Miyakogusa Predicted Gene

Lj4g3v2605950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2605950.1 Non Characterized Hit- tr|G5AB42|G5AB42_PHYSP
Putative uncharacterized protein OS=Phytophthora sojae,27.24,9e-19,no
description,WD40/YVTN repeat-like-containing domain; WD40,WD40 repeat;
WD40 repeats,WD40 repeat;
,NODE_77264_length_1426_cov_26.746845.path2.1
         (321 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g086605.1 | transducin/WD-like repeat-protein | HC | chr8:...   508   e-144
Medtr8g086605.2 | transducin/WD-like repeat-protein | HC | chr8:...   462   e-130

>Medtr8g086605.1 | transducin/WD-like repeat-protein | HC |
           chr8:35940332-35933082 | 20130731
          Length = 394

 Score =  508 bits (1309), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/323 (76%), Positives = 276/323 (85%), Gaps = 2/323 (0%)

Query: 1   MDVSTEAVVSLCFKPGKEDNIYVSSGKEINCFDVRLATAKWEPLESYNYNKEEINKVTCN 60
           MDVS + ++SLCFK G EDNIYVSSGKEI CFDVRLAT KWEPLE+YNYNKEEINKVTCN
Sbjct: 72  MDVSDDPILSLCFKSGNEDNIYVSSGKEIKCFDVRLATTKWEPLENYNYNKEEINKVTCN 131

Query: 61  SRSSFLAAADDSGEVKIIDIRQQCLHKTLRA--GHTSICSSVEFLPWRSWEVISGGLDSA 118
           S+SSFLAAADDSGEVKIIDIRQ CL+KTLRA  GHTSICS+VEFLPWRSWEVISGGLDS 
Sbjct: 132 SKSSFLAAADDSGEVKIIDIRQHCLYKTLRAETGHTSICSTVEFLPWRSWEVISGGLDST 191

Query: 119 LVWWDFSNGRHNKIANFGNVSSSNAGQCYNPSFIHAIAVPETDMIDKLDKICXXXXXXXX 178
           LV W+FS  R  K+ NFGNVS+S AGQC+NPS IHAIAVPE DM+DKL KIC        
Sbjct: 192 LVLWEFSKARPYKVLNFGNVSNSGAGQCFNPSLIHAIAVPEIDMVDKLGKICAVAGGDVI 251

Query: 179 XXXXXEAEIACMKSKGFSNSRKGSQSRPKQGSSTSNTDADQNGRRRLQLDYTLGGHNAAV 238
                E+EIA ++SK  SN+RKGSQSR K GSS++NTDAD N ++RLQ DYT+GGH +AV
Sbjct: 252 NVIDIESEIAAVRSKSSSNTRKGSQSRLKGGSSSNNTDADDNVKKRLQFDYTIGGHTSAV 311

Query: 239 SSLEFSLFGERGKFLVSGGNDRLVKVWNWSSYRDAGISDGNNDILHLNIGVPQKVNCLCT 298
           SSL FS+FGERGKFL+SGGND+LVKVWNWS Y DAG SDGNNDILHLNIGVPQKVN LCT
Sbjct: 312 SSLAFSMFGERGKFLISGGNDKLVKVWNWSRYTDAGSSDGNNDILHLNIGVPQKVNWLCT 371

Query: 299 TTADTDNLVVCDTSKTVKVYSVT 321
           T+ADTDNLVVCDTSKTVKV+S+T
Sbjct: 372 TSADTDNLVVCDTSKTVKVHSLT 394


>Medtr8g086605.2 | transducin/WD-like repeat-protein | HC |
           chr8:35940331-35933149 | 20130731
          Length = 377

 Score =  462 bits (1188), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/295 (75%), Positives = 249/295 (84%), Gaps = 2/295 (0%)

Query: 1   MDVSTEAVVSLCFKPGKEDNIYVSSGKEINCFDVRLATAKWEPLESYNYNKEEINKVTCN 60
           MDVS + ++SLCFK G EDNIYVSSGKEI CFDVRLAT KWEPLE+YNYNKEEINKVTCN
Sbjct: 72  MDVSDDPILSLCFKSGNEDNIYVSSGKEIKCFDVRLATTKWEPLENYNYNKEEINKVTCN 131

Query: 61  SRSSFLAAADDSGEVKIIDIRQQCLHKTLRA--GHTSICSSVEFLPWRSWEVISGGLDSA 118
           S+SSFLAAADDSGEVKIIDIRQ CL+KTLRA  GHTSICS+VEFLPWRSWEVISGGLDS 
Sbjct: 132 SKSSFLAAADDSGEVKIIDIRQHCLYKTLRAETGHTSICSTVEFLPWRSWEVISGGLDST 191

Query: 119 LVWWDFSNGRHNKIANFGNVSSSNAGQCYNPSFIHAIAVPETDMIDKLDKICXXXXXXXX 178
           LV W+FS  R  K+ NFGNVS+S AGQC+NPS IHAIAVPE DM+DKL KIC        
Sbjct: 192 LVLWEFSKARPYKVLNFGNVSNSGAGQCFNPSLIHAIAVPEIDMVDKLGKICAVAGGDVI 251

Query: 179 XXXXXEAEIACMKSKGFSNSRKGSQSRPKQGSSTSNTDADQNGRRRLQLDYTLGGHNAAV 238
                E+EIA ++SK  SN+RKGSQSR K GSS++NTDAD N ++RLQ DYT+GGH +AV
Sbjct: 252 NVIDIESEIAAVRSKSSSNTRKGSQSRLKGGSSSNNTDADDNVKKRLQFDYTIGGHTSAV 311

Query: 239 SSLEFSLFGERGKFLVSGGNDRLVKVWNWSSYRDAGISDGNNDILHLNIGVPQKV 293
           SSL FS+FGERGKFL+SGGND+LVKVWNWS Y DAG SDGNNDILHLNIGVPQKV
Sbjct: 312 SSLAFSMFGERGKFLISGGNDKLVKVWNWSRYTDAGSSDGNNDILHLNIGVPQKV 366