Miyakogusa Predicted Gene
- Lj4g3v2604080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2604080.1 Non Characterized Hit- tr|I3SNP4|I3SNP4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.9,0,seg,NULL;
Bet v1-like,NULL; PHEOPHORBIDE A OXYGENASE,NULL; IRON-SULFUR DOMAIN
CONTAINING PROTEIN,NUL,CUFF.51318.1
(303 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g085840.1 | chlorophyllide A oxygenase | HC | chr8:3559444... 531 e-151
Medtr8g085820.1 | chlorophyllide A oxygenase | HC | chr8:3558306... 506 e-143
Medtr8g085790.1 | chlorophyllide A oxygenase | HC | chr8:3556833... 480 e-136
Medtr8g085790.2 | chlorophyllide A oxygenase | HC | chr8:3556849... 229 4e-60
Medtr4g057200.1 | lethal leaf-spot protein, putative | HC | chr4... 131 8e-31
Medtr8g085810.1 | protochlorophyllide-dependent translocon compo... 86 4e-17
Medtr3g105820.1 | translocon at the inner envelope membrane ofs ... 66 5e-11
>Medtr8g085840.1 | chlorophyllide A oxygenase | HC |
chr8:35594442-35589475 | 20130731
Length = 529
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 255/304 (83%), Positives = 272/304 (89%), Gaps = 2/304 (0%)
Query: 1 MGNRDITYGYEVLIENLMDPSHVPYAHYGLMRTQQPKVKADREGGRPLELSIEKLDINGF 60
MGNRDI YGYEVLIENLMDPSHVPYAHYGLM+T QPKVKADREGGRPLELSIE+LD+NGF
Sbjct: 227 MGNRDIAYGYEVLIENLMDPSHVPYAHYGLMKTPQPKVKADREGGRPLELSIEELDVNGF 286
Query: 61 SADQGWSKSKFMPPCIFYAYT-PDQPASSAETKKPSFQKKFGLIFICVPVSPGNSRLIWC 119
+A+QGWSKSKFMPP IFYAYT P++PASS ETKK S QKKF LIFIC+PVSPGNSRLIWC
Sbjct: 287 TANQGWSKSKFMPPSIFYAYTDPNKPASSEETKKSSVQKKFALIFICIPVSPGNSRLIWC 346
Query: 120 FPRNFGLWIDKIVPRWMFHVGQNXXXXXXXXXXXXEEQKIMDVGQANWQKSCFVPTKADA 179
FPRNFGLWIDKIVPRW+FHVGQN EE+KIMDVGQANW K+CFVPTKADA
Sbjct: 347 FPRNFGLWIDKIVPRWIFHVGQNLILDSDLYLLHVEEKKIMDVGQANWHKACFVPTKADA 406
Query: 180 LVVGFRKWLKKYAGSQVEWRGKYSGGVLPPTPPREQLLDRYWSHTVNCRSCNSAYKSLKV 239
LV+GFRKWLKKYAG +VEWRGKY+G LPPTPPREQLLDRYWSHTVNC+SCN AYKSL V
Sbjct: 407 LVIGFRKWLKKYAGGEVEWRGKYNGA-LPPTPPREQLLDRYWSHTVNCKSCNFAYKSLNV 465
Query: 240 VEVMLQIISVASIGIVATMKQGGMSVVTRNSMVVFAVLSFALSRWLAHFIYKNFHYHDYN 299
VEVMLQIISVASIGIVATMKQG +S TRNSMV+ AVLSFALSR LAHFIYKNF YHDYN
Sbjct: 466 VEVMLQIISVASIGIVATMKQGVVSATTRNSMVLLAVLSFALSRLLAHFIYKNFRYHDYN 525
Query: 300 HAFR 303
HAFR
Sbjct: 526 HAFR 529
>Medtr8g085820.1 | chlorophyllide A oxygenase | HC |
chr8:35583064-35577716 | 20130731
Length = 527
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/302 (80%), Positives = 262/302 (86%), Gaps = 2/302 (0%)
Query: 1 MGNRDITYGYEVLIENLMDPSHVPYAHYGLMRTQQPKVKADREGGRPLELSIEKLDINGF 60
MGNRDI YGYEVL+ENLMDPSHVPYAHYGLM+T QPKVKADREGGRPLELSIE+LD+NGF
Sbjct: 203 MGNRDIPYGYEVLVENLMDPSHVPYAHYGLMKTPQPKVKADREGGRPLELSIEELDVNGF 262
Query: 61 SADQGWSKSKFMPPCIFYAYTP-DQPASSAETKKPSFQKKFGLIFICVPVSPGNSRLIWC 119
+ +QGWSKSKFMPP IFYAYT +P SS ETKK S QKKF LIF C+PVSPGNSRLIWC
Sbjct: 263 TENQGWSKSKFMPPSIFYAYTDLIKPVSSEETKKSSVQKKFALIFFCIPVSPGNSRLIWC 322
Query: 120 FPRNFGLWIDKIVPRWMFHVGQNXXXXXXXXXXXXEEQKIMDVGQANWQKSCFVPTKADA 179
FPRNFGLWIDKIVPRW+FH+GQN EE+KI+DVGQANW K+CFVPTKADA
Sbjct: 323 FPRNFGLWIDKIVPRWIFHIGQNLIIDSDLYLLHVEEKKILDVGQANWHKACFVPTKADA 382
Query: 180 LVVGFRKWLKKYAGSQVEWRGKYSGGVLPPTPPREQLLDRYWSHTVNCRSCNSAYKSLKV 239
LV+GFRKWLKKYAG QVEWRGKY+G LPPTP REQL+DRYWSH VNC+SCN AYKSL V
Sbjct: 383 LVIGFRKWLKKYAGDQVEWRGKYNGA-LPPTPSREQLMDRYWSHVVNCKSCNLAYKSLSV 441
Query: 240 VEVMLQIISVASIGIVATMKQGGMSVVTRNSMVVFAVLSFALSRWLAHFIYKNFHYHDYN 299
VEVMLQIISVASIGIVATMKQG +S TRNSMVV AVLSFAL R LAHFIYKNF YHDYN
Sbjct: 442 VEVMLQIISVASIGIVATMKQGLVSTTTRNSMVVLAVLSFALWRLLAHFIYKNFCYHDYN 501
Query: 300 HA 301
HA
Sbjct: 502 HA 503
>Medtr8g085790.1 | chlorophyllide A oxygenase | HC |
chr8:35568333-35564786 | 20130731
Length = 532
Score = 480 bits (1236), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/303 (76%), Positives = 255/303 (84%), Gaps = 5/303 (1%)
Query: 1 MGNRDITYGYEVLIENLMDPSHVPYAHYGLMRTQQPK-VKADREGGRPLELSIEKLDING 59
MGNRDI YGYEVL+ENLMDPSHVPYAHYGL T PK ADREGG PL+ S+E+LDING
Sbjct: 203 MGNRDIPYGYEVLVENLMDPSHVPYAHYGL--TPDPKGNNADREGGTPLDFSVEELDING 260
Query: 60 FSADQGWSKSKFMPPCIFYAYT-PDQPASSAETKKPSFQKKFGLIFICVPVSPGNSRLIW 118
F+A+QGW+KSKFMPP IFY Y+ PD+ ASS ETKK S QKKF +IFIC+PVSPG SRLIW
Sbjct: 261 FTANQGWNKSKFMPPSIFYLYSEPDKLASSVETKKSSVQKKFSMIFICIPVSPGKSRLIW 320
Query: 119 CFPRNFGLWIDKIVPRWMFHVGQNXXXXXXXXXXXXEEQKIMDVGQANWQKSCFVPTKAD 178
CFPRNFG+W DKIVPRW+ H+GQN EEQKIMDVGQ NW K+CFVPTKAD
Sbjct: 321 CFPRNFGVWADKIVPRWILHMGQNLILDSDLYLLHVEEQKIMDVGQGNWHKACFVPTKAD 380
Query: 179 ALVVGFRKWLKKYAGSQVEWRGKYSGGVLPPTPPREQLLDRYWSHTVNCRSCNSAYKSLK 238
ALV+GFRKWLKKYAG QV+WRGKYSG LPPTPPREQL+DRYWSHTVNC+SCN AYKSL
Sbjct: 381 ALVIGFRKWLKKYAGDQVDWRGKYSGA-LPPTPPREQLMDRYWSHTVNCKSCNFAYKSLN 439
Query: 239 VVEVMLQIISVASIGIVATMKQGGMSVVTRNSMVVFAVLSFALSRWLAHFIYKNFHYHDY 298
VVEVMLQIISVASIG VATMKQG +S TRNS+VV A+LSFALSR LAHFIYKNF YHDY
Sbjct: 440 VVEVMLQIISVASIGFVATMKQGIVSAATRNSIVVLAILSFALSRLLAHFIYKNFRYHDY 499
Query: 299 NHA 301
NH
Sbjct: 500 NHV 502
>Medtr8g085790.2 | chlorophyllide A oxygenase | HC |
chr8:35568496-35565845 | 20130731
Length = 396
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 123/144 (85%), Gaps = 4/144 (2%)
Query: 1 MGNRDITYGYEVLIENLMDPSHVPYAHYGLMRTQQPK-VKADREGGRPLELSIEKLDING 59
MGNRDI YGYEVL+ENLMDPSHVPYAHYGL T PK ADREGG PL+ S+E+LDING
Sbjct: 227 MGNRDIPYGYEVLVENLMDPSHVPYAHYGL--TPDPKGNNADREGGTPLDFSVEELDING 284
Query: 60 FSADQGWSKSKFMPPCIFYAYT-PDQPASSAETKKPSFQKKFGLIFICVPVSPGNSRLIW 118
F+A+QGW+KSKFMPP IFY Y+ PD+ ASS ETKK S QKKF +IFIC+PVSPG SRLIW
Sbjct: 285 FTANQGWNKSKFMPPSIFYLYSEPDKLASSVETKKSSVQKKFSMIFICIPVSPGKSRLIW 344
Query: 119 CFPRNFGLWIDKIVPRWMFHVGQN 142
CFPRNFG+W DKIVPRW+ H+GQN
Sbjct: 345 CFPRNFGVWADKIVPRWILHMGQN 368
>Medtr4g057200.1 | lethal leaf-spot protein, putative | HC |
chr4:20906265-20911203 | 20130731
Length = 542
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 153/319 (47%), Gaps = 42/319 (13%)
Query: 4 RDITYGYEVLIENLMDPSHVPYAHYGLMRTQQPKVKADREGGRPLELSIEKLDINGFS-A 62
RD+ YGY+ L+EN+ DPSH+ +AH+ KV R+ +PL ++ GFS A
Sbjct: 242 RDLFYGYDTLMENVSDPSHIDFAHH--------KVTGRRDRAKPLPFKMDSRGSWGFSGA 293
Query: 63 DQGWSK--SKFMPPCIFYAYTPDQPASSAETKKPSFQKKFGLIFIC---VPVSPGNSRLI 117
++G + SKF+ PC + +TK P + +I+IC VP++PG +R I
Sbjct: 294 NEGNPRISSKFIAPCYYINKV------EIDTKLPVVGDQKWVIWICSFNVPMAPGKTRSI 347
Query: 118 WCFPRNF--------GLWIDKIVPRWMFHVGQNXXXXXXXXXXXXEEQKIM----DVGQA 165
C RNF W ++VPRW H N +E+ + + G
Sbjct: 348 VCSARNFFQLTVPGPAWW--QVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLAETENGGDI 405
Query: 166 NWQKS--CFVPTKADALVVGFRKWLKKYAGSQVEWRGKYSGGVLPPTP-PREQLLDRYWS 222
N Q + F PT+AD V+ FR WL+++ Q EW GK S LP T + Q+LDR+
Sbjct: 406 NKQYTSLTFTPTQADRFVLAFRNWLRRHGNGQPEWFGKSSSQPLPSTVLSKRQMLDRFEQ 465
Query: 223 HTVNCRSCNSAYKSLKVVEVMLQIISVASIGIVATMKQGGMSVVTRNSMVVFAVLSFALS 282
HT+ C +C AY+ + + +L +V + ++ +V A L+F+++
Sbjct: 466 HTLKCSACKGAYEGFQTWQKILTGATVVFCATSGIPSDTQLRIILAALALVSAALAFSIN 525
Query: 283 RWLAHFIYKNFHYHDYNHA 301
+ + NF + DY HA
Sbjct: 526 Q-----LKNNFVFVDYVHA 539
>Medtr8g085810.1 | protochlorophyllide-dependent translocon
component 52, putative | LC | chr8:35577623-35576239 |
20130731
Length = 88
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 46/60 (76%), Gaps = 4/60 (6%)
Query: 160 MDVGQANWQKSCFVPTKADALVVGFRKWLKKYAGSQVEWRGKYSGGVLPPTPPREQLLDR 219
MDVGQANW K+CF + LV+GFRK LKKYAG +VEWRGKY G LP PPREQL+DR
Sbjct: 1 MDVGQANWHKACFCQQR---LVIGFRKCLKKYAGGEVEWRGKYD-GALPLAPPREQLMDR 56
>Medtr3g105820.1 | translocon at the inner envelope membrane ofs
protein 55-II | HC | chr3:48812416-48815358 | 20130731
Length = 552
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 102/270 (37%), Gaps = 51/270 (18%)
Query: 5 DITYGYEVLIENLMDPSHVPYAHYGLMRTQQPKVKADREGGRPLELSIEKLDINGFSADQ 64
++ Y + +L+ENLMDP+H+P +H + A RE +PL + + GF+
Sbjct: 239 ELPYDHSILLENLMDPAHIPISH------DRTDWTAKREDAQPLLFEVTERTDRGFAGWW 292
Query: 65 GWSKS-------KFMPPCIFYAYTPDQPASSAETKKPSFQKKFGLIFICVPVSPGNSRLI 117
G K +F PC+ + K F +F+C P G S LI
Sbjct: 293 GREKDGTKPNFLRFEAPCVLQ-------NNREIVDKNGEINYFSGLFLCRPTGQGKSMLI 345
Query: 118 WCFPRNFGLWIDKIVPRWMFHVGQNXXXXXXXXXXXXEEQKIMDVGQANWQKSCFVPTK- 176
F I K+ P+W FH QN Q + + + K ++ K
Sbjct: 346 VRFGGTKRSPIVKLFPQWYFH--QNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKS 403
Query: 177 ADALVVGFRKWLKKYAGSQVEWRGKYSGGVLPPTPP------------------------ 212
+D V +RKW+ K G + + ++ LP P
Sbjct: 404 SDTWVAEYRKWMDK-VGHGMPYHFGHNTISLPKEPAVIEHAPAGLIAGLSASSPAKGGIG 462
Query: 213 ---REQLLDRYWSHTVNCRSCNSAYKSLKV 239
L +RY+ H ++C+ C +A K+ +
Sbjct: 463 TMHAPNLANRYFRHVIHCKGCRTAVKAFQT 492