Miyakogusa Predicted Gene

Lj4g3v2604620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2604620.1 CUFF.51296.1
         (1427 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g086300.1 | SCAR3 | HC | chr8:35790465-35782825 | 20130731      755   0.0  
Medtr4g013235.3 | SCAR2, putative | HC | chr4:3624743-3632913 | ...   193   1e-48
Medtr4g013235.2 | SCAR2, putative | HC | chr4:3624743-3632836 | ...   193   1e-48
Medtr4g013235.1 | SCAR2, putative | HC | chr4:3624744-3632964 | ...   193   1e-48
Medtr7g071440.1 | SCAR2, putative | HC | chr7:26469401-26462014 ...   177   7e-44

>Medtr8g086300.1 | SCAR3 | HC | chr8:35790465-35782825 | 20130731
          Length = 1210

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/863 (54%), Positives = 560/863 (64%), Gaps = 69/863 (7%)

Query: 563  GEEESDPI-SEPHASNLGLVSPSNVLDSMRITGDTFSVRKEAFREPDFLQEIPSLPSEPH 621
            GE ++D I SEP   N   V   N +DS       +  ++E       +Q+  S  +   
Sbjct: 386  GEIQADDIDSEPDNDNF--VDALNSIDSESEVDLDYETKRE-------VQQFASHVTREI 436

Query: 622  ASNLGSVSPSDVLDSEKITRDPDSLNKEAFRELDLPQEIPPVPSEPHVSNSEPVNPSDVA 681
              N G+ S S++LDS+     PDSL           QE PP+ SE + SN       D+ 
Sbjct: 437  VENGGTESHSNLLDSDI----PDSL-----------QENPPLKSELYASNLGSETTPDIP 481

Query: 682  YSEEITRETVSVNKEMLGNSPDSLQEIPPLIPEPHA---EPENLSDILHSQEITREAVSL 738
              E++T++T   ++E++   P+SLQEI  L  EP     EP + SD           V  
Sbjct: 482  DIEKVTKDTFYSDQEVIHGLPNSLQEISHLTSEPLTPDFEPASPSD-----------VPY 530

Query: 739  NKEMFGNLPDSQQGIPPLTPEPHASNLGYVSSSDVSSTK----NVADSHSSESPNSEQDR 794
             KE F N PD+   I PLT EPHASNLGYVSSSDVSST+    NVADSHSS+SP SE+D 
Sbjct: 531  RKETFDNFPDTLPEIAPLTSEPHASNLGYVSSSDVSSTQEITNNVADSHSSDSPISERDL 590

Query: 795  HTHKNDVLDHSVYTHTFSGSHTANDTVSAPIKTDIXXXXXXXXXXPDEEAGKINNSICKY 854
            HTH N VLDH V THT   S T +D VS PI TD           PDE AGKINN I KY
Sbjct: 591  HTHDNSVLDHLVGTHTSIDSPTVSDAVSTPIITDTPSSGSKL---PDENAGKINN-IFKY 646

Query: 855  EETRRDSLGDHPVSFWTNGGLLGLEXXXXXXXXXXXXXXXXXXXXXXEMDGVSRHDSMQK 914
            E+  ++S  D+ V FWTNGGLLGLE                      +M+G S  +S+QK
Sbjct: 647  EDAHKESFSDNSVRFWTNGGLLGLEPSKPPDFTMSSSLNQGSLSLKNDMNGGSLGNSIQK 706

Query: 915  SN--GHKEQQELSHEVTEQNRKGSSFGFSTARHNDGRSCISEKTSGSSQLSNGFCQTERN 972
            SN   HKE  ELS +V +Q  K SS     +R++D ++C SE TS  SQ +NG   T+RN
Sbjct: 707  SNDCAHKEGHELSEKVPQQILKESS-----SRYDD-QACASEYTSIGSQQNNG--HTKRN 758

Query: 973  SLAEAGVMAPGSVLPAGPATRDCTEHSQGNGENSSRMFGLGPRLLLKSFNRKVSFDEKSG 1032
            +L EA   AP +VL A   T+DC E +QGNGENSS++FGLG RLL+KSFNRKVSFDEKSG
Sbjct: 759  NLVEANSTAPRTVLTAVADTKDCAEPNQGNGENSSQVFGLGHRLLIKSFNRKVSFDEKSG 818

Query: 1033 PYNSLRSVILEQSGQNDTADQ-PLPETTFKEKAGSGYPIDSLPPSPPLENMKISFRPVSG 1091
            PY+SL+SVILEQS QN        PETTFKEK    YPIDSLPPSPPLE+MKISF+P+SG
Sbjct: 819  PYSSLKSVILEQSEQNSVVRHLQQPETTFKEKVSFRYPIDSLPPSPPLEHMKISFQPLSG 878

Query: 1092 LEISKLKLKFPDGSNHHESIREMFPSFQLVPESSSIPLXXXXXXXXXXXTFCRSSPYVSD 1151
            LE SKLKL+FPDG N HESI +MFPSFQLVP+SS IP+           TFCRSSP  SD
Sbjct: 879  LETSKLKLQFPDGGNRHESIMDMFPSFQLVPDSS-IPMDDLGSHSDGDDTFCRSSPCASD 937

Query: 1152 GCHTPCSDYDSDQWESDETPESSDHGVLDSPH----SEPMLSSKVHGGVSNDDTNIKCGH 1207
             CHTP SDYDSDQWESDETPESSDHG+ DSPH    +E  LS+K HG +SN+DT++   H
Sbjct: 938  DCHTPRSDYDSDQWESDETPESSDHGIHDSPHRSSSAESSLSTKEHGRLSNNDTDLNNEH 997

Query: 1208 GTYNTNGVEPSLSGSSLDFPSYDTVNPFFEKESNEHSKCNNVVMLHSQAEXXXXXXXXXX 1267
                 NGVEPSLSGS LDFPS++ VNP  EKESN H +CN  V  HS AE          
Sbjct: 998  ----MNGVEPSLSGSLLDFPSFENVNPVHEKESNRHHECNKDVTSHSHAEPTRPPPPPPV 1053

Query: 1268 XXXXTQCRVSKPQLDVTNETQNNMSEDAEHIYNRSLSESTIFQQRRIAKVEQIQSNHDGH 1327
                TQ RV+KPQLD +NETQN+MSEDAEH+ +++L ESTIFQQ R AKVE+IQ NHDG 
Sbjct: 1054 PP--TQWRVTKPQLDKSNETQNSMSEDAEHLSDQNLPESTIFQQPRHAKVEKIQRNHDGF 1111

Query: 1328 ESYENMIHQLKEKLDQPKLNGWKEANQLRMGKETDEREDFLHQIRAKSFNLRPTVTGKPN 1387
            ESY+ +I++LKEKL  PKLN  KEANQLRMGK+ DE+EDFL+QIR KSFNLRPTVTGK N
Sbjct: 1112 ESYDAIINKLKEKLGPPKLNVQKEANQLRMGKDIDEKEDFLYQIRTKSFNLRPTVTGKSN 1171

Query: 1388 ATTVPTASVKVTAILEKANAIRQ 1410
             TT PT +VKVTAILEKANAIRQ
Sbjct: 1172 VTTGPTTNVKVTAILEKANAIRQ 1194



 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/594 (60%), Positives = 413/594 (69%), Gaps = 32/594 (5%)

Query: 104 MPLVRLQVRNEFNLGQPELYREANREDPKXXXXXXXXXXXXXXXRQLGDLADFAAEVFHG 163
           MPLVRLQV+NEF LG PELYR+ANR+DPK               RQLGDLADFAAEVFHG
Sbjct: 1   MPLVRLQVKNEFGLGGPELYRDANRDDPKALLDGVAVAGLVGILRQLGDLADFAAEVFHG 60

Query: 164 LQEQVMTTASRSHRLNVRVRNIEASLPSLERAVLAQTSHIHFAYTAGCEWHPRIKTARNH 223
           LQEQV TTASRSH+L VRV+NIEASLP LE+AVLAQTSHIHFAYTAGCEWHPRIKTARNH
Sbjct: 61  LQEQVTTTASRSHKLMVRVQNIEASLPPLEKAVLAQTSHIHFAYTAGCEWHPRIKTARNH 120

Query: 224 FIYNDLPHFMMDSYEECREPPRVHLLDKFDTSGPGSCFRRYSDPTFFRRVSTDLDEPYXX 283
           FIYNDLP F+MDSYEECR+PPR+HLLDKFDT GPGSCFRRYSDPTFF+RVS D +E Y  
Sbjct: 121 FIYNDLPPFIMDSYEECRDPPRMHLLDKFDTGGPGSCFRRYSDPTFFKRVSADSEERYSE 180

Query: 284 XXXXXXXXXXXXXXXXXXXXXXXXXGEQMHSSSGRMQFXXXXXXXXXXXXQAASTIDMAM 343
                                    GEQM  +SG MQF            + ASTIDM M
Sbjct: 181 KTEKARKSRKIKKRRSSRRNSGLLRGEQMLGNSGSMQF-ISPSINGRTSSRTASTIDMTM 239

Query: 344 KSDMEDYSNSFDSKSGAGYIECVFHPSNYLQPDEQDCKEPSSSRSTQKINNR------QS 397
           +SD+ED SNSFDSKSGAGYIECVFHP+N +QPDEQDCKEPSSSR T K +N       +S
Sbjct: 240 RSDVEDRSNSFDSKSGAGYIECVFHPNNSMQPDEQDCKEPSSSRLTPKTDNLKSVSPPKS 299

Query: 398 VSPAIDDSISHDSLEKKIASSSSGVTWDEKEEIVESNSQACDTDKITERLVEKHDSDMRV 457
           VSP IDD+IS+DSLEK+IASSSSGVTWDEKEEI+ESNSQAC+ DK  ERLVEK DSDM V
Sbjct: 300 VSPPIDDNISNDSLEKQIASSSSGVTWDEKEEILESNSQACEADKTPERLVEKCDSDMHV 359

Query: 458 EEAVATTNIDYNDILYNEERNLKQVSSRVQIDDIDSEP--DDYMDALNTIESESEIDLDY 515
            EAV  +NIDYNDIL+NEER LK V   +Q DDIDSEP  D+++DALN+I+SESE+DLDY
Sbjct: 360 SEAVNISNIDYNDILFNEERILKPVFGEIQADDIDSEPDNDNFVDALNSIDSESEVDLDY 419

Query: 516 ETKRELQRFTSLVTDGMVENEVTRSPSKLLDNNVSDVLQTVPLNKDTGEEESDPISEPHA 575
           ETKRE+Q+F S VT  +VEN  T S S LLD+++ D LQ  P  K          SE +A
Sbjct: 420 ETKREVQQFASHVTREIVENGGTESHSNLLDSDIPDSLQENPPLK----------SELYA 469

Query: 576 SNLGLVSPSNVLDSMRITGDTFSVRKEAFRE-PDFLQEIPSLPSEPHASNLGSVSPSDVL 634
           SNLG  +  ++ D  ++T DTF   +E     P+ LQEI  L SEP   +    SPSDV 
Sbjct: 470 SNLGSETTPDIPDIEKVTKDTFYSDQEVIHGLPNSLQEISHLTSEPLTPDFEPASPSDV- 528

Query: 635 DSEKITRDPDSLNKEAFREL-DLPQEIPPVPSEPHVSNSEPVNPSDVAYSEEIT 687
                        KE F    D   EI P+ SEPH SN   V+ SDV+ ++EIT
Sbjct: 529 ----------PYRKETFDNFPDTLPEIAPLTSEPHASNLGYVSSSDVSSTQEIT 572


>Medtr4g013235.3 | SCAR2, putative | HC | chr4:3624743-3632913 |
           20130731
          Length = 1500

 Score =  193 bits (491), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 113/168 (67%)

Query: 104 MPLVRLQVRNEFNLGQPELYREANREDPKXXXXXXXXXXXXXXXRQLGDLADFAAEVFHG 163
           MP+ +  +RNE++L  PELYR A+++DP+               RQLGDLA+FAAE+FH 
Sbjct: 1   MPISKYLIRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHD 60

Query: 164 LQEQVMTTASRSHRLNVRVRNIEASLPSLERAVLAQTSHIHFAYTAGCEWHPRIKTARNH 223
           L E+VM TA+R H L  RV+ +EA +PSLE+A  +QT H  F    G +WH  I++ +N 
Sbjct: 61  LHEEVMATAARGHSLTARVKQLEAEVPSLEKAFFSQTHHSSFFTNGGIDWHRNIQSEQNL 120

Query: 224 FIYNDLPHFMMDSYEECREPPRVHLLDKFDTSGPGSCFRRYSDPTFFR 271
               +LP  +MDSYEECR PPR+ LLDKFD +G G+C +RY+DP+FF+
Sbjct: 121 VSSGNLPRLIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFK 168


>Medtr4g013235.2 | SCAR2, putative | HC | chr4:3624743-3632836 |
           20130731
          Length = 1572

 Score =  193 bits (490), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 113/168 (67%)

Query: 104 MPLVRLQVRNEFNLGQPELYREANREDPKXXXXXXXXXXXXXXXRQLGDLADFAAEVFHG 163
           MP+ +  +RNE++L  PELYR A+++DP+               RQLGDLA+FAAE+FH 
Sbjct: 1   MPISKYLIRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHD 60

Query: 164 LQEQVMTTASRSHRLNVRVRNIEASLPSLERAVLAQTSHIHFAYTAGCEWHPRIKTARNH 223
           L E+VM TA+R H L  RV+ +EA +PSLE+A  +QT H  F    G +WH  I++ +N 
Sbjct: 61  LHEEVMATAARGHSLTARVKQLEAEVPSLEKAFFSQTHHSSFFTNGGIDWHRNIQSEQNL 120

Query: 224 FIYNDLPHFMMDSYEECREPPRVHLLDKFDTSGPGSCFRRYSDPTFFR 271
               +LP  +MDSYEECR PPR+ LLDKFD +G G+C +RY+DP+FF+
Sbjct: 121 VSSGNLPRLIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFK 168



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)

Query: 1360 ETDEREDFLHQIRAKSFNLRPTVTGKPNATTVPTASVKVTAILEKANAIRQ 1410
            + DER+ +L QIR KSFNL+P V  +P     P  ++K+ AILEKAN+IRQ
Sbjct: 1507 KVDERDSWLEQIRTKSFNLKPAVATRPRIQG-PKTNMKLAAILEKANSIRQ 1556


>Medtr4g013235.1 | SCAR2, putative | HC | chr4:3624744-3632964 |
           20130731
          Length = 1573

 Score =  193 bits (490), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 113/168 (67%)

Query: 104 MPLVRLQVRNEFNLGQPELYREANREDPKXXXXXXXXXXXXXXXRQLGDLADFAAEVFHG 163
           MP+ +  +RNE++L  PELYR A+++DP+               RQLGDLA+FAAE+FH 
Sbjct: 1   MPISKYLIRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHD 60

Query: 164 LQEQVMTTASRSHRLNVRVRNIEASLPSLERAVLAQTSHIHFAYTAGCEWHPRIKTARNH 223
           L E+VM TA+R H L  RV+ +EA +PSLE+A  +QT H  F    G +WH  I++ +N 
Sbjct: 61  LHEEVMATAARGHSLTARVKQLEAEVPSLEKAFFSQTHHSSFFTNGGIDWHRNIQSEQNL 120

Query: 224 FIYNDLPHFMMDSYEECREPPRVHLLDKFDTSGPGSCFRRYSDPTFFR 271
               +LP  +MDSYEECR PPR+ LLDKFD +G G+C +RY+DP+FF+
Sbjct: 121 VSSGNLPRLIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFK 168



 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)

Query: 1360 ETDEREDFLHQIRAKSFNLRPTVTGKPNATTVPTASVKVTAILEKANAIRQ 1410
            + DER+ +L QIR KSFNL+P V  +P     P  ++K+ AILEKAN+IRQ
Sbjct: 1508 KVDERDSWLEQIRTKSFNLKPAVATRPRIQG-PKTNMKLAAILEKANSIRQ 1557


>Medtr7g071440.1 | SCAR2, putative | HC | chr7:26469401-26462014 |
           20130731
          Length = 1495

 Score =  177 bits (449), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 105/168 (62%)

Query: 104 MPLVRLQVRNEFNLGQPELYREANREDPKXXXXXXXXXXXXXXXRQLGDLADFAAEVFHG 163
           MP+ R  +RN   L  PEL+  A+++D +               RQLGDLA FAAE+FH 
Sbjct: 1   MPISRYHIRNAHGLADPELHSAADKDDSEALLEAVAMSGLVGFLRQLGDLAQFAAELFHD 60

Query: 164 LQEQVMTTASRSHRLNVRVRNIEASLPSLERAVLAQTSHIHFAYTAGCEWHPRIKTARNH 223
           L E+VM TA R H L  RV+ +EA +P LE+  L++T H  F    G +W P +++  + 
Sbjct: 61  LHEEVMATAERGHSLTSRVQQLEAEIPPLEKVFLSRTHHSSFFTNGGIDWCPNLRSEPHL 120

Query: 224 FIYNDLPHFMMDSYEECREPPRVHLLDKFDTSGPGSCFRRYSDPTFFR 271
               DLP F+MDSYEECR PPR+ LLDKFD +G GSC +RYSDP+FF+
Sbjct: 121 VTRGDLPRFIMDSYEECRAPPRLFLLDKFDVAGAGSCLKRYSDPSFFK 168



 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 1332 NMIHQLKEKLDQPKLNGWKEANQLRMGKETDEREDFLHQIRAKSFNLRPTVTGKPNATTV 1391
            N +  +   LD+ +L    +  +  +  + DER+  L QIR KSFNLRP V  +PN    
Sbjct: 1401 NHLFDVVAALDKSRLRKVTDRVRPPIAPKVDERDSLLEQIRTKSFNLRPAVATRPNVQG- 1459

Query: 1392 PTASVKVTAILEKANAIRQ 1410
            P  +++V AILEKAN+IRQ
Sbjct: 1460 PKTNLRVAAILEKANSIRQ 1478