Miyakogusa Predicted Gene

Lj4g3v2641060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2641060.1 Non Characterized Hit- tr|C5Z0B3|C5Z0B3_SORBI
Putative uncharacterized protein Sb09g024330 OS=Sorghu,46.77,4e-18,
,NODE_41354_length_990_cov_94.516159.path2.1
         (124 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g090930.1 | hypothetical protein | HC | chr7:35835582-3583...   178   1e-45
Medtr7g090930.2 | hypothetical protein | HC | chr7:35835582-3583...   173   3e-44

>Medtr7g090930.1 | hypothetical protein | HC |
           chr7:35835582-35832863 | 20130731
          Length = 135

 Score =  178 bits (451), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/135 (71%), Positives = 101/135 (74%), Gaps = 11/135 (8%)

Query: 1   MMSDKNQSKLVQDVVADTTPSEMDDKDVA-----------ETKIVDRKGGENCPKGAPLE 49
           MM DKN S  V+DV  DT  S++DDKDV            ETK  D KGGEN PKG  LE
Sbjct: 1   MMQDKNGSTPVKDVSNDTNLSKIDDKDVLKHFTRGSEDVEETKPGDSKGGENRPKGTSLE 60

Query: 50  EISASGDVNMEVPITPDDVIRAGGFGARDDIGSFLPVASDSTDFEASIRDARDYEEPQGE 109
           E   SGDVNME  ITPDDVIRAGGFGARDDI SFLPVASDSTDFEASIRDARDYEEPQG+
Sbjct: 61  ESDVSGDVNMEASITPDDVIRAGGFGARDDISSFLPVASDSTDFEASIRDARDYEEPQGK 120

Query: 110 VSRPGLGWTGTTKEE 124
           VSRPGLGWTG TK E
Sbjct: 121 VSRPGLGWTGATKGE 135


>Medtr7g090930.2 | hypothetical protein | HC |
           chr7:35835582-35832863 | 20130731
          Length = 143

 Score =  173 bits (439), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 95/133 (71%), Positives = 100/133 (75%), Gaps = 11/133 (8%)

Query: 3   SDKNQSKLVQDVVADTTPSEMDDKDVA-----------ETKIVDRKGGENCPKGAPLEEI 51
           +DKN S  V+DV  DT  S++DDKDV            ETK  D KGGEN PKG  LEE 
Sbjct: 11  TDKNGSTPVKDVSNDTNLSKIDDKDVLKHFTRGSEDVEETKPGDSKGGENRPKGTSLEES 70

Query: 52  SASGDVNMEVPITPDDVIRAGGFGARDDIGSFLPVASDSTDFEASIRDARDYEEPQGEVS 111
             SGDVNME  ITPDDVIRAGGFGARDDI SFLPVASDSTDFEASIRDARDYEEPQG+VS
Sbjct: 71  DVSGDVNMEASITPDDVIRAGGFGARDDISSFLPVASDSTDFEASIRDARDYEEPQGKVS 130

Query: 112 RPGLGWTGTTKEE 124
           RPGLGWTG TK E
Sbjct: 131 RPGLGWTGATKGE 143