Miyakogusa Predicted Gene

Lj4g3v2603960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2603960.1 Non Characterized Hit- tr|I1KSB2|I1KSB2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7316
PE=,88.79,0,Nucleotide-diphospho-sugar transferases,NULL;
NTP_transferase,Nucleotidyl transferase; Hexapep,Bacte,CUFF.51228.1
         (455 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g085640.1 | translation initiation factor eIF-2B gamma sub...   726   0.0  
Medtr7g115610.1 | initiation factor-2Bepsilon-like protein | HC ...    61   2e-09

>Medtr8g085640.1 | translation initiation factor eIF-2B gamma
           subunit | HC | chr8:35495862-35491497 | 20130731
          Length = 467

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/455 (78%), Positives = 382/455 (83%), Gaps = 2/455 (0%)

Query: 1   MDFQVVVLGGGVSKNLLPLVSQELPKALLPVANRPXXXXXXXXXXXXXXKDLIVVVEGED 60
           MDFQVVVL GGVSK LLPLVS ELP ALLPVANRP              KDLIVVVEG+D
Sbjct: 1   MDFQVVVLAGGVSKKLLPLVSHELPNALLPVANRPVLSYVVELLELSNLKDLIVVVEGKD 60

Query: 61  AALHVGGWISGAYADRLHVEVAAVPEDVGTAGAIRAIARHLTAKDILVISGDVVSDVPLG 120
            AL+VG WISGAYADRLHVEVAAVPEDVGTAGAIRAIARHL AKDIL++SGD+VSDVP+G
Sbjct: 61  TALNVGAWISGAYADRLHVEVAAVPEDVGTAGAIRAIARHLYAKDILIVSGDLVSDVPIG 120

Query: 121 XXXXXXXXXXXXXXXMLCPAXXXXXXXXXXXXXKDKTKKPGRYDLIGLDPTKQFLLHIAT 180
                          +LC               KDK KKPGRYDLIGLDPTKQFLLHIAT
Sbjct: 121 AVAATHRRHDAVVTALLCNTPVSGPLESVSSGGKDKAKKPGRYDLIGLDPTKQFLLHIAT 180

Query: 181 GAEVEKDLRVQKSILRAAGQIEIRADLMDAHLYAFKRSVLQEVLDEKVAFHSLKHDVLPY 240
           GAEVEKDLR+QKSILR+ GQ+EIRADLMDAHLYAFKRSVL EVLD+   FHSLKHDVLPY
Sbjct: 181 GAEVEKDLRIQKSILRSVGQVEIRADLMDAHLYAFKRSVLLEVLDQNGEFHSLKHDVLPY 240

Query: 241 LVRSQLKSEVLLNGSPQAEENGNEKVISQSNQQMLSQILANASELTFHQRHALGPNGYGP 300
           LVRSQLKSEVLLNG+PQAEENG EKVISQSNQQMLSQILANASE TFH RH L  N  G 
Sbjct: 241 LVRSQLKSEVLLNGTPQAEENGTEKVISQSNQQMLSQILANASEPTFHLRHELSTN--GS 298

Query: 301 TSARKTHKCCVYIAGSGKYCARLNSIQAYSDINRDLIGESNHLSGYSFSAHNNFIDPTAE 360
            S R+THKCCVYIAGS KYCARLNS+QAY+DINRD+IGE++HLSGYSFS+HNN IDPTAE
Sbjct: 299 DSVRRTHKCCVYIAGSNKYCARLNSLQAYNDINRDVIGEASHLSGYSFSSHNNIIDPTAE 358

Query: 361 LGAKTTIGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKIVNSVVMNHVTIGDSCSIQ 420
           LGAKTT+GPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVK+VNSVVMNHVTIGD CSIQ
Sbjct: 359 LGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSVVMNHVTIGDGCSIQ 418

Query: 421 GSVICSNVQLQERAVLKDCQVGAGFVVTAGSDYKG 455
           GSVICSNVQLQERA LKDCQVGAG++VTAGSD KG
Sbjct: 419 GSVICSNVQLQERATLKDCQVGAGYMVTAGSDCKG 453


>Medtr7g115610.1 | initiation factor-2Bepsilon-like protein | HC |
           chr7:47797427-47785063 | 20130731
          Length = 722

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 19/149 (12%)

Query: 319 YCARLNSIQAYSDINRDLIGESNHLSGYSFSAH-NNFIDPTAEL-------------GAK 364
           Y AR+++ ++Y  +++D+I    H   Y       NF +   +L                
Sbjct: 277 YAARIDNFRSYDTVSKDII----HRWTYPLVPDVMNFGNTATKLERQGIYRGSDISQAQS 332

Query: 365 TTIGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKIVNSVVMNHVTIGDSCSIQGSVI 424
             +GP  ++G G+++G    +  SV+G  C+IG+NV I    + ++VTI D C ++ +++
Sbjct: 333 AVVGPFSVIGSGTKIGKNTKILNSVVGIGCKIGSNVHIEGCYIWDNVTIEDGCELRHAIV 392

Query: 425 CSNVQLQERAVLKDCQVGAGFVVTAGSDY 453
           C  V ++  + L+   V   F V  G ++
Sbjct: 393 CEGVIMKSGSALEPGVV-LSFKVVVGQEF 420