Miyakogusa Predicted Gene
- Lj4g3v2629890.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2629890.1 Non Characterized Hit- tr|I1KSK4|I1KSK4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33378
PE,71.26,0,TPR-like,NULL; HAT (Half-A-TPR) repeats,RNA-processing
protein, HAT helix; seg,NULL; SUBFAMILY NOT N,CUFF.51393.1
(1165 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g088050.1 | Pre-mRNA-processing factor 39, putative | HC |... 1225 0.0
Medtr8g088050.3 | Pre-mRNA-processing factor 39, putative | HC |... 1225 0.0
Medtr8g088050.2 | Pre-mRNA-processing factor 39, putative | HC |... 1225 0.0
Medtr7g098430.1 | Pre-mRNA-processing factor 39 | HC | chr7:3939... 412 e-114
Medtr6g026900.2 | cleavage stimulation factor | HC | chr6:909410... 51 6e-06
Medtr6g026900.1 | cleavage stimulation factor | HC | chr6:909424... 51 6e-06
>Medtr8g088050.1 | Pre-mRNA-processing factor 39, putative | HC |
chr8:36447242-36458261 | 20130731
Length = 1188
Score = 1225 bits (3169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/975 (63%), Positives = 719/975 (73%), Gaps = 37/975 (3%)
Query: 1 MAALCPTLSFATDDNVELEDVVSKGSLAFDEWTILISEIDNTYPDKVEKICLVYDHFLSK 60
M + C T S A++DN+ELE+V+SKGSL FDEW LI++I+ YPD VEKIC+VY HFLS+
Sbjct: 1 MVSQCLTESPASNDNLELEEVISKGSLDFDEWVSLIADIEKIYPDNVEKICVVYKHFLSE 60
Query: 61 FPLCYGYWRKYAAHMARLCPADKVVEVFEQAVLAATYSVGMWVDYCSFGMLAFEEPSDIR 120
FPLC+GYWRKYAAHM +L DKVVEVFEQAV AATYSVGMWVDYCSFGM +FE+ SDIR
Sbjct: 61 FPLCHGYWRKYAAHMTQLSTMDKVVEVFEQAVSAATYSVGMWVDYCSFGMSSFEDASDIR 120
Query: 121 RLFKRAISFVGKDYLCHTLWDKYIQFEFSQQQWISLAHVYIQTLKFPTKKLHQYYDSFKK 180
RLFKRAISFVGKDYLCHTLWD+YI FEFSQQQW LAH+YIQTLKFPTKKLHQYYDSFKK
Sbjct: 121 RLFKRAISFVGKDYLCHTLWDRYIHFEFSQQQWTCLAHIYIQTLKFPTKKLHQYYDSFKK 180
Query: 181 LATFLEEGMTSLDNSPKQLQSESCFDGEIPMTMCCKDDEIYCIIKDMMDSSVGMACSIAV 240
L TFLEEG+TS ++SPK+ QSE C DGEIPMTMC DDEIYC+IKDM+DS VG+ S A+
Sbjct: 181 LLTFLEEGITSRESSPKESQSEPCLDGEIPMTMCRDDDEIYCVIKDMVDSPVGLTSSTAL 240
Query: 241 KKYRVIGEQLYHNACELYSKISSFEANIERHYFHVQPLDAKQLQNWHDYLDFIELQGDFD 300
KKYR+IGEQLYHNACELYSKISSFEANI+R+YF +PLDA QLQNWH YLDFIEL GDFD
Sbjct: 241 KKYRIIGEQLYHNACELYSKISSFEANIQRYYFDFRPLDANQLQNWHAYLDFIELHGDFD 300
Query: 301 WAVKLYERCLIVCANYSDYWMRYVDFMEAKGGREIANYSLDRATEIYLKSVPAIHSFNAR 360
WAVKLYERCLIVCANY DYWMRY DFMEAKGGREIANYSLDRATEIYLKSVPAIH FNAR
Sbjct: 301 WAVKLYERCLIVCANYPDYWMRYADFMEAKGGREIANYSLDRATEIYLKSVPAIHLFNAR 360
Query: 361 FKEQIGDVIAARALYIQRGKGTDSDFVESVKSIANMEKRLGNMESAFNIYKXXXXXXXXX 420
FKEQIGDV+AARA YI R K TDSDFVE+V S ANMEKRLGNMESAF+IYK
Sbjct: 361 FKEQIGDVLAARAAYIHRCKETDSDFVENVISKANMEKRLGNMESAFSIYKEALEIAAAE 420
Query: 421 XXXXXXPLLYIHLSRLKYMSTNSEDASRDVLIDGIRTLPPNKLLLEELIKFSMVHGGTKH 480
P+LY+H SRLK+MSTN DA+R VLIDGIRTLP NKLLLEEL+KFSM+HGG KH
Sbjct: 421 EKQPALPILYVHFSRLKFMSTNDVDAARVVLIDGIRTLPQNKLLLEELMKFSMMHGGAKH 480
Query: 481 ITLIDTIIADALSPRSDESQGLGTEDAEDISKLYLEFVDYCGTIHDVKKAWNRHMKLFPG 540
I +D+IIA A+SPR++ SQGL EDAEDIS LYLEFVDYCGTIHDV++A NRH++L PG
Sbjct: 481 IDELDSIIAGAISPRANGSQGLSAEDAEDISNLYLEFVDYCGTIHDVRRALNRHIRLCPG 540
Query: 541 STRIDFRHQSAKCQGSLNLIQHKREEVLVALPNQASRDSSSDMHANLPQE----NRKVSS 596
S RID R QS K + LNLI+ KREE+ VA+PNQ RD SS++ ++ + ++ +
Sbjct: 541 SARIDLRQQSIKSKRPLNLIKDKREEISVAMPNQEPRDPSSNLEDHIIRSYDTNTARLQT 600
Query: 597 EYCDTQLDPTADELNHIT--QSNDTDMHGLQIMESDDKAGNNGRDLAL--PEEPRDNGPE 652
D +++ A EL + + D D LQ MESDDKA +N RDL+L EEPR+N PE
Sbjct: 601 VESDDKVEDDARELPLLVSEEPRDIDTARLQTMESDDKAEDNARDLSLSVSEEPRNNDPE 660
Query: 653 NKLPSADLVEVEEEPGLVDKNLKRNCSESDVSSENLLQQTASGN---KSLKASSNENAVF 709
L S DLV +EE + KN K++CSESD+SSENLL Q A N ++L+ASSNE +V
Sbjct: 661 RNLSSIDLVGAKEESTKI-KNFKKDCSESDISSENLLHQIAIVNQPSQALQASSNEKSVS 719
Query: 710 SQ--CELETEELNPRE----------STCPDSELMTSQEECDTIPERSKLNSRTVAGGHT 757
SQ CEL+TEEL P +TCPDS L+ SQ EC+TIPE NSR V GG+T
Sbjct: 720 SQGKCELKTEELKPLSVTSAPLNTLVNTCPDSGLVASQVECETIPESCNSNSRAVVGGYT 779
Query: 758 SNQDNSA-STQDSESAQTHVEINNSYSACHQDERARRSLLPPRFSRNSDGKWHQKRNTGN 816
+N+ NS+ STQDS+ +THVE N YS+ H+D +R LLPPRFSRN G +N
Sbjct: 780 ANRYNSSRSTQDSDYPRTHVERNRPYSSSHRDHNMKRPLLPPRFSRNGGGNRDPIKNDNK 839
Query: 817 FRR----------GHKYGHREYTHRKXXXXXXXXXXXXXXAGGGPQLPVTPGYAQSEMXX 866
FRR G KYG+REY R A G Q PVTPG +QS +
Sbjct: 840 FRRAPKYGNRGRGGPKYGNREYPRRNEHQHRSLSPQQIHLAERGAQFPVTPGCSQSALQV 899
Query: 867 XXXXXXXXXXXXXSTPADFVATHSWPIQNIPIQNSLSQSQSPANITSHVFQ--HPMQGNV 924
+T A FV SWPIQN+ IQNSL QSQ P + TS+V Q H MQG+
Sbjct: 900 QQCNQRQDQFQATATTAGFVTPQSWPIQNVQIQNSLPQSQLPVSTTSNVLQHGHAMQGSE 959
Query: 925 QYGYMQNGQEHNQMW 939
QYGYMQ GQ++NQMW
Sbjct: 960 QYGYMQKGQDYNQMW 974
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 29/38 (76%)
Query: 1127 VADQGQAIVTSQSNEEIMSQQSGEPGLVSSPVLDHPQE 1164
V DQ QAI+T Q E I SQQSG+ GL+SSPVL HPQE
Sbjct: 1145 VEDQAQAILTPQGQEAISSQQSGDHGLISSPVLHHPQE 1182
>Medtr8g088050.3 | Pre-mRNA-processing factor 39, putative | HC |
chr8:36447242-36458261 | 20130731
Length = 1182
Score = 1225 bits (3169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/975 (63%), Positives = 719/975 (73%), Gaps = 37/975 (3%)
Query: 1 MAALCPTLSFATDDNVELEDVVSKGSLAFDEWTILISEIDNTYPDKVEKICLVYDHFLSK 60
M + C T S A++DN+ELE+V+SKGSL FDEW LI++I+ YPD VEKIC+VY HFLS+
Sbjct: 1 MVSQCLTESPASNDNLELEEVISKGSLDFDEWVSLIADIEKIYPDNVEKICVVYKHFLSE 60
Query: 61 FPLCYGYWRKYAAHMARLCPADKVVEVFEQAVLAATYSVGMWVDYCSFGMLAFEEPSDIR 120
FPLC+GYWRKYAAHM +L DKVVEVFEQAV AATYSVGMWVDYCSFGM +FE+ SDIR
Sbjct: 61 FPLCHGYWRKYAAHMTQLSTMDKVVEVFEQAVSAATYSVGMWVDYCSFGMSSFEDASDIR 120
Query: 121 RLFKRAISFVGKDYLCHTLWDKYIQFEFSQQQWISLAHVYIQTLKFPTKKLHQYYDSFKK 180
RLFKRAISFVGKDYLCHTLWD+YI FEFSQQQW LAH+YIQTLKFPTKKLHQYYDSFKK
Sbjct: 121 RLFKRAISFVGKDYLCHTLWDRYIHFEFSQQQWTCLAHIYIQTLKFPTKKLHQYYDSFKK 180
Query: 181 LATFLEEGMTSLDNSPKQLQSESCFDGEIPMTMCCKDDEIYCIIKDMMDSSVGMACSIAV 240
L TFLEEG+TS ++SPK+ QSE C DGEIPMTMC DDEIYC+IKDM+DS VG+ S A+
Sbjct: 181 LLTFLEEGITSRESSPKESQSEPCLDGEIPMTMCRDDDEIYCVIKDMVDSPVGLTSSTAL 240
Query: 241 KKYRVIGEQLYHNACELYSKISSFEANIERHYFHVQPLDAKQLQNWHDYLDFIELQGDFD 300
KKYR+IGEQLYHNACELYSKISSFEANI+R+YF +PLDA QLQNWH YLDFIEL GDFD
Sbjct: 241 KKYRIIGEQLYHNACELYSKISSFEANIQRYYFDFRPLDANQLQNWHAYLDFIELHGDFD 300
Query: 301 WAVKLYERCLIVCANYSDYWMRYVDFMEAKGGREIANYSLDRATEIYLKSVPAIHSFNAR 360
WAVKLYERCLIVCANY DYWMRY DFMEAKGGREIANYSLDRATEIYLKSVPAIH FNAR
Sbjct: 301 WAVKLYERCLIVCANYPDYWMRYADFMEAKGGREIANYSLDRATEIYLKSVPAIHLFNAR 360
Query: 361 FKEQIGDVIAARALYIQRGKGTDSDFVESVKSIANMEKRLGNMESAFNIYKXXXXXXXXX 420
FKEQIGDV+AARA YI R K TDSDFVE+V S ANMEKRLGNMESAF+IYK
Sbjct: 361 FKEQIGDVLAARAAYIHRCKETDSDFVENVISKANMEKRLGNMESAFSIYKEALEIAAAE 420
Query: 421 XXXXXXPLLYIHLSRLKYMSTNSEDASRDVLIDGIRTLPPNKLLLEELIKFSMVHGGTKH 480
P+LY+H SRLK+MSTN DA+R VLIDGIRTLP NKLLLEEL+KFSM+HGG KH
Sbjct: 421 EKQPALPILYVHFSRLKFMSTNDVDAARVVLIDGIRTLPQNKLLLEELMKFSMMHGGAKH 480
Query: 481 ITLIDTIIADALSPRSDESQGLGTEDAEDISKLYLEFVDYCGTIHDVKKAWNRHMKLFPG 540
I +D+IIA A+SPR++ SQGL EDAEDIS LYLEFVDYCGTIHDV++A NRH++L PG
Sbjct: 481 IDELDSIIAGAISPRANGSQGLSAEDAEDISNLYLEFVDYCGTIHDVRRALNRHIRLCPG 540
Query: 541 STRIDFRHQSAKCQGSLNLIQHKREEVLVALPNQASRDSSSDMHANLPQE----NRKVSS 596
S RID R QS K + LNLI+ KREE+ VA+PNQ RD SS++ ++ + ++ +
Sbjct: 541 SARIDLRQQSIKSKRPLNLIKDKREEISVAMPNQEPRDPSSNLEDHIIRSYDTNTARLQT 600
Query: 597 EYCDTQLDPTADELNHIT--QSNDTDMHGLQIMESDDKAGNNGRDLAL--PEEPRDNGPE 652
D +++ A EL + + D D LQ MESDDKA +N RDL+L EEPR+N PE
Sbjct: 601 VESDDKVEDDARELPLLVSEEPRDIDTARLQTMESDDKAEDNARDLSLSVSEEPRNNDPE 660
Query: 653 NKLPSADLVEVEEEPGLVDKNLKRNCSESDVSSENLLQQTASGN---KSLKASSNENAVF 709
L S DLV +EE + KN K++CSESD+SSENLL Q A N ++L+ASSNE +V
Sbjct: 661 RNLSSIDLVGAKEESTKI-KNFKKDCSESDISSENLLHQIAIVNQPSQALQASSNEKSVS 719
Query: 710 SQ--CELETEELNPRE----------STCPDSELMTSQEECDTIPERSKLNSRTVAGGHT 757
SQ CEL+TEEL P +TCPDS L+ SQ EC+TIPE NSR V GG+T
Sbjct: 720 SQGKCELKTEELKPLSVTSAPLNTLVNTCPDSGLVASQVECETIPESCNSNSRAVVGGYT 779
Query: 758 SNQDNSA-STQDSESAQTHVEINNSYSACHQDERARRSLLPPRFSRNSDGKWHQKRNTGN 816
+N+ NS+ STQDS+ +THVE N YS+ H+D +R LLPPRFSRN G +N
Sbjct: 780 ANRYNSSRSTQDSDYPRTHVERNRPYSSSHRDHNMKRPLLPPRFSRNGGGNRDPIKNDNK 839
Query: 817 FRR----------GHKYGHREYTHRKXXXXXXXXXXXXXXAGGGPQLPVTPGYAQSEMXX 866
FRR G KYG+REY R A G Q PVTPG +QS +
Sbjct: 840 FRRAPKYGNRGRGGPKYGNREYPRRNEHQHRSLSPQQIHLAERGAQFPVTPGCSQSALQV 899
Query: 867 XXXXXXXXXXXXXSTPADFVATHSWPIQNIPIQNSLSQSQSPANITSHVFQ--HPMQGNV 924
+T A FV SWPIQN+ IQNSL QSQ P + TS+V Q H MQG+
Sbjct: 900 QQCNQRQDQFQATATTAGFVTPQSWPIQNVQIQNSLPQSQLPVSTTSNVLQHGHAMQGSE 959
Query: 925 QYGYMQNGQEHNQMW 939
QYGYMQ GQ++NQMW
Sbjct: 960 QYGYMQKGQDYNQMW 974
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 29/38 (76%)
Query: 1127 VADQGQAIVTSQSNEEIMSQQSGEPGLVSSPVLDHPQE 1164
V DQ QAI+T Q E I SQQSG+ GL+SSPVL HPQE
Sbjct: 1139 VEDQAQAILTPQGQEAISSQQSGDHGLISSPVLHHPQE 1176
>Medtr8g088050.2 | Pre-mRNA-processing factor 39, putative | HC |
chr8:36447242-36458284 | 20130731
Length = 1187
Score = 1225 bits (3169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/975 (63%), Positives = 719/975 (73%), Gaps = 37/975 (3%)
Query: 1 MAALCPTLSFATDDNVELEDVVSKGSLAFDEWTILISEIDNTYPDKVEKICLVYDHFLSK 60
M + C T S A++DN+ELE+V+SKGSL FDEW LI++I+ YPD VEKIC+VY HFLS+
Sbjct: 1 MVSQCLTESPASNDNLELEEVISKGSLDFDEWVSLIADIEKIYPDNVEKICVVYKHFLSE 60
Query: 61 FPLCYGYWRKYAAHMARLCPADKVVEVFEQAVLAATYSVGMWVDYCSFGMLAFEEPSDIR 120
FPLC+GYWRKYAAHM +L DKVVEVFEQAV AATYSVGMWVDYCSFGM +FE+ SDIR
Sbjct: 61 FPLCHGYWRKYAAHMTQLSTMDKVVEVFEQAVSAATYSVGMWVDYCSFGMSSFEDASDIR 120
Query: 121 RLFKRAISFVGKDYLCHTLWDKYIQFEFSQQQWISLAHVYIQTLKFPTKKLHQYYDSFKK 180
RLFKRAISFVGKDYLCHTLWD+YI FEFSQQQW LAH+YIQTLKFPTKKLHQYYDSFKK
Sbjct: 121 RLFKRAISFVGKDYLCHTLWDRYIHFEFSQQQWTCLAHIYIQTLKFPTKKLHQYYDSFKK 180
Query: 181 LATFLEEGMTSLDNSPKQLQSESCFDGEIPMTMCCKDDEIYCIIKDMMDSSVGMACSIAV 240
L TFLEEG+TS ++SPK+ QSE C DGEIPMTMC DDEIYC+IKDM+DS VG+ S A+
Sbjct: 181 LLTFLEEGITSRESSPKESQSEPCLDGEIPMTMCRDDDEIYCVIKDMVDSPVGLTSSTAL 240
Query: 241 KKYRVIGEQLYHNACELYSKISSFEANIERHYFHVQPLDAKQLQNWHDYLDFIELQGDFD 300
KKYR+IGEQLYHNACELYSKISSFEANI+R+YF +PLDA QLQNWH YLDFIEL GDFD
Sbjct: 241 KKYRIIGEQLYHNACELYSKISSFEANIQRYYFDFRPLDANQLQNWHAYLDFIELHGDFD 300
Query: 301 WAVKLYERCLIVCANYSDYWMRYVDFMEAKGGREIANYSLDRATEIYLKSVPAIHSFNAR 360
WAVKLYERCLIVCANY DYWMRY DFMEAKGGREIANYSLDRATEIYLKSVPAIH FNAR
Sbjct: 301 WAVKLYERCLIVCANYPDYWMRYADFMEAKGGREIANYSLDRATEIYLKSVPAIHLFNAR 360
Query: 361 FKEQIGDVIAARALYIQRGKGTDSDFVESVKSIANMEKRLGNMESAFNIYKXXXXXXXXX 420
FKEQIGDV+AARA YI R K TDSDFVE+V S ANMEKRLGNMESAF+IYK
Sbjct: 361 FKEQIGDVLAARAAYIHRCKETDSDFVENVISKANMEKRLGNMESAFSIYKEALEIAAAE 420
Query: 421 XXXXXXPLLYIHLSRLKYMSTNSEDASRDVLIDGIRTLPPNKLLLEELIKFSMVHGGTKH 480
P+LY+H SRLK+MSTN DA+R VLIDGIRTLP NKLLLEEL+KFSM+HGG KH
Sbjct: 421 EKQPALPILYVHFSRLKFMSTNDVDAARVVLIDGIRTLPQNKLLLEELMKFSMMHGGAKH 480
Query: 481 ITLIDTIIADALSPRSDESQGLGTEDAEDISKLYLEFVDYCGTIHDVKKAWNRHMKLFPG 540
I +D+IIA A+SPR++ SQGL EDAEDIS LYLEFVDYCGTIHDV++A NRH++L PG
Sbjct: 481 IDELDSIIAGAISPRANGSQGLSAEDAEDISNLYLEFVDYCGTIHDVRRALNRHIRLCPG 540
Query: 541 STRIDFRHQSAKCQGSLNLIQHKREEVLVALPNQASRDSSSDMHANLPQE----NRKVSS 596
S RID R QS K + LNLI+ KREE+ VA+PNQ RD SS++ ++ + ++ +
Sbjct: 541 SARIDLRQQSIKSKRPLNLIKDKREEISVAMPNQEPRDPSSNLEDHIIRSYDTNTARLQT 600
Query: 597 EYCDTQLDPTADELNHIT--QSNDTDMHGLQIMESDDKAGNNGRDLAL--PEEPRDNGPE 652
D +++ A EL + + D D LQ MESDDKA +N RDL+L EEPR+N PE
Sbjct: 601 VESDDKVEDDARELPLLVSEEPRDIDTARLQTMESDDKAEDNARDLSLSVSEEPRNNDPE 660
Query: 653 NKLPSADLVEVEEEPGLVDKNLKRNCSESDVSSENLLQQTASGN---KSLKASSNENAVF 709
L S DLV +EE + KN K++CSESD+SSENLL Q A N ++L+ASSNE +V
Sbjct: 661 RNLSSIDLVGAKEESTKI-KNFKKDCSESDISSENLLHQIAIVNQPSQALQASSNEKSVS 719
Query: 710 SQ--CELETEELNPRE----------STCPDSELMTSQEECDTIPERSKLNSRTVAGGHT 757
SQ CEL+TEEL P +TCPDS L+ SQ EC+TIPE NSR V GG+T
Sbjct: 720 SQGKCELKTEELKPLSVTSAPLNTLVNTCPDSGLVASQVECETIPESCNSNSRAVVGGYT 779
Query: 758 SNQDNSA-STQDSESAQTHVEINNSYSACHQDERARRSLLPPRFSRNSDGKWHQKRNTGN 816
+N+ NS+ STQDS+ +THVE N YS+ H+D +R LLPPRFSRN G +N
Sbjct: 780 ANRYNSSRSTQDSDYPRTHVERNRPYSSSHRDHNMKRPLLPPRFSRNGGGNRDPIKNDNK 839
Query: 817 FRR----------GHKYGHREYTHRKXXXXXXXXXXXXXXAGGGPQLPVTPGYAQSEMXX 866
FRR G KYG+REY R A G Q PVTPG +QS +
Sbjct: 840 FRRAPKYGNRGRGGPKYGNREYPRRNEHQHRSLSPQQIHLAERGAQFPVTPGCSQSALQV 899
Query: 867 XXXXXXXXXXXXXSTPADFVATHSWPIQNIPIQNSLSQSQSPANITSHVFQ--HPMQGNV 924
+T A FV SWPIQN+ IQNSL QSQ P + TS+V Q H MQG+
Sbjct: 900 QQCNQRQDQFQATATTAGFVTPQSWPIQNVQIQNSLPQSQLPVSTTSNVLQHGHAMQGSE 959
Query: 925 QYGYMQNGQEHNQMW 939
QYGYMQ GQ++NQMW
Sbjct: 960 QYGYMQKGQDYNQMW 974
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 29/38 (76%)
Query: 1127 VADQGQAIVTSQSNEEIMSQQSGEPGLVSSPVLDHPQE 1164
V DQ QAI+T Q E I SQQSG+ GL+SSPVL HPQE
Sbjct: 1144 VEDQAQAILTPQGQEAISSQQSGDHGLISSPVLHHPQE 1181
>Medtr7g098430.1 | Pre-mRNA-processing factor 39 | HC |
chr7:39392862-39401978 | 20130731
Length = 826
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/525 (38%), Positives = 312/525 (59%), Gaps = 9/525 (1%)
Query: 18 LEDVVSKGSLAFDEWTILISEIDNTYPDKVEKICLVYDHFLSKFPLCYGYWRKYAAHMAR 77
L ++V+ S F WT LI E + + + K+ VYD FL++FPLCYGYW+KYA H AR
Sbjct: 158 LWNIVTANSSDFTAWTSLIDETEKVAENNILKMRRVYDAFLAEFPLCYGYWKKYADHEAR 217
Query: 78 LCPADKVVEVFEQAVLAATYSVGMWVDYCSFGMLAFEEPSDIRRLFKRAISFVGKDYLCH 137
L ADKVVEV+E+AV TYSV MW+ YC F + + +P +RRLF+R +++VG DYL
Sbjct: 218 LGSADKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSF 277
Query: 138 TLWDKYIQFEFSQQQWISLAHVYIQTLKFPTKKLHQYYDSFKKLATFLEEGMTSLDNSPK 197
LWDKYI++E+ QQ W LA +Y + L+ P ++L +Y++SFK+LA+ ++ L + +
Sbjct: 278 PLWDKYIEYEYMQQDWARLAMIYTRILENPNQQLDRYFNSFKELAS--NRPLSELRTADE 335
Query: 198 QLQSESCFDGEIPMTMCCKDDEIYCIIKD--MMDSSVGMACSIAVKKYRVIGEQLYHNAC 255
I + + E++ D +S G+ + ++KY I E++Y A
Sbjct: 336 AAAVAGVVSEGIDQGV---EGEVHPDGADNSPKPASAGLTEAEELEKYIAIREEMYKKAK 392
Query: 256 ELYSKISSFEANIERHYFHVQPLDAKQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCAN 315
E SKI FE I R YFHV+PL+ +L+NWH+YLDFIE +GD VKLYERC+I CAN
Sbjct: 393 EFDSKIIGFETTIRRPYFHVRPLNIGELENWHNYLDFIEREGDLSKIVKLYERCVIACAN 452
Query: 316 YSDYWMRYVDFMEAKGGREIANYSLDRATEIYLKSVPAIHSFNARFKEQIGDVIAARALY 375
Y +YW+RYV MEA ++AN L RA+++++K P IH F ARFKEQ GD++ ARA Y
Sbjct: 453 YPEYWIRYVLCMEASESMDLANNVLARASQVFVKRQPEIHLFCARFKEQAGDIVGARAAY 512
Query: 376 IQRGKGTDSDFVESVKSIANMEKRLGNMESAFNIYKXXXXXXXXXXXXXXXPLLYIHLSR 435
+E++ ANME RLG +E AF++Y+ P+L+ SR
Sbjct: 513 QLVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSR 572
Query: 436 LKYMSTNSEDASRDVLIDGIRTLPPNKLLLEELIKFSMVHGGTKH--ITLIDTIIADALS 493
Y+++ + + +R++L+ G+ +K LLE L+ F + K I +++++ ++
Sbjct: 573 FVYLASGNSEKAREILVGGLENASLSKPLLEALLHFEAIQPQPKRVDIDFLESLVVKFIT 632
Query: 494 PRSDESQGLGTEDAEDISKLYLEFVDYCGTIHDVKKAWNRHMKLF 538
P + + E++S ++LEF++ G + +K+A +RH KLF
Sbjct: 633 PNPENPGVASATEREELSNIFLEFLNLFGDVQSIKRAEDRHAKLF 677
>Medtr6g026900.2 | cleavage stimulation factor | HC |
chr6:9094104-9083521 | 20130731
Length = 721
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 121/318 (38%), Gaps = 58/318 (18%)
Query: 53 VYDHFLSKFPLCYGYWRKYA-AHMARLCPADKVVEVFEQAVLAATYSVGMWVDYCSF--- 108
+Y+ L +P +W++Y AHMA + D + ++F + +L V +W Y F
Sbjct: 28 IYEQLLQLYPTAAKFWKQYVEAHMA-VNNDDAIKQIFSRCLLNCL-QVPLWRCYIRFIRK 85
Query: 109 --GMLAFEEPSDIRRLFKRAISFVGKDYLCHTLWDKYIQFEFS---------QQQWISLA 157
E + ++ F+ +S+VG D +W +YI F S + +
Sbjct: 86 VNDKKGAEGQEETKKAFEFMLSYVGSDIASGPVWMEYIAFLKSLPAAHPQEETHRMTVVR 145
Query: 158 HVYIQTLKFPTKKLHQY---YDSF-----KKLATFLEEGMTSLDNSPKQLQSE--SCFDG 207
VY + + PT + Q YDSF +KLA L NS + + E FD
Sbjct: 146 KVYQRAIITPTHHIEQLWKDYDSFESSVSQKLAKGLISEYQPKYNSARAVYRERKKFFDE 205
Query: 208 ------EIPMTMCCKDDEIYCIIKDMMDSSVG--MACSIAVKKYRVIGEQLYHNACELYS 259
+P T K++ + K ++ G IA RVI + C +Y
Sbjct: 206 IDWNMLAVPPTGSHKEEMQWMSWKKLLSFEKGNPQRIDIASSNKRVI---FTYEQCLMYL 262
Query: 260 KISSFEANIERHYFHVQPLDAKQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYSDY 319
HY V W+DY + G D A+K+++R L +
Sbjct: 263 ----------YHYPDV----------WYDYATWHAKAGSIDAAIKVFQRSLKALPDSEML 302
Query: 320 WMRYVDFMEAKGGREIAN 337
Y + E++G + A
Sbjct: 303 RYAYAELEESRGAIQAAK 320
>Medtr6g026900.1 | cleavage stimulation factor | HC |
chr6:9094247-9083521 | 20130731
Length = 721
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 121/318 (38%), Gaps = 58/318 (18%)
Query: 53 VYDHFLSKFPLCYGYWRKYA-AHMARLCPADKVVEVFEQAVLAATYSVGMWVDYCSF--- 108
+Y+ L +P +W++Y AHMA + D + ++F + +L V +W Y F
Sbjct: 28 IYEQLLQLYPTAAKFWKQYVEAHMA-VNNDDAIKQIFSRCLLNCL-QVPLWRCYIRFIRK 85
Query: 109 --GMLAFEEPSDIRRLFKRAISFVGKDYLCHTLWDKYIQFEFS---------QQQWISLA 157
E + ++ F+ +S+VG D +W +YI F S + +
Sbjct: 86 VNDKKGAEGQEETKKAFEFMLSYVGSDIASGPVWMEYIAFLKSLPAAHPQEETHRMTVVR 145
Query: 158 HVYIQTLKFPTKKLHQY---YDSF-----KKLATFLEEGMTSLDNSPKQLQSE--SCFDG 207
VY + + PT + Q YDSF +KLA L NS + + E FD
Sbjct: 146 KVYQRAIITPTHHIEQLWKDYDSFESSVSQKLAKGLISEYQPKYNSARAVYRERKKFFDE 205
Query: 208 ------EIPMTMCCKDDEIYCIIKDMMDSSVG--MACSIAVKKYRVIGEQLYHNACELYS 259
+P T K++ + K ++ G IA RVI + C +Y
Sbjct: 206 IDWNMLAVPPTGSHKEEMQWMSWKKLLSFEKGNPQRIDIASSNKRVI---FTYEQCLMYL 262
Query: 260 KISSFEANIERHYFHVQPLDAKQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYSDY 319
HY V W+DY + G D A+K+++R L +
Sbjct: 263 ----------YHYPDV----------WYDYATWHAKAGSIDAAIKVFQRSLKALPDSEML 302
Query: 320 WMRYVDFMEAKGGREIAN 337
Y + E++G + A
Sbjct: 303 RYAYAELEESRGAIQAAK 320