Miyakogusa Predicted Gene

Lj4g3v2618560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2618560.1 tr|A9SN34|A9SN34_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,34.75,3e-18,seg,NULL; BERNARDINELLI-SEIP CONGENITAL
LIPODYSTROPHY 2 HOMOLOG (BSCL2 PROTEIN),NULL;
Seipin,Adipose,CUFF.51351.1
         (555 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g087730.1 | adipose-regulatory protein (seipin), putative ...   578   e-165
Medtr2g017670.1 | adipose-regulatory protein (seipin), putative ...   475   e-134
Medtr7g080030.1 | adipose-regulatory protein (seipin), putative ...   155   1e-37

>Medtr8g087730.1 | adipose-regulatory protein (seipin), putative |
           HC | chr8:36273922-36270969 | 20130731
          Length = 504

 Score =  578 bits (1489), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 315/576 (54%), Positives = 365/576 (63%), Gaps = 93/576 (16%)

Query: 1   MDPGPQNQHDDVFFDAFHHCPFHHCSAVADNS-------------PESSATASDXXXXXX 47
           MD  PQ   DD+FFDAFH CPFHHCSA  D++             P++  ++        
Sbjct: 1   MDTNPQK--DDIFFDAFHKCPFHHCSATDDHTMPESPPSSSGPVHPDTPPSSPSSATIRR 58

Query: 48  XXXXXXXXXXXXXXAMQSTHTDSFSDSIDTATTSLQNDPNLSILKENENSPKKIDSDEAK 107
                          + S+   +  D I +         N SILKE+EN P+K      K
Sbjct: 59  RSIRRRSPENELSETISSSTNSTSGDKIKSQ--------NPSILKESENFPEK-----GK 105

Query: 108 IRSFEEGNEESTITTASHDEGPGDSADSVAAETGGSPEKIDSDEEKLRSIPPPSVVTEER 167
           +   EE NEEST+TTA+HDE  GDSADS+                               
Sbjct: 106 VE--EERNEESTLTTATHDEPFGDSADSLG------------------------------ 133

Query: 168 NEESTITTASHDDEGPGDSADSVAADHGDSPSSSLEFVAGLVIRVIMMQIKVFIFFVKSP 227
                       ++ P +S D               +  GLVIR IM Q++VFI  VK P
Sbjct: 134 ----------ELNDSPSNSLD---------------YATGLVIRAIMFQVRVFIMLVKCP 168

Query: 228 VLLLFHGCMFFVDPFGTIRKGKSFFMEILDRVWGCV------SAQGLFSEQNSFWNVAFR 281
           +LL+ + CMFFVDPFGTIRKG+ F M +LDRV  CV      SA G F+E  SFWNVAFR
Sbjct: 169 ILLMLYTCMFFVDPFGTIRKGRVFSMWVLDRVRYCVCEFIGPSALGWFNEHKSFWNVAFR 228

Query: 282 CGWGFLWSIYVCCIXXXXXXXXXXXXXXXMKYLVEKPLQMKQVLNFDFTKQSPVAFVPVI 341
           CGWGFLWSIYVCCI               +K LVEKP QMKQVLNFD+TK SPVAFVP+I
Sbjct: 229 CGWGFLWSIYVCCILFTLLVSALVFSGFLVKGLVEKPFQMKQVLNFDYTKHSPVAFVPII 288

Query: 342 SCAGVGGGD--DPENDLAVGKWMSRRVIPPKQKVQVTVALLVPESEYNTHLGIFQVRVDF 399
           SC+GVGG    D    + V +W+++RVIP KQKVQ+TV+LLVPES YNT LG+FQ+RVDF
Sbjct: 289 SCSGVGGDRRFDESGGIGVDRWVNKRVIPSKQKVQLTVSLLVPESGYNTKLGVFQIRVDF 348

Query: 400 LSYEGKTIASSSQPCMLKFRSEPIRLITTFLKIVPLVTGYGSETQTLKAKMRGFVEGDIP 459
           LS  GKTI SS QPCML+FRSEPIRLITTFLKIVPL+TGY SETQTL AKM  FVEGDIP
Sbjct: 349 LSSNGKTIGSSRQPCMLRFRSEPIRLITTFLKIVPLLTGYISETQTLDAKMSDFVEGDIP 408

Query: 460 TSCLKVTLEQRAEYLPGAGIPQMYDSSIIVESELPFFKRIIWHWKMSIFIWITMMAFMME 519
           TSCLKVTLEQRAEYLPGAGIPQ+YDSSI VESELP  KRI+W+WKMS+FIWI MMAF+ E
Sbjct: 409 TSCLKVTLEQRAEYLPGAGIPQIYDSSIFVESELPLIKRILWYWKMSLFIWIAMMAFVTE 468

Query: 520 LLFVLVCCWPIIIPRTRQRSGSARGDGTQNNLQPPS 555
           LLFVLVCCWP+IIPRTRQRSGSA    TQNNLQ PS
Sbjct: 469 LLFVLVCCWPMIIPRTRQRSGSACSTSTQNNLQAPS 504


>Medtr2g017670.1 | adipose-regulatory protein (seipin), putative |
           HC | chr2:5420111-5417431 | 20130731
          Length = 508

 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/409 (58%), Positives = 286/409 (69%), Gaps = 11/409 (2%)

Query: 152 EKLRSIPPPSV-VTEERNEESTITTASHDDEGPGDSADSVAADHGDSPSSSLEFVAGLVI 210
           EK  S  PPS+   EE NEESTITTA++DD    DS DSV+  H DS SS LE +AGL+I
Sbjct: 98  EKQPSTSPPSIHAIEENNEESTITTATNDDLA-SDSIDSVSRLH-DSSSSFLELIAGLII 155

Query: 211 RVIMMQIKVFIFFVKSPVLLLFHGCMFFVDPFGTIRKGKSFFMEILDRVWGCV------S 264
             +  QIK+   F+  P+  +F  C+FF+DPFG  + GK     I+ R+W  V       
Sbjct: 156 NALEFQIKLIFMFITYPLFFMFRCCLFFMDPFGIRKLGKDIIFGIMLRIWSVVFGYIEPY 215

Query: 265 AQGLFSEQNSFWNVAFRCGWGFLWSIYVCCIXXXXXXXXXXXXXXXMKYLVEKPLQMKQV 324
            + L+    S W+V  R  WG LWSIYVCC+               +KY VEKP++M +V
Sbjct: 216 VRKLYKGNESIWSVMSRFVWGILWSIYVCCVLVGLLVSSFVFSGILIKYFVEKPIRMNEV 275

Query: 325 LNFDFTKQSPVAFVPVISCAGVGGGDDPENDLAVGK--WMSRRVIPPKQKVQVTVALLVP 382
           LNFD+TK SPVA+VP+ISC GV  G D E    VGK   M  RVIP + KVQVTV+L VP
Sbjct: 276 LNFDYTKLSPVAYVPIISCDGVVKGKDYEGGFEVGKGMMMGERVIPTRHKVQVTVSLRVP 335

Query: 383 ESEYNTHLGIFQVRVDFLSYEGKTIASSSQPCMLKFRSEPIRLITTFLKIVPLVTGYGSE 442
           ES YN +LG+FQ RVDFL + GKTIAS SQPCML++RSEPI LI TFLKI PL+TGY SE
Sbjct: 336 ESGYNRNLGVFQARVDFLLFNGKTIASLSQPCMLRYRSEPIHLIMTFLKIAPLITGYTSE 395

Query: 443 TQTLKAKMRGFVEGDIPTSCLKVTLEQRAEYLPGAGIPQMYDSSIIVESELPFFKRIIWH 502
           TQ L  KMRGFVEG+IPTSCLKVTLEQR EY PGAGIP++YD+S++VESELPFFK+IIWH
Sbjct: 396 TQILNVKMRGFVEGNIPTSCLKVTLEQRPEYQPGAGIPEIYDASLVVESELPFFKKIIWH 455

Query: 503 WKMSIFIWITMMAFMMELLFVLVCCWPIIIPRTRQRSGSARGDGTQNNL 551
           WK+SIFIWITMM F+ EL+FVLV C PIIIP TRQR  SAR   T N+L
Sbjct: 456 WKLSIFIWITMMTFLTELIFVLVFCRPIIIPSTRQRVASARSPATSNSL 504


>Medtr7g080030.1 | adipose-regulatory protein (seipin), putative |
           HC | chr7:30417214-30415274 | 20130731
          Length = 400

 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 138/263 (52%), Gaps = 12/263 (4%)

Query: 281 RCGWGFLWSIYVCCIXXXXXXXXXXXXXXXMKYLVEKPLQMKQVLNFDFTKQSPVAFVPV 340
           + G  FL + YVC I               +++ VE+P+ + + L FD+T   P A    
Sbjct: 64  KLGLCFLSAAYVCMILFFVLILASVVGVGLVRFWVEEPVIVNESLYFDYTDAHPTAVFSF 123

Query: 341 ISCAGVGGGDDPENDLAVGKWMSRRVIPPKQKVQVTVALLVPESEYNTHLGIFQVRVDFL 400
                   G   +  + V         P      V+++LL+PES++N  LG+FQ+  + L
Sbjct: 124 NGGVSAAWGYIKKKHIRV---------PVGHTFSVSLSLLMPESDFNRELGVFQLTAELL 174

Query: 401 SYEGKTIASSSQPCMLKFRSEPIRLITTFLKIVPLVTGYGSETQTLKAKMRGFVEGDIPT 460
           S  G  IA SS PCML+FRS PIRL  T +  VPLV G  +ETQ +  ++    E +  T
Sbjct: 175 SVNGNVIAKSSHPCMLRFRSSPIRLARTVMMGVPLVLGISAETQKINVEILRHKEQNQRT 234

Query: 461 SCLKVTLEQRAEYLPGAGIPQMYDSSIIVESELPFFKRIIWHWKMSIFIWITMMAFMMEL 520
           + ++VTL  RA     + +PQ+Y++ I++ S LP+ K +I +WK + ++W+++  +++ L
Sbjct: 235 NAIRVTLHPRA---GTSSLPQLYEAEIVINSHLPWAKELIRNWKWTFYVWVSLYVYIVLL 291

Query: 521 LFVLVCCWPIIIPRTRQRSGSAR 543
           + +L C  P+I   T++     R
Sbjct: 292 MLLLYCYRPLIFLVTQETFSEQR 314