Miyakogusa Predicted Gene

Lj4g3v2606080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2606080.1 tr|B9MTA3|B9MTA3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_675990 PE=4
SV=1,41.22,4e-18,seg,NULL; DUF1685,Protein of unknown function
DUF1685,CUFF.51317.1
         (248 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g086820.1 | DUF1685 family protein | HC | chr8:35969363-35...   252   2e-67
Medtr2g016760.1 | DUF1685 family protein | LC | chr2:5183911-518...   221   3e-58
Medtr2g083910.1 | DUF1685 family protein | HC | chr2:35218811-35...   176   2e-44
Medtr2g083910.2 | DUF1685 family protein | HC | chr2:35218811-35...   172   3e-43
Medtr4g080340.1 | DUF1685 family protein | HC | chr4:31166162-31...   142   4e-34
Medtr2g078620.1 | hypothetical protein | HC | chr2:32817930-3281...    72   5e-13

>Medtr8g086820.1 | DUF1685 family protein | HC |
           chr8:35969363-35968348 | 20130731
          Length = 242

 Score =  252 bits (644), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/254 (59%), Positives = 170/254 (66%), Gaps = 18/254 (7%)

Query: 1   MEAEHVMNLFDSFWLDQNILXXXXXXXXXXXXAENVENQVVKESSDSEV----PKLHRIR 56
           ME E ++ LFDSFW   NIL            +E    Q +K+S ++E     PKL RIR
Sbjct: 1   MEHESILKLFDSFWFQFNILNRNTTSSVTSTCSE----QNLKDSQNNETSYEGPKLTRIR 56

Query: 57  TGHTRSMSDQSIATSFNHESLSPNSVL--LAPKLQTIFSGKEVVDSEAEETPVVQHHEVL 114
           T H RSMSDQSIA  FNH+SLSP+SVL  +  KLQTI  GKEV DSE E   V    + L
Sbjct: 57  TVHNRSMSDQSIAC-FNHDSLSPDSVLNIIPSKLQTILXGKEVTDSEDENNLV--QTQTL 113

Query: 115 LSEKNNNGNSTSCEKKKKNRGSKSLSDLEFEELKGFMDLGFVFSLEDKNSSLASIIPGLQ 174
           L +KNNN N       KK R SKSLSDLEFEELKGFMDLGFVFS EDK+SSL  IIPGLQ
Sbjct: 114 LPKKNNNINKVV----KKKRESKSLSDLEFEELKGFMDLGFVFSEEDKDSSLVEIIPGLQ 169

Query: 175 RLGKKXXXXXXXXXXXDSNESLVPRPYLSEAWEFHGKRKKENPLMNWKVPSLKNEIDMKD 234
           RLGKK             +ES+V RPYLSEAWE +  RKKE PL+NWKVP++ NEIDMK+
Sbjct: 170 RLGKKNEEEEEEEEDV-YDESVVQRPYLSEAWEVYDWRKKEKPLVNWKVPAMNNEIDMKN 228

Query: 235 SLRLWAHTVASTVR 248
           SLRLWA TVASTVR
Sbjct: 229 SLRLWAQTVASTVR 242


>Medtr2g016760.1 | DUF1685 family protein | LC |
           chr2:5183911-5182271 | 20130731
          Length = 389

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/248 (50%), Positives = 151/248 (60%), Gaps = 19/248 (7%)

Query: 1   MEAEHVMNLFDSFWLDQNILXXXXXXXXXXXXAENVENQVVKESSDSEVPKLHRIRTGHT 60
           MEAE +  LFD+ W    IL             EN  +Q+       E   L RI+T HT
Sbjct: 1   MEAEEIFKLFDTCWFGFQILKEYPSSSISTISHENQHHQI------QEKLTLSRIKTKHT 54

Query: 61  RSMSDQ-SIATSFNHESLSPNSVLLAPKLQTIFSGKEVVDSEAEETPVVQHHEVLLSEKN 119
           RS+SDQ +  TSF H+S+SPNSVL  P+LQTI SGK+V D   E    +Q     +  KN
Sbjct: 55  RSISDQLNSMTSFKHDSMSPNSVLFQPQLQTILSGKDVTDFNTEAEKQIQLQLQAVPNKN 114

Query: 120 NNGNSTSCEKKKKNRGSKSLSDLEFEELKGFMDLGFVFSLEDKNSSLASIIPGLQRLGKK 179
              N       ++  GSKSLSDLEFEE+KGFMDLGFVFS EDK++SL SIIPGLQRLGK 
Sbjct: 115 IIRNG------RRKSGSKSLSDLEFEEVKGFMDLGFVFSEEDKDTSLVSIIPGLQRLGKN 168

Query: 180 XXXXXXXXXXXDSNESLVPRPYLSEAWEFHGKRKKENPLMNWKVPSLKNEIDMKDSLRLW 239
                       S+ S + RPYLSEAWE   +RKKE PLM WK+P+  NE+DMK SL+ W
Sbjct: 169 GEEEDV------SDVSAIQRPYLSEAWEDQKRRKKEKPLMKWKIPAPTNEVDMKYSLKCW 222

Query: 240 AHTVASTV 247
           A TVASTV
Sbjct: 223 AQTVASTV 230


>Medtr2g083910.1 | DUF1685 family protein | HC |
           chr2:35218811-35220688 | 20130731
          Length = 233

 Score =  176 bits (445), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/261 (41%), Positives = 148/261 (56%), Gaps = 41/261 (15%)

Query: 1   MEAEHVMNLFDSFWLDQNILXXXXXXXXXXXXAENVENQVVKESSDSEVPKLH------- 53
           M AEHV+ LFD  W + +I                +++     +S S+V +LH       
Sbjct: 1   MAAEHVLKLFDINWFETSIFTNNKKPSSPLHSTTLLDDS----TSMSQVEELHFLDTKLL 56

Query: 54  RIRTGHTRSMSDQSIATSFNH--ESLSPNSVLLAPKLQTIFSGKEV----VDSEAEETPV 107
           RI T   RS SD+++ T      +SLSPNSVL + KL+ I SGKEV    ++ E  +T  
Sbjct: 57  RIPTLQVRSFSDENLGTKIGSFSDSLSPNSVLTSQKLKPIISGKEVEEFTLEKEVTDTKK 116

Query: 108 VQHHEVLLSEKNNNGNSTSCEKKKKNRGSKSLSDLEFEELKGFMDLGFVFSLEDKNSSLA 167
           V H             +     +K  + ++SLS+LEF+ELKGFMDLGFVFS EDK+S L 
Sbjct: 117 VSHR------------THRTRLRKGRKTARSLSELEFKELKGFMDLGFVFSEEDKDSGLV 164

Query: 168 SIIPGLQRLGKKXXXXXXXXXXXDSNESLVPRPYLSEAWEFHGKRKKENPLMNWKVPSLK 227
           S+IPGL +               + +ES++ RPYLSEAW    ++K  NPL+NW+VP+L 
Sbjct: 165 SLIPGLSK------------NQHNVDESVISRPYLSEAWGVIKQKKVVNPLLNWRVPTLG 212

Query: 228 NEIDMKDSLRLWAHTVASTVR 248
           NEIDMKD+L+ WAHTVAS VR
Sbjct: 213 NEIDMKDNLKFWAHTVASIVR 233


>Medtr2g083910.2 | DUF1685 family protein | HC |
           chr2:35218811-35220634 | 20130731
          Length = 261

 Score =  172 bits (435), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/258 (41%), Positives = 146/258 (56%), Gaps = 41/258 (15%)

Query: 1   MEAEHVMNLFDSFWLDQNILXXXXXXXXXXXXAENVENQVVKESSDSEVPKLH------- 53
           M AEHV+ LFD  W + +I                +++     +S S+V +LH       
Sbjct: 1   MAAEHVLKLFDINWFETSIFTNNKKPSSPLHSTTLLDDS----TSMSQVEELHFLDTKLL 56

Query: 54  RIRTGHTRSMSDQSIATSFNH--ESLSPNSVLLAPKLQTIFSGKEV----VDSEAEETPV 107
           RI T   RS SD+++ T      +SLSPNSVL + KL+ I SGKEV    ++ E  +T  
Sbjct: 57  RIPTLQVRSFSDENLGTKIGSFSDSLSPNSVLTSQKLKPIISGKEVEEFTLEKEVTDTKK 116

Query: 108 VQHHEVLLSEKNNNGNSTSCEKKKKNRGSKSLSDLEFEELKGFMDLGFVFSLEDKNSSLA 167
           V H             +     +K  + ++SLS+LEF+ELKGFMDLGFVFS EDK+S L 
Sbjct: 117 VSHR------------THRTRLRKGRKTARSLSELEFKELKGFMDLGFVFSEEDKDSGLV 164

Query: 168 SIIPGLQRLGKKXXXXXXXXXXXDSNESLVPRPYLSEAWEFHGKRKKENPLMNWKVPSLK 227
           S+IPGL +               + +ES++ RPYLSEAW    ++K  NPL+NW+VP+L 
Sbjct: 165 SLIPGLSK------------NQHNVDESVISRPYLSEAWGVIKQKKVVNPLLNWRVPTLG 212

Query: 228 NEIDMKDSLRLWAHTVAS 245
           NEIDMKD+L+ WAHTVAS
Sbjct: 213 NEIDMKDNLKFWAHTVAS 230


>Medtr4g080340.1 | DUF1685 family protein | HC |
           chr4:31166162-31167125 | 20130731
          Length = 239

 Score =  142 bits (357), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 135/261 (51%), Gaps = 35/261 (13%)

Query: 1   MEAEHVMNLFDSFWLDQNILXXXXXXXXXXXXAENVENQVVKESSDSEVPKLHRIRTGHT 60
           M AE ++ L DSFW +  IL             ++    +V        P L        
Sbjct: 1   MSAEQILTLLDSFWFETTILTNKNPSKVEEILPQDTNLLLVP------TPNLD------V 48

Query: 61  RSMSDQ--SIATSFNHESLSPNSVLLAPKLQTIFSGKEVVDSEAEETPVVQHHEVLLSEK 118
           R  S+Q  SI  S   +S SPNSVL + KL+TI S +E  +     +          SE 
Sbjct: 49  RFYSEQNLSIIGSVFSDSPSPNSVLTSSKLRTIPSEREFGEFSTGTS----------SEN 98

Query: 119 NNNGNSTSCEKKKKNRGSKSLS-------DLEFEELKGFMDLGFVFSLEDKNSSLASIIP 171
           ++     +  KKK+++  +          +LEF+ELKGFMDLGFVFS EDK+S L S+IP
Sbjct: 99  HHQKEDVAYTKKKQSQSYRRRRRKSRSLSELEFKELKGFMDLGFVFSEEDKDSKLVSLIP 158

Query: 172 GLQRLGKKXXXXXXXX----XXXDSNESLVPRPYLSEAWEFHGKRKKENPLMNWKVPSLK 227
           GLQRLG++               D N     +PYLSEAW+   +R+++NPL+NW+VP   
Sbjct: 159 GLQRLGRENDDAEEGEDEEHKKIDENVLSDNKPYLSEAWDVFDQRERKNPLVNWRVPDKG 218

Query: 228 NEIDMKDSLRLWAHTVASTVR 248
           +EIDMKD+L+ WAH VAS  R
Sbjct: 219 SEIDMKDNLKFWAHAVASIAR 239


>Medtr2g078620.1 | hypothetical protein | HC |
           chr2:32817930-32815804 | 20130731
          Length = 322

 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 60/111 (54%), Gaps = 16/111 (14%)

Query: 137 KSLSDLEFEELKGFMDLGFVFSLEDKNSSLASIIPGLQRLGKKXXXXXXXXXXXDSNESL 196
           +SLSDLE+EE++GF DLGF F  E  + SLA+IIPGLQ   +            +S E  
Sbjct: 225 RSLSDLEYEEVQGFKDLGFSFEKEALSPSLANIIPGLQEKNR-----------DESEEDK 273

Query: 197 VPR-PYLSEAWEFHGKRKKENPLMNWKVPSLKNEIDMKDSLRLWAHTVAST 246
             R PYLSEAW          P+ NW   +  +  DMK  ++ WA  VAST
Sbjct: 274 AARGPYLSEAWLVQS--CATPPVPNWG--NKMSADDMKKHIKFWARAVAST 320