Miyakogusa Predicted Gene
- Lj4g3v2628750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2628750.1 tr|G7L803|G7L803_MEDTR Exonuclease OS=Medicago
truncatula GN=MTR_8g087940 PE=4 SV=1,69.17,0,seg,NULL; XPG_1,XPG
conserved site; XPGRADSUPER,DNA repair protein (XPGC)/yeast Rad;
Xeroderma pigme,CUFF.51368.1
(696 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g087940.2 | 5'-3' exonuclease family protein | HC | chr8:3... 1031 0.0
Medtr8g087940.1 | 5'-3' exonuclease family protein | HC | chr8:3... 1003 0.0
Medtr0110s0050.1 | 5'-3' exonuclease family protein | HC | scaff... 300 3e-81
Medtr1g085130.1 | flap endonuclease 1-A | HC | chr1:38000945-380... 81 3e-15
Medtr1g085130.4 | flap endonuclease 1-A | HC | chr1:38000945-380... 80 6e-15
Medtr1g085130.3 | flap endonuclease 1-A | HC | chr1:38000945-380... 80 8e-15
Medtr1g085130.2 | flap endonuclease 1-A | HC | chr1:38001007-380... 79 2e-14
Medtr7g034405.1 | DNA repair UVH3-like protein | HC | chr7:12893... 78 3e-14
Medtr7g076290.1 | flap endonuclease GEN-like protein | HC | chr7... 59 1e-08
>Medtr8g087940.2 | 5'-3' exonuclease family protein | HC |
chr8:36390120-36384591 | 20130731
Length = 721
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/695 (71%), Positives = 558/695 (80%), Gaps = 3/695 (0%)
Query: 1 MGIQGLLPQLKSIMVPIHIKELNGCSVAVDTYSWLHKGALSCSTELCKGIPTTRHIEYCM 60
MGI GLLP LKSIM+PIHIK+ +GCSVA+DTYSWLHKGALSCST+LCKGIPTTRHIEYCM
Sbjct: 1 MGIHGLLPLLKSIMIPIHIKDFHGCSVAIDTYSWLHKGALSCSTDLCKGIPTTRHIEYCM 60
Query: 61 RKVNLLRHYGVEPILVFDGGLLPMKSEQENKRARARKDNFARAIEHESDGNSTAAFHCYQ 120
+VNLLRHYGV+PILVFDGGLLPMK +QENKRAR+RK+N RA+EHE++GNSTAA+ CYQ
Sbjct: 61 HRVNLLRHYGVKPILVFDGGLLPMKGDQENKRARSRKENLERAVEHEANGNSTAAYECYQ 120
Query: 121 KAVDISPLIAHELIQVLKQENLQYIVAPYEADAQMTFLAISRQVDAVITEDSDLIPFGCP 180
KAVDISP IA ELIQVLKQEN+QY+VAPYEADAQMTFLAIS+QVDAVITEDSDLIPFGCP
Sbjct: 121 KAVDISPQIARELIQVLKQENVQYVVAPYEADAQMTFLAISKQVDAVITEDSDLIPFGCP 180
Query: 181 RIIFKMDQFGQGVQFQYSMLQNNKELSFEGFNRQMLLEMCILSGCDYLQSLPGMGLKKAH 240
RIIFKMD+FGQGVQFQYSMLQ NKEL+FEGFN+QMLLEMCILSGCDYLQSLPGMGLKKAH
Sbjct: 181 RIIFKMDKFGQGVQFQYSMLQKNKELNFEGFNKQMLLEMCILSGCDYLQSLPGMGLKKAH 240
Query: 241 TSIKRFKSYDKVLKHLRYSGVSVPPFYEESFKKAILTFQYQRVYDPINENIVHLSNVPDD 300
SIKRFKSYDKVLKHL+Y+GVSVPPFYEESF+KAILTFQYQRVYDP++ENIVHL+N+P+D
Sbjct: 241 ASIKRFKSYDKVLKHLKYNGVSVPPFYEESFRKAILTFQYQRVYDPVSENIVHLANIPED 300
Query: 301 IGDELDFLGPPMPKDIAQGIAKGDIDPITKIPFKGENLISPSAIAGTCQFKTSHSETAKK 360
IGDELDFLGPP+PKDI QGIA+GD+DPITK+PF+G+ + IAGT QFKT +SE KK
Sbjct: 301 IGDELDFLGPPLPKDIGQGIAEGDLDPITKMPFEGDKFAARLEIAGTSQFKTLNSERVKK 360
Query: 361 KIDLPVQNNLLTKYFCFASLEAKRKFIAPRVXXXXXXXXXXXXXXXXXXXXXXXXXXAAA 420
+IDLPVQ NLLTKYFCFASLEAKR+F APR AAA
Sbjct: 361 RIDLPVQKNLLTKYFCFASLEAKREFKAPRT--SPTTANQSTLISSSVNSLEHQTLEAAA 418
Query: 421 SETKNSAASIVDSENWSNDPLSNSHIENSLTTNISEFMESPHHVSMASEKR-SPEHTKLQ 479
ET NS AS VD+EN + NS+IENS T E MESP+HVSMA EK+ SP+HT L+
Sbjct: 419 RETVNSGASTVDTENCDSSLPPNSYIENSFPTKTLELMESPNHVSMAGEKKGSPDHTILR 478
Query: 480 QSRNPIHKPCLALHKEHEHTSVQDTVEPKTREATGKVIVRSRYFQHKQVEKKVCGEKQDH 539
Q R PIHKPCL LHKEHE T+V+D E KT+E KVIVRSRYFQ KQVEK C KQ+
Sbjct: 479 QPRQPIHKPCLGLHKEHELTNVEDKAEEKTKETKRKVIVRSRYFQQKQVEKNACDVKQEQ 538
Query: 540 LSSGIVIDGRQNAISDSDLCNDHLKNKDLKRKISPNDHTQNENSQPRQMHPASPPHDNGF 599
LSS IVID R+N IS DLCN HLKN DLK+K+ PND Q+EN Q R+M+P S HDNG
Sbjct: 539 LSSCIVIDERKNGISGGDLCNKHLKNDDLKKKVYPNDTIQSENLQARKMNPTSSTHDNGC 598
Query: 600 CDDKVDGPFAERSAEEEKFGTTISHLSHYSQIAEKSMDRFEXXXXXXXXXXXXXXXXLRA 659
D V GPF E SA+EEKFGT ISHL HYSQI+EKS++RF LRA
Sbjct: 599 SDHNVGGPFKENSAQEEKFGTNISHLGHYSQISEKSLERFASVISAYKYTSGSRVSGLRA 658
Query: 660 PLKDVRNTCNNRPTTVDLKQYAYVPKQRKKSRIAP 694
PLKDVRNT N RP VDL QYAYVPK K R+AP
Sbjct: 659 PLKDVRNTHNKRPAAVDLSQYAYVPKPTKTRRVAP 693
>Medtr8g087940.1 | 5'-3' exonuclease family protein | HC |
chr8:36390120-36384780 | 20130731
Length = 735
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/704 (69%), Positives = 551/704 (78%), Gaps = 15/704 (2%)
Query: 1 MGIQGLLPQLKSIMVPIHIKELNGCSVAVDTYSWLHKGALSCSTELCKGIPTTRHIEYCM 60
MGI GLLP LKSIM+PIHIK+ +GCSVA+DTYSWLHKGALSCST+LCKGIPTTRHIEYCM
Sbjct: 1 MGIHGLLPLLKSIMIPIHIKDFHGCSVAIDTYSWLHKGALSCSTDLCKGIPTTRHIEYCM 60
Query: 61 RKVNLLRHYGVEPILVFDGGLLPMKSEQENKRARARKDNFARAIEHESDGNSTAAFHCYQ 120
+VNLLRHYGV+PILVFDGGLLPMK +QENKRAR+RK+N RA+EHE++GNSTAA+ CYQ
Sbjct: 61 HRVNLLRHYGVKPILVFDGGLLPMKGDQENKRARSRKENLERAVEHEANGNSTAAYECYQ 120
Query: 121 KAVDISPLIAHELIQVLKQENLQYIVAPYEADAQMTFLAISRQVDAVITEDSDLIPFGCP 180
KAVDISP IA ELIQVLKQEN+QY+VAPYEADAQMTFLAIS+QVDAVITEDSDLIPFGCP
Sbjct: 121 KAVDISPQIARELIQVLKQENVQYVVAPYEADAQMTFLAISKQVDAVITEDSDLIPFGCP 180
Query: 181 RIIFKMDQFGQGVQFQYSMLQNNKELSFEGFNRQMLLEMCILSGCDYLQSLPGMGLKKAH 240
RIIFKMD+FGQGVQFQYSMLQ NKEL+FEGFN+QMLLEMCILSGCDYLQSLPGMGLKKAH
Sbjct: 181 RIIFKMDKFGQGVQFQYSMLQKNKELNFEGFNKQMLLEMCILSGCDYLQSLPGMGLKKAH 240
Query: 241 TSIKRFKSYDKVLKHLRYSGVSVPPFYEESFKKAILTFQYQRVYDPINENIVHLSNVPDD 300
SIKRFKSYDKVLKHL+Y+GVSVPPFYEESF+KAILTFQYQRVYDP++ENIVHL+N+P+D
Sbjct: 241 ASIKRFKSYDKVLKHLKYNGVSVPPFYEESFRKAILTFQYQRVYDPVSENIVHLANIPED 300
Query: 301 IGDELDFLG----------PPMPKDIAQGIAKGDIDPITKIPFKGENLISPSAIAGTCQF 350
IGDELDFL P+PKDI QGIA+GD+DPITK+PF+G+ + IAGT QF
Sbjct: 301 IGDELDFLDLIQNNTLTRYTPLPKDIGQGIAEGDLDPITKMPFEGDKFAARLEIAGTSQF 360
Query: 351 KTSHSETAKKKIDLPVQNNLLTKYFCFASLEAKRKFIAPRVXXXXXXXXXXXXXXXXXXX 410
KT +SE KK+IDLPVQ NLLTKYFCFASLEAKR+F APR
Sbjct: 361 KTLNSERVKKRIDLPVQKNLLTKYFCFASLEAKREFKAPRT--SPTTANQSTLISSSVNS 418
Query: 411 XXXXXXXAAASETKNSAASIVDSENWSNDPLSNSHIENSLTTNISEFMESPHHVSMASEK 470
AAA ET NS AS VD+EN + NS+IENS T E MESP+H +K
Sbjct: 419 LEHQTLEAAARETVNSGASTVDTENCDSSLPPNSYIENSFPTKTLELMESPNH---GEKK 475
Query: 471 RSPEHTKLQQSRNPIHKPCLALHKEHEHTSVQDTVEPKTREATGKVIVRSRYFQHKQVEK 530
SP+HT L+Q R PIHKPCL LHKEHE T+V+D E KT+E KVIVRSRYFQ KQVEK
Sbjct: 476 GSPDHTILRQPRQPIHKPCLGLHKEHELTNVEDKAEEKTKETKRKVIVRSRYFQQKQVEK 535
Query: 531 KVCGEKQDHLSSGIVIDGRQNAISDSDLCNDHLKNKDLKRKISPNDHTQNENSQPRQMHP 590
C KQ+ LSS IVID R+N IS DLCN HLKN DLK+K+ PND Q+EN Q R+M+P
Sbjct: 536 NACDVKQEQLSSCIVIDERKNGISGGDLCNKHLKNDDLKKKVYPNDTIQSENLQARKMNP 595
Query: 591 ASPPHDNGFCDDKVDGPFAERSAEEEKFGTTISHLSHYSQIAEKSMDRFEXXXXXXXXXX 650
S HDNG D V GPF E SA+EEKFGT ISHL HYSQI+EKS++RF
Sbjct: 596 TSSTHDNGCSDHNVGGPFKENSAQEEKFGTNISHLGHYSQISEKSLERFASVISAYKYTS 655
Query: 651 XXXXXXLRAPLKDVRNTCNNRPTTVDLKQYAYVPKQRKKSRIAP 694
LRAPLKDVRNT N RP VDL QYAYVPK K R+AP
Sbjct: 656 GSRVSGLRAPLKDVRNTHNKRPAAVDLSQYAYVPKPTKTRRVAP 699
>Medtr0110s0050.1 | 5'-3' exonuclease family protein | HC |
scaffold0110:37420-32210 | 20130731
Length = 574
Score = 300 bits (769), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 226/347 (65%), Gaps = 14/347 (4%)
Query: 1 MGIQGLLPQLKSIMVPIHIKELNGCSVAVDTYSWLHKGALSCSTELCKGIPT---TRHIE 57
MGI+ LL +K + PIHIK G V +D YSWLHKGA SCS ELC + R+IE
Sbjct: 1 MGIKDLLRFMKPYVEPIHIKNYAGKRVGIDAYSWLHKGAYSCSMELCLDSNSERKLRYIE 60
Query: 58 YCMRKVNLLRHYGVEPILVFDGGLLPMKSEQENKRARARKDNFARAIEHESDGNSTAAFH 117
Y M +VNLLR+Y V P++VFDGG +P K+ E +R + R N A+ +GN AA
Sbjct: 61 YFMHRVNLLRYYNVTPVVVFDGGNVPCKAATEKERNKKRNTNRELAMAKLKEGNVNAASE 120
Query: 118 CYQKAVDISPLIAHELIQVLKQENLQYIVAPYEADAQMTFLAISRQ----VDAVITEDSD 173
+Q+AV+I+P++AH+LIQ LK EN++++VAPYEADAQ+ +L+ + AVITEDSD
Sbjct: 121 LFQRAVNITPVMAHKLIQTLKSENIEFVVAPYEADAQLAYLSNLETEKGGIAAVITEDSD 180
Query: 174 LIPFGCPRIIFKMDQFGQG--VQFQYSMLQNNKELSFEGFNRQMLLEMCILSGCDYLQSL 231
L+ +GCP +IFKMD+ G G ++ + + + SF+ FN ++ MC+L+GCD+L S+
Sbjct: 181 LLTYGCPAVIFKMDREGNGERIELEKVFSAESCKPSFQSFNMKLFTGMCVLAGCDFLPSV 240
Query: 232 PGMGLKKAHTSIKRFKSYDKVLKHLRYS-GVSVPPFYEESFKKAILTFQYQRVYDPINEN 290
PG+G+ +AH + ++++ D++L L+ G +P Y +SFK A+ F++ R+YD +
Sbjct: 241 PGIGVARAHALVSKYRNIDRILSVLKLEKGDQMPEDYAKSFKDALAVFEHARIYDINTKE 300
Query: 291 IVHLSNVP----DDIGDELDFLGPPMPKDIAQGIAKGDIDPITKIPF 333
+ H+ +P + + ++L+FLGP +P I + IA+G+++P TK F
Sbjct: 301 LKHMKPLPESFLESLDEDLNFLGPEIPSTIVKAIAEGNLNPSTKEAF 347
>Medtr1g085130.1 | flap endonuclease 1-A | HC |
chr1:38000945-38008617 | 20130731
Length = 384
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 1 MGIQGLLPQLKSIMVPIHIKE-----LNGCSVAVDT----YSWLHKGALSCSTELC-KGI 50
MGI+GL +L + P +KE G +AVD Y +L S + L +
Sbjct: 1 MGIKGL-TKLLADNAPKSMKENKFESYFGRKIAVDASMSIYQFLIVVGRSGTEMLTNEAG 59
Query: 51 PTTRHIEYCMRKVNLLRHYGVEPILVFDGGLLPMKSEQENKRARARKDNFARAIEHESDG 110
T H++ + L G++P+ VFDG MK+++ KR R + A E
Sbjct: 60 EVTSHLQGMFARTIRLLEAGMKPVYVFDGKPPEMKNQELKKRLSKRAEATAGLTEALEAD 119
Query: 111 NSTAAFHCYQKAVDISPLIAHELIQVLKQENLQYIVAPYEADAQMTFLAISRQVDAVITE 170
N ++ V ++ + ++L+ + + AP EA+AQ L + +V AV +E
Sbjct: 120 NKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASE 179
Query: 171 DSDLIPFGCPRII-FKMDQFGQGV---QFQYSMLQNNKELSFEGFNRQMLLEMCILSGCD 226
D D + FG P+ + MD + + +F + + +L+ + F +++CILSGCD
Sbjct: 180 DMDSLTFGAPKFLRHLMDPSSKKIPVMEFDVAKILEELDLTMDQF-----IDLCILSGCD 234
Query: 227 YLQSLPGMGLKKAHTSIKRFKSYDKVLKHLRYSGVSVP---PFYE 268
Y ++ G+G A I++ S +K+L+++ VP P+ E
Sbjct: 235 YCDNIRGIGGMTALKLIRQHGSIEKILENISKERYQVPDDWPYQE 279
>Medtr1g085130.4 | flap endonuclease 1-A | HC |
chr1:38000945-38008113 | 20130731
Length = 383
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 1 MGIQGLLPQLKSIMVPIHIKE-----LNGCSVAVDT----YSWLHKGALSCSTELC-KGI 50
MGI+GL +L + P +KE G +AVD Y +L S + L +
Sbjct: 1 MGIKGL-TKLLADNAPKSMKENKFESYFGRKIAVDASMSIYQFLIVVGRSGTEMLTNEAG 59
Query: 51 PTTRHIEYCMRKVNLLRHYGVEPILVFDGGLLPMKSEQENKRARARKDNFARAIEHESDG 110
T H++ + L G++P+ VFDG MK+++ KR R + A E
Sbjct: 60 EVTSHLQGMFARTIRLLEAGMKPVYVFDGKPPEMKNQELKKRLSKRAEATAGLTEALEAD 119
Query: 111 NSTAAFHCYQKAVDISPLIAHELIQVLKQENLQYIVAPYEADAQMTFLAISRQVDAVITE 170
N ++ V ++ + ++L+ + + AP EA+AQ L + +V AV +E
Sbjct: 120 NKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASE 179
Query: 171 DSDLIPFGCPRII-FKMDQFGQGV---QFQYSMLQNNKELSFEGFNRQMLLEMCILSGCD 226
D D + FG P+ + MD + + +F + + +L+ + F +++CILSGCD
Sbjct: 180 DMDSLTFGAPKFLRHLMDPSSKKIPVMEFDVAKILEELDLTMDQF-----IDLCILSGCD 234
Query: 227 YLQSLPGMGLKKAHTSIKRFKSYDKVLKHLRYSGVSVP 264
Y ++ G+G A I++ S +K+L+++ VP
Sbjct: 235 YCDNIRGIGGMTALKLIRQHGSIEKILENISKERYQVP 272
>Medtr1g085130.3 | flap endonuclease 1-A | HC |
chr1:38000945-38008609 | 20130731
Length = 416
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 1 MGIQGLLPQLKSIMVPIHIKE-----LNGCSVAVDT----YSWLHKGALSCSTELC-KGI 50
MGI+GL +L + P +KE G +AVD Y +L S + L +
Sbjct: 1 MGIKGL-TKLLADNAPKSMKENKFESYFGRKIAVDASMSIYQFLIVVGRSGTEMLTNEAG 59
Query: 51 PTTRHIEYCMRKVNLLRHYGVEPILVFDGGLLPMKSEQENKRARARKDNFARAIEHESDG 110
T H++ + L G++P+ VFDG MK+++ KR R + A E
Sbjct: 60 EVTSHLQGMFARTIRLLEAGMKPVYVFDGKPPEMKNQELKKRLSKRAEATAGLTEALEAD 119
Query: 111 NSTAAFHCYQKAVDISPLIAHELIQVLKQENLQYIVAPYEADAQMTFLAISRQVDAVITE 170
N ++ V ++ + ++L+ + + AP EA+AQ L + +V AV +E
Sbjct: 120 NKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASE 179
Query: 171 DSDLIPFGCPRII-FKMDQFGQGV---QFQYSMLQNNKELSFEGFNRQMLLEMCILSGCD 226
D D + FG P+ + MD + + +F + + +L+ + F +++CILSGCD
Sbjct: 180 DMDSLTFGAPKFLRHLMDPSSKKIPVMEFDVAKILEELDLTMDQF-----IDLCILSGCD 234
Query: 227 YLQSLPGMGLKKAHTSIKRFKSYDKVLKHLRYSGVSVP 264
Y ++ G+G A I++ S +K+L+++ VP
Sbjct: 235 YCDNIRGIGGMTALKLIRQHGSIEKILENISKERYQVP 272
>Medtr1g085130.2 | flap endonuclease 1-A | HC |
chr1:38001007-38008524 | 20130731
Length = 369
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 9/217 (4%)
Query: 52 TTRHIEYCMRKVNLLRHYGVEPILVFDGGLLPMKSEQENKRARARKDNFARAIEHESDGN 111
T H++ + L G++P+ VFDG MK+++ KR R + A E N
Sbjct: 46 VTSHLQGMFARTIRLLEAGMKPVYVFDGKPPEMKNQELKKRLSKRAEATAGLTEALEADN 105
Query: 112 STAAFHCYQKAVDISPLIAHELIQVLKQENLQYIVAPYEADAQMTFLAISRQVDAVITED 171
++ V ++ + ++L+ + + AP EA+AQ L + +V AV +ED
Sbjct: 106 KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAPSEAEAQCAALCKAGKVYAVASED 165
Query: 172 SDLIPFGCPRII-FKMDQFGQGV---QFQYSMLQNNKELSFEGFNRQMLLEMCILSGCDY 227
D + FG P+ + MD + + +F + + +L+ + F +++CILSGCDY
Sbjct: 166 MDSLTFGAPKFLRHLMDPSSKKIPVMEFDVAKILEELDLTMDQF-----IDLCILSGCDY 220
Query: 228 LQSLPGMGLKKAHTSIKRFKSYDKVLKHLRYSGVSVP 264
++ G+G A I++ S +K+L+++ VP
Sbjct: 221 CDNIRGIGGMTALKLIRQHGSIEKILENISKERYQVP 257
>Medtr7g034405.1 | DNA repair UVH3-like protein | HC |
chr7:12893024-12880077 | 20130731
Length = 1673
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 131 HELIQVLKQENLQYIVAPYEADAQMTFLAISRQVDAVITEDSDLIPFGCPRIIFKMDQFG 190
EL+Q+ L YI+AP EA+AQ +L +S+ VD V+T+DSD+ FG R ++K
Sbjct: 1033 QELLQMF---GLPYIIAPMEAEAQCAYLELSKLVDGVVTDDSDVFLFGA-RSVYKNIFDD 1088
Query: 191 QGVQFQYSMLQNNKELSFEGFNRQMLLEMCILSGCDYLQSLPGMGLKKAHTSIKRFKSYD 250
+ Y M KEL G NR+ L+ M +L G DY + + G+G+ A + F D
Sbjct: 1089 RKYVETYFMEDVEKEL---GLNREKLIRMALLLGSDYTEGVSGIGIVNAIEVLNAFPEED 1145
Query: 251 KVLKHLRY 258
+LK ++
Sbjct: 1146 GLLKFRQW 1153
>Medtr7g076290.1 | flap endonuclease GEN-like protein | HC |
chr7:28709723-28704777 | 20130731
Length = 612
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 101/239 (42%), Gaps = 24/239 (10%)
Query: 27 VAVDTYSWLHKGALSCSTELCKGIPTTRHIEYCMRKVNLLRHYGVEPILVFDGGLLPMKS 86
VA+D W+ + + T + K P R + R +NL +G P+ V DG P+KS
Sbjct: 28 VAIDLSFWIVQHNNAIKTHVKK--PHLRLTFF--RTINLFSKFGAFPVFVVDGTPSPLKS 83
Query: 87 EQENKR----ARARKDNFARAIEHESDGNSTAAFHCYQKAVDISPLIAHELIQVLKQENL 142
+ R + + A E S G ++ C Q+ V+++ L+ I VLK
Sbjct: 84 QARIARFFRSSGIESTSLPVAEEGVSAGRNSTFSRCVQECVELAKLLG---IPVLK---- 136
Query: 143 QYIVAPYEADAQMTFLAISRQVDAVITEDSDLIPFGCPRIIFKMDQFGQGVQFQYSMLQN 202
A EA+A L VDA IT DSD FG II + Y+M
Sbjct: 137 ----AKGEAEALCAQLNSEGHVDACITPDSDAFLFGAKCIIKSFSPNSKEPFECYNMSDI 192
Query: 203 NKELSFEGFNRQMLLEMCILSGCDY-LQSLPGMGLKKAHTSIKRFKSYDKVLKHLRYSG 260
L G R+ L+ + +L G D+ L + G+G+ A ++ F D +L L G
Sbjct: 193 EAGL---GLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFVQAFGE-DDILNRLHEIG 247