Miyakogusa Predicted Gene

Lj4g3v2628860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2628860.1 tr|Q6L4D2|Q6L4D2_ORYSJ Os05g0381400 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0088M05.8 PE=2
,43.23,4e-19,AWPM-19,AWPM-19-like; seg,NULL,CUFF.51395.1
         (160 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g068860.1 | ABA induced plasma membrane protein | HC | chr...   245   1e-65
Medtr2g049340.1 | ABA induced plasma membrane protein | HC | chr...   216   8e-57
Medtr4g117600.1 | ABA induced plasma membrane protein | HC | chr...   106   7e-24
Medtr1g094035.1 | ABA induced plasma membrane protein | HC | chr...    86   2e-17
Medtr4g117600.2 | ABA induced plasma membrane protein | HC | chr...    75   3e-14

>Medtr6g068860.1 | ABA induced plasma membrane protein | HC |
           chr6:24750337-24752005 | 20130731
          Length = 157

 Score =  245 bits (626), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 120/154 (77%), Positives = 128/154 (83%)

Query: 6   MKPIATLLLGLNFCMYVIVLGIGGWAMNRAIDQGFIIGPELQLPAHFSPIFFPMGNASTG 65
           MK +ATLLL LNFCMYVIV+GIG WAMNRAID GFIIGPEL LPAHFSPIFFPMGNASTG
Sbjct: 1   MKSVATLLLVLNFCMYVIVIGIGAWAMNRAIDHGFIIGPELNLPAHFSPIFFPMGNASTG 60

Query: 66  FFVTFALXXXXXXXXXXXXXXNHIRSWTAESLPSAASVATMAWTLTLLAMGFAWKEVELR 125
           FFVT +L               HI SWTAESLPSAAS+AT+AWTLTLLAMGFAWKE+EL+
Sbjct: 61  FFVTISLLAGVIGAASTISGVKHICSWTAESLPSAASIATLAWTLTLLAMGFAWKEIELQ 120

Query: 126 IRNARLKTMEAFLIILSATQLFYIAAIHGAAAYR 159
           IRNARLKTMEAF+IILS TQL YI AIHGAAAY 
Sbjct: 121 IRNARLKTMEAFIIILSVTQLLYIVAIHGAAAYN 154


>Medtr2g049340.1 | ABA induced plasma membrane protein | HC |
           chr2:21744400-21742691 | 20130731
          Length = 160

 Score =  216 bits (550), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 123/160 (76%), Positives = 133/160 (83%)

Query: 1   MANEQMKPIATLLLGLNFCMYVIVLGIGGWAMNRAIDQGFIIGPELQLPAHFSPIFFPMG 60
           MANEQMKPIATLLL LNFCMYVIV+ IGGWAMNRAID GF IGP   LPAHFSPI+FPMG
Sbjct: 1   MANEQMKPIATLLLALNFCMYVIVISIGGWAMNRAIDHGFEIGPGFDLPAHFSPIYFPMG 60

Query: 61  NASTGFFVTFALXXXXXXXXXXXXXXNHIRSWTAESLPSAASVATMAWTLTLLAMGFAWK 120
           NA+TGFFVTFAL              NHIRSWT+ESLPSAASVA +AW LT+LAMGF  K
Sbjct: 61  NAATGFFVTFALIAGVVGIGSLISGLNHIRSWTSESLPSAASVAAIAWALTVLAMGFGCK 120

Query: 121 EVELRIRNARLKTMEAFLIILSATQLFYIAAIHGAAAYRR 160
           E++L IRN+RLKTMEAFLIIL+ATQLFYIAAIHGAAA RR
Sbjct: 121 EIQLNIRNSRLKTMEAFLIILTATQLFYIAAIHGAAAIRR 160


>Medtr4g117600.1 | ABA induced plasma membrane protein | HC |
           chr4:48786110-48787634 | 20130731
          Length = 164

 Score =  106 bits (265), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 75/137 (54%)

Query: 21  YVIVLGIGGWAMNRAIDQGFIIGPELQLPAHFSPIFFPMGNASTGFFVTFALXXXXXXXX 80
           Y IV+ I  WAMN  I +       L  PAH  PI+FPMGN +TGFF+ F L        
Sbjct: 21  YFIVIVIASWAMNHGIQRSGEAASVLTTPAHIFPIYFPMGNMTTGFFIIFTLIAGVVGFT 80

Query: 81  XXXXXXNHIRSWTAESLPSAASVATMAWTLTLLAMGFAWKEVELRIRNARLKTMEAFLII 140
                 N+I  W A +L +AA  +   W LTLLAMGFA KE+E    ++ L+T+E   II
Sbjct: 81  TSVTGLNNIFQWNAPNLNAAAMSSLTTWALTLLAMGFACKEIERGWTDSNLRTLETITII 140

Query: 141 LSATQLFYIAAIHGAAA 157
           ++ATQL     IH  A+
Sbjct: 141 VTATQLLCTTVIHVGAS 157


>Medtr1g094035.1 | ABA induced plasma membrane protein | HC |
           chr1:42229133-42230198 | 20130731
          Length = 179

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 14/142 (9%)

Query: 13  LLGLNFCMYVIVLGIGGWAMNRAIDQGFIIGPELQLPAHFSPIFFPMGNASTGFFVTFAL 72
           LL LN  MY IVLG   W +NR     FI G        + P F   GN +T FF+TF++
Sbjct: 12  LLFLNLVMYFIVLGFASWCLNR-----FINGQT------YHPSF--GGNGATMFFLTFSI 58

Query: 73  XXXXXXXXXXXXXXNHIRSWTAESLPSAASVATMAWTLTLLAMGFAWKEVEL-RIRNARL 131
                         NH+R W ++SL SA + + +AW +T LAMG A K++ +   R  RL
Sbjct: 59  LAAVLGIVSKFMGANHLRFWRSDSLASAGATSVIAWAVTALAMGLACKQIHIGGHRGWRL 118

Query: 132 KTMEAFLIILSATQLFYIAAIH 153
           K +EAF+IIL+ TQL  +   H
Sbjct: 119 KMVEAFIIILTFTQLLCLLLTH 140


>Medtr4g117600.2 | ABA induced plasma membrane protein | HC |
           chr4:48786110-48786998 | 20130731
          Length = 120

 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 51/98 (52%)

Query: 21  YVIVLGIGGWAMNRAIDQGFIIGPELQLPAHFSPIFFPMGNASTGFFVTFALXXXXXXXX 80
           Y IV+ I  WAMN  I +       L  PAH  PI+FPMGN +TGFF+ F L        
Sbjct: 21  YFIVIVIASWAMNHGIQRSGEAASVLTTPAHIFPIYFPMGNMTTGFFIIFTLIAGVVGFT 80

Query: 81  XXXXXXNHIRSWTAESLPSAASVATMAWTLTLLAMGFA 118
                 N+I  W A +L +AA  +   W LTLLAMG A
Sbjct: 81  TSVTGLNNIFQWNAPNLNAAAMSSLTTWALTLLAMGSA 118