Miyakogusa Predicted Gene
- Lj4g3v2604490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2604490.1 tr|F2CR04|F2CR04_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,36.28,2e-18,seg,NULL; no description,Thioredoxin-like fold;
Thioredoxin-like,Thioredoxin-like fold,CUFF.51283.1
(367 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g086060.1 | thioredoxin family protein, putative | HC | ch... 426 e-119
Medtr1g115235.1 | thioredoxin superfamily protein, putative | HC... 110 2e-24
Medtr1g115235.3 | thioredoxin superfamily protein, putative | HC... 86 6e-17
Medtr1g115235.4 | thioredoxin superfamily protein, putative | HC... 57 3e-08
Medtr1g115235.2 | thioredoxin superfamily protein, putative | HC... 57 3e-08
>Medtr8g086060.1 | thioredoxin family protein, putative | HC |
chr8:35719691-35722568 | 20130731
Length = 352
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/377 (63%), Positives = 259/377 (68%), Gaps = 35/377 (9%)
Query: 1 MLILQAAISPKRFPPFLTTKVDAGFQGFSHXXXXXXXXXXXXXNHHIVK-----CSVSTK 55
MLILQ A+ P+ F PF ++ F +S HHIVK CSVST
Sbjct: 1 MLILQTALMPRTFSPFSHSR----FLSYS-----------TLSTHHIVKPISISCSVSTN 45
Query: 56 SHSNPEPEP-----KQRAGTKGRGRRSQQPTEDVVSNNDGDKGSAEVFPTTIPRKPRRGR 110
S S PEPEP KQR KG+ +S D VS N D+ S + FPTTIPRKPRRGR
Sbjct: 46 SSSKPEPEPNHPTSKQRPKNKGKIFQSG----DGVSINKDDRNSEDEFPTTIPRKPRRGR 101
Query: 111 KSEAMKVEDFVRDTLDRTFAAIREQNADALEGHETILXXXXXXXXXXXXXXXXXXXXXXX 170
KSEAMKVEDFVRD L+ TFAAIR+QNA ALE H+ I+
Sbjct: 102 KSEAMKVEDFVRDRLENTFAAIRQQNASALENHKDIMKDSVGDDCESKPKRGNDDSYEEE 161
Query: 171 XXXXXXXXXXXXXXXXXXXXXXXXXXWPVDADVGWGIRASEYFEKHPIKNVVGEDGVEID 230
WP+D DVGWGIRASEYFEKHPIKNVVG+DG EID
Sbjct: 162 VEEEEDGGGEKAVIEEESES------WPLDTDVGWGIRASEYFEKHPIKNVVGDDGAEID 215
Query: 231 WEGELDDCWVQEINCLEWESIAFHPSPLIVLVFERYNRATDNWKNLKELEKAIKVYWSAK 290
WEGE +D WVQEINCLEWES AFHPSPLIVLVFERYNRA DNWKNLKELEKAIKVYWSAK
Sbjct: 216 WEGETEDNWVQEINCLEWESFAFHPSPLIVLVFERYNRANDNWKNLKELEKAIKVYWSAK 275
Query: 291 DRLPPRAVKIDINIEKDLAYALKVRECPQILFLRGNKVVYREKELRTADELVQMIAFFYY 350
DRLPPRA+KIDINIEKDLAYALKVRECPQILFLRGNK+VYREKELRTADELVQMIAFFYY
Sbjct: 276 DRLPPRAIKIDINIEKDLAYALKVRECPQILFLRGNKMVYREKELRTADELVQMIAFFYY 335
Query: 351 SAKKPAWIDDKALYSRY 367
+AKKPAW+DDKALY R+
Sbjct: 336 NAKKPAWVDDKALYLRH 352
>Medtr1g115235.1 | thioredoxin superfamily protein, putative | HC |
chr1:51933378-51930785 | 20130731
Length = 337
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 22/176 (12%)
Query: 197 WPVDADVGWGIRASEYFEKHPIKNVVGEDGVE-----------IDWEGELDDCWVQEINC 245
WP DAD GWG ++F+K I+N ED + I W+ DD +++ I
Sbjct: 146 WPQDAD-GWGFSLGQFFDKITIQNKKKEDNDDAEDDDVDDDKPIVWQ---DDNYIRPIKD 201
Query: 246 L---EWESIAFHP-SPLIVLVFERYNRATDNWKNLKELEKAIKVYWSAKDRLP-PRAVKI 300
+ EW+ F SPLI+LV RY R DN K +ELEKA+ + W+ RLP PR V +
Sbjct: 202 MKAEEWDETVFKDISPLIILVHNRYRRPKDNEKIREELEKAVHIIWNC--RLPSPRCVAL 259
Query: 301 DINIEKDLAYALKVRECPQILFLRGNKVVYREKELRTADELVQMIAFFYYSAKKPA 356
D +E +L ALKV P+++F + K+++R+K +R+ADE +++AFFYY KP+
Sbjct: 260 DAVVETELVAALKVSVFPEVIFTKAGKILFRDKAIRSADEWSKIMAFFYYRGAKPS 315
>Medtr1g115235.3 | thioredoxin superfamily protein, putative | HC |
chr1:51933378-51930785 | 20130731
Length = 306
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 85/153 (55%), Gaps = 22/153 (14%)
Query: 197 WPVDADVGWGIRASEYFEKHPIKNVVGEDGVE-----------IDWEGELDDCWVQEINC 245
WP DAD GWG ++F+K I+N ED + I W+ DD +++ I
Sbjct: 146 WPQDAD-GWGFSLGQFFDKITIQNKKKEDNDDAEDDDVDDDKPIVWQ---DDNYIRPIKD 201
Query: 246 L---EWESIAFHP-SPLIVLVFERYNRATDNWKNLKELEKAIKVYWSAKDRLP-PRAVKI 300
+ EW+ F SPLI+LV RY R DN K +ELEKA+ + W+ RLP PR V +
Sbjct: 202 MKAEEWDETVFKDISPLIILVHNRYRRPKDNEKIREELEKAVHIIWNC--RLPSPRCVAL 259
Query: 301 DINIEKDLAYALKVRECPQILFLRGNKVVYREK 333
D +E +L ALKV P+++F + K+++R+K
Sbjct: 260 DAVVETELVAALKVSVFPEVIFTKAGKILFRDK 292
>Medtr1g115235.4 | thioredoxin superfamily protein, putative | HC |
chr1:51933378-51930785 | 20130731
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 22/117 (18%)
Query: 197 WPVDADVGWGIRASEYFEKHPIKNVVGEDGVE-----------IDWEGELDDCWVQEINC 245
WP DAD GWG ++F+K I+N ED + I W+ DD +++ I
Sbjct: 146 WPQDAD-GWGFSLGQFFDKITIQNKKKEDNDDAEDDDVDDDKPIVWQ---DDNYIRPIKD 201
Query: 246 L---EWESIAFHP-SPLIVLVFERYNRATDNWKNLKELEKAIKVYWSAKDRLP-PRA 297
+ EW+ F SPLI+LV RY R DN K +ELEKA+ + W+ RLP PR
Sbjct: 202 MKAEEWDETVFKDISPLIILVHNRYRRPKDNEKIREELEKAVHIIWNC--RLPSPRV 256
>Medtr1g115235.2 | thioredoxin superfamily protein, putative | HC |
chr1:51933378-51930785 | 20130731
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 22/117 (18%)
Query: 197 WPVDADVGWGIRASEYFEKHPIKNVVGEDGVE-----------IDWEGELDDCWVQEINC 245
WP DAD GWG ++F+K I+N ED + I W+ DD +++ I
Sbjct: 146 WPQDAD-GWGFSLGQFFDKITIQNKKKEDNDDAEDDDVDDDKPIVWQ---DDNYIRPIKD 201
Query: 246 L---EWESIAFHP-SPLIVLVFERYNRATDNWKNLKELEKAIKVYWSAKDRLP-PRA 297
+ EW+ F SPLI+LV RY R DN K +ELEKA+ + W+ RLP PR
Sbjct: 202 MKAEEWDETVFKDISPLIILVHNRYRRPKDNEKIREELEKAVHIIWNC--RLPSPRV 256