetratricopeptide-like helical; BINDING / PROTEIN
BINDING,NULL; ,CUFF.51492.1
         (280 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088420.1 | tyrosine phosphatase, putative | HC | chr8:366...   458   e-129
Medtr8g088420.2 | tyrosine phosphatase, putative | HC | chr8:366...   447   e-126
Medtr7g108590.1 | TPR repeat protein | HC | chr7:44238334-442423...    63   3e-10
Medtr7g108590.3 | TPR repeat protein | HC | chr7:44238334-442423...    63   4e-10
Medtr7g108590.2 | TPR repeat protein | HC | chr7:44238334-442423...    63   4e-10
Medtr5g008050.1 | rubredoxin family protein | HC | chr5:1646673-...    53   3e-07
Medtr5g008050.2 | rubredoxin family protein | HC | chr5:1646673-...    53   3e-07

>Medtr8g088420.1 | tyrosine phosphatase, putative | HC |
           chr8:36643142-36646685 | 20130731
          Length = 335

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/265 (83%), Positives = 241/265 (90%)

Query: 16  RPFLFAVKASPEVGSEAPKQGSDKXXXXXXXXXXXXXXLDQPYGLRFVKGRDGGTYIDAI 75
           +PFL+ VKAS EVGS+A K+ S+K              +DQPYG++FVKGRDGGTYIDAI
Sbjct: 55  KPFLYVVKASSEVGSDASKEDSEKGEGEKEPYEEYEVEIDQPYGIKFVKGRDGGTYIDAI 114

Query: 76  APGGAADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKI 135
           APGG+ADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKI
Sbjct: 115 APGGSADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKI 174

Query: 136 ETGGALTEKEIIRAERNSGVISNRVREIQMTNYMRRKEQKEQRENDLKEGLVLYRNAKYE 195
           ETGG LTEKEIIRAERNSGV+SN++REIQM NY+R+KE KE RE DL+EGL+LYRNAKYE
Sbjct: 175 ETGGDLTEKEIIRAERNSGVVSNKLREIQMQNYLRKKEVKEGRERDLREGLLLYRNAKYE 234

Query: 196 EALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQIKAALSSLEEALNSGFEDFKRIRSD 255
           EALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQI+AALS+LEEALNSGFEDFKRIR+D
Sbjct: 235 EALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQIQAALSTLEEALNSGFEDFKRIRTD 294

Query: 256 PDLANLRASEDFDPLIKRFDESFIN 280
           PDLANLRAS +FDPL+KRFDESFIN
Sbjct: 295 PDLANLRASPEFDPLLKRFDESFIN 319


>Medtr8g088420.2 | tyrosine phosphatase, putative | HC |
           chr8:36643146-36646685 | 20130731
          Length = 332

 Score =  447 bits (1151), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/265 (81%), Positives = 238/265 (89%), Gaps = 3/265 (1%)

Query: 16  RPFLFAVKASPEVGSEAPKQGSDKXXXXXXXXXXXXXXLDQPYGLRFVKGRDGGTYIDAI 75
           +PFL+ VKAS EVGS+A K+ S+K              +DQPYG++FVKGRDGGTYIDAI
Sbjct: 55  KPFLYVVKASSEVGSDASKEDSEKGEGEKEPYEEYEVEIDQPYGIKFVKGRDGGTYIDAI 114

Query: 76  APGGAADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRYGKI 135
           APGG+ADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRY   
Sbjct: 115 APGGSADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMRMQKRY--- 171

Query: 136 ETGGALTEKEIIRAERNSGVISNRVREIQMTNYMRRKEQKEQRENDLKEGLVLYRNAKYE 195
           ETGG LTEKEIIRAERNSGV+SN++REIQM NY+R+KE KE RE DL+EGL+LYRNAKYE
Sbjct: 172 ETGGDLTEKEIIRAERNSGVVSNKLREIQMQNYLRKKEVKEGRERDLREGLLLYRNAKYE 231

Query: 196 EALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQIKAALSSLEEALNSGFEDFKRIRSD 255
           EALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQI+AALS+LEEALNSGFEDFKRIR+D
Sbjct: 232 EALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQIQAALSTLEEALNSGFEDFKRIRTD 291

Query: 256 PDLANLRASEDFDPLIKRFDESFIN 280
           PDLANLRAS +FDPL+KRFDESFIN
Sbjct: 292 PDLANLRASPEFDPLLKRFDESFIN 316


>Medtr7g108590.1 | TPR repeat protein | HC | chr7:44238334-44242357
           | 20130731
          Length = 446

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 47/86 (54%)

Query: 185 GLVLYRNAKYEEALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQIKAALSSLEEALNS 244
           GL L+   K ++AL +FE+ L   P P EA  A YN ACC++   + K A + L  AL  
Sbjct: 75  GLELFSKGKVKDALAQFETALSLNPNPVEAQAAFYNKACCHAYRGEGKKAANCLRTALRE 134

Query: 245 GFEDFKRIRSDPDLANLRASEDFDPL 270
               F  I +DPDLA+ RA  +F  L
Sbjct: 135 YNLKFGTILNDPDLASFRALPEFKEL 160


>Medtr7g108590.3 | TPR repeat protein | HC | chr7:44238334-44242339
           | 20130731
          Length = 389

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 47/86 (54%)

Query: 185 GLVLYRNAKYEEALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQIKAALSSLEEALNS 244
           GL L+   K ++AL +FE+ L   P P EA  A YN ACC++   + K A + L  AL  
Sbjct: 75  GLELFSKGKVKDALAQFETALSLNPNPVEAQAAFYNKACCHAYRGEGKKAANCLRTALRE 134

Query: 245 GFEDFKRIRSDPDLANLRASEDFDPL 270
               F  I +DPDLA+ RA  +F  L
Sbjct: 135 YNLKFGTILNDPDLASFRALPEFKEL 160


>Medtr7g108590.2 | TPR repeat protein | HC | chr7:44238334-44242350
           | 20130731
          Length = 364

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 47/86 (54%)

Query: 185 GLVLYRNAKYEEALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQIKAALSSLEEALNS 244
           GL L+   K ++AL +FE+ L   P P EA  A YN ACC++   + K A + L  AL  
Sbjct: 75  GLELFSKGKVKDALAQFETALSLNPNPVEAQAAFYNKACCHAYRGEGKKAANCLRTALRE 134

Query: 245 GFEDFKRIRSDPDLANLRASEDFDPL 270
               F  I +DPDLA+ RA  +F  L
Sbjct: 135 YNLKFGTILNDPDLASFRALPEFKEL 160


>Medtr5g008050.1 | rubredoxin family protein | HC |
           chr5:1646673-1649325 | 20130731
          Length = 273

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 13/108 (12%)

Query: 54  LDQPYGLRFVKGRDGGTYIDAIAPGGAADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRT 113
           +D+P GL   +   GG  I A+  GG A +AG+ + GD+VL TS+ FG E+WPA + G T
Sbjct: 90  VDKPLGLTLGQKNGGGVVITAVEGGGNAARAGLKS-GDQVLYTSSFFGDELWPADKLGFT 148

Query: 114 ----------MYTIRQRIGP--LLMRMQKRYGKIETGGALTEKEIIRA 149
                     +Y +  R G    + R+ KR      G  LTE +  RA
Sbjct: 149 KTAINAKPDSVYFVVSRGGADVDVKRLPKRPAPPRFGRKLTETQKARA 196


>Medtr5g008050.2 | rubredoxin family protein | HC |
           chr5:1646673-1649325 | 20130731
          Length = 222

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 54  LDQPYGLRFVKGRDGGTYIDAIAPGGAADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRT 113
           +D+P GL   +   GG  I A+  GG A +AG+ + GD+VL TS+ FG E+WPA + G T
Sbjct: 90  VDKPLGLTLGQKNGGGVVITAVEGGGNAARAGLKS-GDQVLYTSSFFGDELWPADKLGFT 148

Query: 114 MYTIRQR 120
              I  +
Sbjct: 149 KTAINAK 155