Miyakogusa Predicted Gene
- Lj4g3v2603750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2603750.1 Non Characterized Hit- tr|I1K3U4|I1K3U4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48845
PE,78.43,0,seg,NULL; Domain in Tre-2, BUB2p, and Cdc16p.
Probable,Rab-GTPase-TBC domain; TBC1 DOMAIN FAMILY MEM,CUFF.51211.1
(432 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g085300.1 | RabGAP/TBC domain protein | HC | chr8:35334451... 640 0.0
Medtr3g083840.1 | RabGAP/TBC domain protein | HC | chr3:37824348... 635 0.0
Medtr4g114580.1 | RabGAP/TBC domain protein | HC | chr4:47118501... 394 e-110
Medtr4g068180.1 | RabGAP/TBC domain protein | HC | chr4:25557345... 112 1e-24
Medtr2g099380.1 | RabGAP/TBC domain protein | HC | chr2:42598039... 109 5e-24
Medtr4g115090.1 | RabGAP/TBC domain protein | HC | chr4:47487726... 95 1e-19
Medtr1g069705.2 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 95 1e-19
Medtr1g069705.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 95 1e-19
Medtr4g081110.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 84 2e-16
Medtr2g083220.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 77 4e-14
Medtr2g099380.2 | RabGAP/TBC domain protein | HC | chr2:42598043... 76 5e-14
Medtr2g099185.1 | Rab GTPase activator | HC | chr2:42550462-4254... 71 2e-12
Medtr2g099185.2 | Rab GTPase activator | HC | chr2:42550462-4254... 71 2e-12
Medtr2g099185.3 | Rab GTPase activator | HC | chr2:42550766-4254... 71 2e-12
Medtr3g092100.1 | Rab GTPase activator | HC | chr3:42056500-4205... 70 4e-12
Medtr1g007590.2 | Rab GTPase activator | HC | chr1:448550-444409... 67 5e-11
Medtr1g007590.1 | Rab GTPase activator | HC | chr1:448550-444327... 66 5e-11
Medtr6g016590.1 | RabGAP/TBC domain protein | HC | chr6:6292883-... 66 8e-11
Medtr4g127450.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 62 1e-09
Medtr2g037930.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 54 2e-07
Medtr4g127450.2 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 54 4e-07
Medtr4g127450.3 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 53 5e-07
>Medtr8g085300.1 | RabGAP/TBC domain protein | HC |
chr8:35334451-35330009 | 20130731
Length = 443
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/377 (84%), Positives = 350/377 (92%), Gaps = 1/377 (0%)
Query: 57 QKIQDSRSDDDGDTSPSFSARDVPHQAQLLAELSRKVIDIRELRKLACDGVPDASGIRST 116
Q I+DSRSDD D SA DV H AQLLAELS+KV+D+RELR+++C GVPD++GIRST
Sbjct: 67 QIIEDSRSDDHHDHDVPPSAYDVSHHAQLLAELSKKVMDLRELRRISCQGVPDSAGIRST 126
Query: 117 VWKLLLGYLPPDRGLWSSELAKKRTQYKQFKEEVLMNPSEITWKMYNSLSCDSDEA-KCE 175
+WKLLLGYLPPDR LWSSELAKKR+QYKQFKEE+LMNPSEIT +MYNS D+D+A K +
Sbjct: 127 LWKLLLGYLPPDRALWSSELAKKRSQYKQFKEEILMNPSEITRRMYNSTIGDADDAAKRD 186
Query: 176 RALLSRSEITHGEHPLSLGKTSVWNQFFQDTEIIDQIDRDVMRTHPDMHFFSGDSQFAKL 235
RALLSRSEI H EHPLSLGKTSVWNQFFQDTEIIDQIDRDV RTHPDMHFFSGDS+FAK
Sbjct: 187 RALLSRSEIPHDEHPLSLGKTSVWNQFFQDTEIIDQIDRDVKRTHPDMHFFSGDSKFAKS 246
Query: 236 NQEALKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKNDPDEENSAFAEADTFFCFVELL 295
NQEALKNILIIFAKLNPGV+YVQGMNE+LAPLFYVFKNDPDEEN+AFAEAD FFCFVELL
Sbjct: 247 NQEALKNILIIFAKLNPGVKYVQGMNELLAPLFYVFKNDPDEENAAFAEADAFFCFVELL 306
Query: 296 SGFRDNFVQQLDNSAVGIRATITRLSQLLKEHDEELWRHLEITSKVNPQFYAFRWITLLL 355
SG RDNFVQQLDNS VGIR+TIT+LSQLL++HDEELWRHLEITSK+NPQFYAFRWITLLL
Sbjct: 307 SGLRDNFVQQLDNSVVGIRSTITKLSQLLRKHDEELWRHLEITSKINPQFYAFRWITLLL 366
Query: 356 TQEFNFADSIHIWDTILSDPEGPQETLLRICCAMLILIRKRLLAGDFTSNLKLLQNYPTT 415
TQEFNFADS+HIWDT+L DPEGPQETLLR+CCAMLILIRKRLLAGDFTSNLKLLQNYP+T
Sbjct: 367 TQEFNFADSLHIWDTLLGDPEGPQETLLRVCCAMLILIRKRLLAGDFTSNLKLLQNYPST 426
Query: 416 NISHLLYVANKFRVQSI 432
NISHLLYVANKFRVQS+
Sbjct: 427 NISHLLYVANKFRVQSV 443
>Medtr3g083840.1 | RabGAP/TBC domain protein | HC |
chr3:37824348-37830080 | 20130731
Length = 432
Score = 635 bits (1639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/358 (82%), Positives = 336/358 (93%), Gaps = 1/358 (0%)
Query: 76 ARDVPHQAQLLAELSRKVIDIRELRKLACDGVPDASGIRSTVWKLLLGYLPPDRGLWSSE 135
+R Q+QLLAELSRKVID+RELRK+A G+PD+ G+RST+WKLLLGYLPPDR LWSSE
Sbjct: 75 SRLAQSQSQLLAELSRKVIDMRELRKIASQGIPDSPGLRSTIWKLLLGYLPPDRSLWSSE 134
Query: 136 LAKKRTQYKQFKEEVLMNPSEITWKMYNSLSCDSDEAKCE-RALLSRSEITHGEHPLSLG 194
LAKKR+QYK+FK+++L+NPSEIT +M+NS S D+D+ KCE R +LSRS+ITHGEHPLSLG
Sbjct: 135 LAKKRSQYKRFKQDILINPSEITRRMFNSASYDADDVKCETRGMLSRSQITHGEHPLSLG 194
Query: 195 KTSVWNQFFQDTEIIDQIDRDVMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGV 254
KTS+WNQFFQDT+II+QIDRDV RTHPDMHFF GDSQ AK NQEALKNILIIFAKLNPG+
Sbjct: 195 KTSIWNQFFQDTDIIEQIDRDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGI 254
Query: 255 RYVQGMNEVLAPLFYVFKNDPDEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIR 314
RYVQGMNEVLAPLFYVFKNDPDEEN+AF+EADTFFCFVELLSGFRDNF QQLDNS VGIR
Sbjct: 255 RYVQGMNEVLAPLFYVFKNDPDEENAAFSEADTFFCFVELLSGFRDNFCQQLDNSIVGIR 314
Query: 315 ATITRLSQLLKEHDEELWRHLEITSKVNPQFYAFRWITLLLTQEFNFADSIHIWDTILSD 374
+TITRLSQLLKEHDEELWRHLE+T+KVNPQFYAFRWITLLLTQEF+FADS+ IWDT++SD
Sbjct: 315 STITRLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFDFADSLRIWDTLVSD 374
Query: 375 PEGPQETLLRICCAMLILIRKRLLAGDFTSNLKLLQNYPTTNISHLLYVANKFRVQSI 432
P+GPQETLLR+CCAMLIL+R+RLLAGDFTSNLKLLQ+YP+TNISHLL+VANK RVQSI
Sbjct: 375 PDGPQETLLRVCCAMLILVRRRLLAGDFTSNLKLLQSYPSTNISHLLHVANKLRVQSI 432
>Medtr4g114580.1 | RabGAP/TBC domain protein | HC |
chr4:47118501-47122390 | 20130731
Length = 467
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 250/345 (72%), Gaps = 2/345 (0%)
Query: 82 QAQLLAELSRKVIDIRELRKLACDGVPDASGIRSTVWKLLLGYLPPDRGLWSSELAKKRT 141
++ L ELSRK I++ +LR++A G+PD G+R+T WKLLLGYLP LW ++L R
Sbjct: 109 RSDLEYELSRKEINLEKLRRIASTGIPDGGGLRATAWKLLLGYLPLCHELWETQLKDNRL 168
Query: 142 QYKQFKEEVLMNPSEITWKMYNSLSCDS-DEAKCERALLSRSEITHGEHPLSLGKTSVWN 200
+Y K+E+L NPSE WK LS + L R EI +HPLSL K S+W
Sbjct: 169 KYVNMKKELLSNPSEHIWKEPKHLSSTKRHDNNAIDGPLRRHEIPVEDHPLSLDKESLWR 228
Query: 201 QFFQDTEIIDQIDRDVMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGM 260
Q+FQ TEI +QIDRD+ RTHPDM FFS ++ F++ N+EA+KNIL++FAKLNP + YVQGM
Sbjct: 229 QYFQHTEIAEQIDRDLQRTHPDMPFFSAETSFSRKNREAMKNILLLFAKLNPAICYVQGM 288
Query: 261 NEVLAPLFYVFKNDPDEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRATITRL 320
NEVLAP++YVF D D +N+A AEAD+F CFV +L D+F QQLDNS+ GI AT++RL
Sbjct: 289 NEVLAPIYYVFSADNDNQNAANAEADSFSCFVRILGDSVDHFCQQLDNSSSGILATLSRL 348
Query: 321 SQLLKEHDEELWRHLEITSKVNPQFYAFRWITLLLTQEFNFADSIHIWDTILSDPEGPQE 380
S LLK +DE+LW HLE T+KV PQFYAFRWITLLLTQEF F + IWDT+LS+ G Q+
Sbjct: 349 SDLLKVNDEQLWHHLEFTTKVKPQFYAFRWITLLLTQEFKFESILRIWDTLLSNTFGVQD 408
Query: 381 TLLRICCAMLILIRKRLLAGDFTSNLKLLQNYP-TTNISHLLYVA 424
LLR CCAML+ ++ RLL+GDF +N+KLLQ+YP N+ +LL VA
Sbjct: 409 MLLRFCCAMLLCMKSRLLSGDFVANIKLLQHYPDDVNLEYLLQVA 453
>Medtr4g068180.1 | RabGAP/TBC domain protein | HC |
chr4:25557345-25563029 | 20130731
Length = 455
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 151/344 (43%), Gaps = 68/344 (19%)
Query: 89 LSRKVIDIRELRKLACDGVPDASGIRSTVWKLLLGYLPPDRGLWSSELAKKRTQYKQFKE 148
LS V+ + LR+LA GVPD +R VW+LLLGY PP+ L +KR +Y
Sbjct: 141 LSGTVVILDNLRELAWSGVPDY--MRPKVWRLLLGYEPPNSDRKEGVLGRKRGEY----- 193
Query: 149 EVLMNPSEITWKMYNSLSCDSDEAKCERALLSRSEITHGEHPLSLGKTSVWNQFFQDTEI 208
L C S + S E+ +
Sbjct: 194 ----------------LDCISQYYDIPDSERSDDEVN----------------------M 215
Query: 209 IDQIDRDVMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLF 268
+ QI D RT PD+ FF + Q++L+ IL +A +P YVQG+N+++ P
Sbjct: 216 LRQIAVDCPRTVPDVTFFQ-----QQQVQKSLERILYAWAIRHPASGYVQGINDLVTPFL 270
Query: 269 YVF-------------KNDPDEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRA 315
VF +D + + EAD ++C +LL G +D++ + GI+
Sbjct: 271 VVFISEHLEGGIDDWSMSDLSSDKISNVEADCYWCLSKLLDGMQDHYT----FAQPGIQR 326
Query: 316 TITRLSQLLKEHDEELWRHLEITSKVNPQFYAFRWITLLLTQEFNFADSIHIWDTILSDP 375
+ +L +L++ DE + +H+E QF AFRW LL +E F +WDT L++
Sbjct: 327 LVFKLKELVRRIDEPISQHIEDQGLEFLQF-AFRWFNCLLIREIPFDLITRLWDTYLAEG 385
Query: 376 EGPQETLLRICCAMLILIRKRLLAGDFTSNLKLLQNYPTTNISH 419
+ + L+ I + L+ +L +F + LQ+ PT N +H
Sbjct: 386 DALPDFLVYIFASFLLTWSDKLQRLEFQELVMFLQHLPTQNWTH 429
>Medtr2g099380.1 | RabGAP/TBC domain protein | HC |
chr2:42598039-42603808 | 20130731
Length = 448
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 148/341 (43%), Gaps = 68/341 (19%)
Query: 89 LSRKVIDIRELRKLACDGVPDASGIRSTVWKLLLGYLPPDRGLWSSELAKKRTQYKQFKE 148
LS ++ + +LR+LA GVPD +R TVW+LLLGY P + L +KR +Y
Sbjct: 134 LSGTMVILDKLRELAWSGVPDY--MRPTVWRLLLGYAPTNSDRREGVLRRKRLEY----- 186
Query: 149 EVLMNPSEITWKMYNSLSCDSDEAKCERALLSRSEITHGEHPLSLGKTSVWNQFFQDTEI 208
L C S S EI+ +
Sbjct: 187 ----------------LDCVSQYYDIPDTERSDDEIS----------------------M 208
Query: 209 IDQIDRDVMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLF 268
+ QI D RT PD+ FF Q++L+ IL +A +P YVQG+N+++ P F
Sbjct: 209 LRQIAVDCPRTVPDVAFFQQPQV-----QKSLERILYAWAIRHPASGYVQGINDLVTPFF 263
Query: 269 YVF-------------KNDPDEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRA 315
VF +D + + EAD ++C +LL G +D++ + GI+
Sbjct: 264 VVFLSEYLEGSINNWTMSDLSSDKISNVEADCYWCLSKLLDGMQDHYT----FAQPGIQR 319
Query: 316 TITRLSQLLKEHDEELWRHLEITSKVNPQFYAFRWITLLLTQEFNFADSIHIWDTILSDP 375
+ +L +L++ D+ + H+E QF AFRW LL +E F +WDT L++
Sbjct: 320 LVFKLKELVRRIDDPVSSHMENQGLEFLQF-AFRWFNCLLIREIPFHLVTRLWDTYLAEG 378
Query: 376 EGPQETLLRICCAMLILIRKRLLAGDFTSNLKLLQNYPTTN 416
+ + L+ I + L+ + DF + LQ+ PT N
Sbjct: 379 DALPDFLVYIFASFLLTWSDEVQKLDFQELVMFLQHLPTQN 419
>Medtr4g115090.1 | RabGAP/TBC domain protein | HC |
chr4:47487726-47477753 | 20130731
Length = 666
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 148/323 (45%), Gaps = 67/323 (20%)
Query: 92 KVIDIRELRKLACDGVPDASGIRSTVWKLLLGYLPPDRGLWSSELAK--KRTQYKQFKEE 149
+VID LRK G D +R+ VW LLLGY P D E K K+++Y+ K +
Sbjct: 351 RVIDSEALRKRIFYGGLDHE-LRNEVWGLLLGYYPYDSTYAEREFLKSVKKSEYETIKNQ 409
Query: 150 VLMNPSEITWKMYNSLSCDSDEAKCERALLSRSEITHGEHPLSLGKTSVWNQFFQDTEII 209
W+ S S +AK +F + E
Sbjct: 410 ---------WQ-----SISSAQAK---------------------------RFTKFRERK 428
Query: 210 DQIDRDVMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLFY 269
I++DV+RT + F+ GD N L++IL+ ++ N + Y QGM+++L+P+ +
Sbjct: 429 GLIEKDVVRTDRSLTFYEGDDN---PNVNVLRDILLTYSFYNFDLGYCQGMSDLLSPILF 485
Query: 270 VFKNDPDEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRATITRLSQLLKEHDE 329
V ++ E++ F+CFV L+ NF + + G+ + + LS+L++ D
Sbjct: 486 VMED----------ESEAFWCFVSLMERLGPNFNRDQN----GMHSQLFALSKLVELLDS 531
Query: 330 ELWRHLEITSKVNPQFYAFRWITLLLTQEFNFADSIHIWDTILSDPEGPQETL-LRICCA 388
L + + +N F+ FRWI + +EF + ++ +W+ + + P E L L +C A
Sbjct: 532 PLHNYFKQRDCLN-YFFCFRWILIQFKREFEYEKTMRLWEVLWT--HYPSEHLHLYVCVA 588
Query: 389 MLILIRKRLLAG--DFTSNLKLL 409
+L R +++ DF S LK +
Sbjct: 589 VLKRCRGKIIGEEMDFDSLLKFI 611
>Medtr1g069705.2 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr1:30360034-30352916 | 20130731
Length = 424
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 49/296 (16%)
Query: 99 LRKLACDGVPDASGIRSTVWKLLLG-YLPPDRGLWSSELA-KKRTQYKQFKEEVL-MNPS 155
LR++ GV + I+ VW+ LLG Y P +E+ ++R QY +K E + P
Sbjct: 68 LRRIQRGGVHPS--IKGEVWEFLLGCYDPNSTSEERNEIKQRRRGQYDMWKAECQKIVPV 125
Query: 156 EITWKMYNSLSCDSDEAKCERALLSRSEITHGEHPLSLGKTSVWNQFFQDTEIIDQIDRD 215
+ K + D + +L+ KTS + Q +++ QI D
Sbjct: 126 LGSGKFVTTPLVGDDGQPIDPSLVKI-------------KTSD-KKVVQWLQLLHQIGLD 171
Query: 216 VMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKNDP 275
V+RT + F+ ++ NQ L ++L I+A L+ + YVQGMN++ +PL + +N
Sbjct: 172 VVRTDRALAFYEIEA-----NQSKLWDVLSIYAWLDNDIGYVQGMNDICSPLVILIEN-- 224
Query: 276 DEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRATITRLSQLLKEHDEELWRHL 335
EAD F+CF + R+NF ++ +++G++ + LSQ++K D +L HL
Sbjct: 225 --------EADCFWCFDRAMRRMRENF--RVTATSMGVQTQLGTLSQIMKTVDPKLHHHL 274
Query: 336 EITSKVNPQFYAFRWITLLLTQEFNFADSIHIWD------------TILSDPEGPQ 379
E +AFR + +L +EF+FAD++++W+ T DPEG +
Sbjct: 275 EDLDG-GEYLFAFRMLMVLFRREFSFADTLYLWELMWGMEYNPNIFTKYEDPEGAK 329
>Medtr1g069705.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr1:30360021-30352911 | 20130731
Length = 424
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 49/296 (16%)
Query: 99 LRKLACDGVPDASGIRSTVWKLLLG-YLPPDRGLWSSELA-KKRTQYKQFKEEVL-MNPS 155
LR++ GV + I+ VW+ LLG Y P +E+ ++R QY +K E + P
Sbjct: 68 LRRIQRGGVHPS--IKGEVWEFLLGCYDPNSTSEERNEIKQRRRGQYDMWKAECQKIVPV 125
Query: 156 EITWKMYNSLSCDSDEAKCERALLSRSEITHGEHPLSLGKTSVWNQFFQDTEIIDQIDRD 215
+ K + D + +L+ KTS + Q +++ QI D
Sbjct: 126 LGSGKFVTTPLVGDDGQPIDPSLVKI-------------KTSD-KKVVQWLQLLHQIGLD 171
Query: 216 VMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKNDP 275
V+RT + F+ ++ NQ L ++L I+A L+ + YVQGMN++ +PL + +N
Sbjct: 172 VVRTDRALAFYEIEA-----NQSKLWDVLSIYAWLDNDIGYVQGMNDICSPLVILIEN-- 224
Query: 276 DEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRATITRLSQLLKEHDEELWRHL 335
EAD F+CF + R+NF ++ +++G++ + LSQ++K D +L HL
Sbjct: 225 --------EADCFWCFDRAMRRMRENF--RVTATSMGVQTQLGTLSQIMKTVDPKLHHHL 274
Query: 336 EITSKVNPQFYAFRWITLLLTQEFNFADSIHIWD------------TILSDPEGPQ 379
E +AFR + +L +EF+FAD++++W+ T DPEG +
Sbjct: 275 EDLDG-GEYLFAFRMLMVLFRREFSFADTLYLWELMWGMEYNPNIFTKYEDPEGAK 329
>Medtr4g081110.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr4:31396490-31401093 | 20130731
Length = 436
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 113 IRSTVWKLLLGYLPPDRGLWSSELAKKR--TQYKQFKEEVL-MNPSEITWKMYNSLSCDS 169
IR VW+ LLG P E ++R TQY ++KEE + P + + +
Sbjct: 68 IRGEVWEFLLGCYEPTSTFEEREEIRQRRRTQYAEWKEECRQLFPLVGSGRFITAPVVTD 127
Query: 170 D-----------EAKCERALLSRSEITHGEHPLSLGKTSVWNQFFQDTEIIDQIDRDVMR 218
D E E ++ + P + K + Q + QI DV+R
Sbjct: 128 DGVPVQDPLVLLENNPENGVIVPPQEVGAPSPNNTAKKVTDKKVIQWMLTLHQIGLDVIR 187
Query: 219 THPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKNDPDEE 278
T + F+ +KL +IL ++A+++ V Y QGM+++ +P+ + +
Sbjct: 188 TDRTLVFYEKKENLSKL-----WDILAVYARIDNDVGYGQGMSDLCSPMIILLDD----- 237
Query: 279 NSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRATITRLSQLLKEHDEELWRHLEIT 338
EAD+F+CF L+ R NF + N++VG+ + L+ + + D +L +H+E
Sbjct: 238 -----EADSFWCFERLMRRLRGNF--RCTNNSVGVETQLNNLASITQVIDPKLHQHIEHI 290
Query: 339 SKVNPQFYAFRWITLLLTQEFNFADSIHIWDTI 371
+ +AFR + +L +EF+F DS+++W+ +
Sbjct: 291 GGGD-YLFAFRMLMVLFRREFSFCDSLYLWEMM 322
>Medtr2g083220.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr2:34944012-34938150 | 20130731
Length = 443
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 97 RELRKLACDGVPDASGIRSTVWKLLLGYLPPDRGLWSSE--LAKKRTQYKQFKEEVL-MN 153
+ LR++ GV + IR VW+ LLG P + ++R QY +K+E +
Sbjct: 55 KTLRRIYRGGVHPS--IRGEVWEFLLGCYDPKSTFDERDQIRERRRIQYATWKKECRQLF 112
Query: 154 PSEITWKMYNS--------------LSCDSDEAKCERALLSRSEITHGEHPLSLGKTSVW 199
P + + S + + ++AK LL + ++ +
Sbjct: 113 PLVGSGRFITSPVITDDGQPIQDPMIMPEGNQAKGLAVLLQDNNRPSSIDSVNNLENVTD 172
Query: 200 NQFFQDTEIIDQIDRDVMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQG 259
+ Q + QI DV+RT + F+ +KL +IL ++A ++ V Y QG
Sbjct: 173 KKLIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKL-----WDILAVYAWIDKEVGYGQG 227
Query: 260 MNEVLAPLFYVFKNDPDEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRATITR 319
M+++ +P+ + + EAD F+CF L+ R NF + +G+ A ++
Sbjct: 228 MSDLCSPMIILLDD----------EADAFWCFERLMRRLRGNF--RCTGRTLGVEAQLSN 275
Query: 320 LSQLLKEHDEELWRHLEITSKVNPQFYAFRWITLLLTQEFNFADSIHIWDTI 371
L+ + + D +L +H+E + F AFR + +L +EF+F DS+++W+ +
Sbjct: 276 LASITQVIDPKLHKHIEHIGGGDYVF-AFRMLMVLFRREFSFCDSLYLWEMM 326
>Medtr2g099380.2 | RabGAP/TBC domain protein | HC |
chr2:42598043-42602163 | 20130731
Length = 346
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 67/257 (26%)
Query: 89 LSRKVIDIRELRKLACDGVPDASGIRSTVWKLLLGYLPPDRGLWSSELAKKRTQYKQFKE 148
LS ++ + +LR+LA GVPD +R TVW+LLLGY P + L +KR +Y
Sbjct: 134 LSGTMVILDKLRELAWSGVPDY--MRPTVWRLLLGYAPTNSDRREGVLRRKRLEY----- 186
Query: 149 EVLMNPSEITWKMYNSLSCDSDEAKCERALLSRSEITHGEHPLSLGKTSVWNQFFQDTEI 208
L C S S EI+ +
Sbjct: 187 ----------------LDCVSQYYDIPDTERSDDEIS----------------------M 208
Query: 209 IDQIDRDVMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLF 268
+ QI D RT PD+ FF Q ++ Q++L+ IL +A +P YVQG+N+++ P F
Sbjct: 209 LRQIAVDCPRTVPDVAFF----QQPQV-QKSLERILYAWAIRHPASGYVQGINDLVTPFF 263
Query: 269 YVF-------------KNDPDEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRA 315
VF +D + + EAD ++C +LL G +D++ + GI+
Sbjct: 264 VVFLSEYLEGSINNWTMSDLSSDKISNVEADCYWCLSKLLDGMQDHYT----FAQPGIQR 319
Query: 316 TITRLSQLLKEHDEELW 332
+ +L +L++ D L+
Sbjct: 320 LVFKLKELVRRIDGNLF 336
>Medtr2g099185.1 | Rab GTPase activator | HC |
chr2:42550462-42544781 | 20130731
Length = 671
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 84/159 (52%), Gaps = 23/159 (14%)
Query: 215 DVMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKND 274
DV+RT + F+ A+++ +IL ++A ++P Y QGM+++L+P +F+++
Sbjct: 373 DVVRTDNHLEFYEDRRNLARMS-----DILAVYAWVDPATGYCQGMSDLLSPFVVIFEDN 427
Query: 275 PDEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRATITRLSQLLKEHDEELWRH 334
AD F+CF LL R+NF + + + L +L+ D+EL+ H
Sbjct: 428 ----------ADAFWCFEMLLRRMRENFKME---GPTRVMKQLRALWHILELSDKELFAH 474
Query: 335 LEITSKVNPQ--FYAFRWITLLLTQEFNFADSIHIWDTI 371
L SK+ + +AFR + +L +E +F +++ +W+ +
Sbjct: 475 L---SKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMM 510
>Medtr2g099185.2 | Rab GTPase activator | HC |
chr2:42550462-42545186 | 20130731
Length = 525
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 83/158 (52%), Gaps = 23/158 (14%)
Query: 215 DVMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKND 274
DV+RT + F+ A+++ +IL ++A ++P Y QGM+++L+P +F+++
Sbjct: 373 DVVRTDNHLEFYEDRRNLARMS-----DILAVYAWVDPATGYCQGMSDLLSPFVVIFEDN 427
Query: 275 PDEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRATITRLSQLLKEHDEELWRH 334
AD F+CF LL R+NF + + + L +L+ D+EL+ H
Sbjct: 428 ----------ADAFWCFEMLLRRMRENFKME---GPTRVMKQLRALWHILELSDKELFAH 474
Query: 335 LEITSKVNPQ--FYAFRWITLLLTQEFNFADSIHIWDT 370
L SK+ + +AFR + +L +E +F +++ +W+
Sbjct: 475 L---SKIGAESLHFAFRMLLVLFRRELSFNEALSMWEV 509
>Medtr2g099185.3 | Rab GTPase activator | HC |
chr2:42550766-42545779 | 20130731
Length = 530
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 83/157 (52%), Gaps = 23/157 (14%)
Query: 215 DVMRTHPDMHFFSGDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKND 274
DV+RT + F+ A+++ +IL ++A ++P Y QGM+++L+P +F+++
Sbjct: 378 DVVRTDNHLEFYEDRRNLARMS-----DILAVYAWVDPATGYCQGMSDLLSPFVVIFEDN 432
Query: 275 PDEENSAFAEADTFFCFVELLSGFRDNFVQQLDNSAVGIRATITRLSQLLKEHDEELWRH 334
AD F+CF LL R+NF + + + L +L+ D+EL+ H
Sbjct: 433 ----------ADAFWCFEMLLRRMRENFKME---GPTRVMKQLRALWHILELSDKELFAH 479
Query: 335 LEITSKVNPQ--FYAFRWITLLLTQEFNFADSIHIWD 369
L SK+ + +AFR + +L +E +F +++ +W+
Sbjct: 480 L---SKIGAESLHFAFRMLLVLFRRELSFNEALSMWE 513
>Medtr3g092100.1 | Rab GTPase activator | HC |
chr3:42056500-42051571 | 20130731
Length = 551
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 33/189 (17%)
Query: 240 LKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKNDPDEENSAFAEADTFFCFVELLSGFR 299
L IL +A +P + Y QGM+++L+P+ V D + F+CFV + R
Sbjct: 342 LVAILEAYALYDPEIGYCQGMSDLLSPIICVVSED----------HEAFWCFVGFMKKAR 391
Query: 300 DNFVQQLDNSAVGIRATITRLSQLLKEHDEELWRHLEITSKVNPQFYAFRWITLLLTQEF 359
NF +LD VGIR + +++++K D L+RHLE + F+ +R + +L +E
Sbjct: 392 QNF--RLDE--VGIRRQLDIVAKIIKFKDSHLFRHLE-KLQAEDCFFVYRMVVVLFRREL 446
Query: 360 NFADSIHIWDTILSDPEG------------------PQETLLRICCAMLILIRKRLLAGD 401
F ++ +W+ + +D P + LL A +L R++L+
Sbjct: 447 TFEQTLCLWEVMWADQAAIRAGIGKSPWSRIRQRAPPTDDLLLFAIAASVLQRRKLILEK 506
Query: 402 FTSNLKLLQ 410
++S +L+
Sbjct: 507 YSSMDDILK 515
>Medtr1g007590.2 | Rab GTPase activator | HC | chr1:448550-444409 |
20130731
Length = 496
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 33/183 (18%)
Query: 240 LKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKNDPDEENSAFAEADTFFCFVELLSGFR 299
L IL +A + + Y QGM+++L+P+ + D + F+CFV + R
Sbjct: 292 LVAILEAYALYDSEIGYCQGMSDLLSPIVSIISED----------HEAFWCFVGFMKKAR 341
Query: 300 DNFVQQLDNSAVGIRATITRLSQLLKEHDEELWRHLEITSKVNPQFYAFRWITLLLTQEF 359
NF +LD VGIR + +++++K D L++HLE + F+ +R + +L +E
Sbjct: 342 QNF--RLDE--VGIRRQLELVAKIIKYKDGHLFKHLE-KLQAEDCFFVYRMVVVLFRREL 396
Query: 360 NFADSIHIWDTILSDPEG------------------PQETLLRICCAMLILIRKRLLAGD 401
F +I +W+ + +D P + LL A +L R++L+
Sbjct: 397 TFEQTICLWEVMWADQAAIRAGIGHSAWNKVRKRAPPTDDLLLYAIAASVLQRRKLIIEK 456
Query: 402 FTS 404
++S
Sbjct: 457 YSS 459
>Medtr1g007590.1 | Rab GTPase activator | HC | chr1:448550-444327 |
20130731
Length = 591
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 33/183 (18%)
Query: 240 LKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKNDPDEENSAFAEADTFFCFVELLSGFR 299
L IL +A + + Y QGM+++L+P+ + D + F+CFV + R
Sbjct: 387 LVAILEAYALYDSEIGYCQGMSDLLSPIVSIISED----------HEAFWCFVGFMKKAR 436
Query: 300 DNFVQQLDNSAVGIRATITRLSQLLKEHDEELWRHLEITSKVNPQFYAFRWITLLLTQEF 359
NF +LD VGIR + +++++K D L++HLE + F+ +R + +L +E
Sbjct: 437 QNF--RLDE--VGIRRQLELVAKIIKYKDGHLFKHLE-KLQAEDCFFVYRMVVVLFRREL 491
Query: 360 NFADSIHIWDTILSDPEG------------------PQETLLRICCAMLILIRKRLLAGD 401
F +I +W+ + +D P + LL A +L R++L+
Sbjct: 492 TFEQTICLWEVMWADQAAIRAGIGHSAWNKVRKRAPPTDDLLLYAIAASVLQRRKLIIEK 551
Query: 402 FTS 404
++S
Sbjct: 552 YSS 554
>Medtr6g016590.1 | RabGAP/TBC domain protein | HC |
chr6:6292883-6289095 | 20130731
Length = 367
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 25/262 (9%)
Query: 174 CERALLSRSEITHGEHPLSLGKTSVWNQFFQDTEIIDQID--RDVMRTHPDMHFFSGDSQ 231
C R L+ ++ G L L V+ Q ++D RD+ RT P FF +
Sbjct: 91 CLRGLVW--QLISGSRDLLLMNPGVYEQLVIYETSASELDIIRDISRTFPSHVFFQ---K 145
Query: 232 FAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKNDPDEENSAFAEADTFFCF 291
Q +L N+L ++ + V YVQGM LA L ++ +E D F+
Sbjct: 146 RHGPGQRSLYNVLKAYSVFDREVGYVQGMG-FLAGLLLLY----------MSEEDAFWLL 194
Query: 292 VELLSGFRDNFVQQLDNSAVG-IRATITRLSQLLKEHDEELWRHLEITSKVNPQFYAFRW 350
V LL G ++ L + + ++ + + +L++EH +L H +NP YA +W
Sbjct: 195 VALLKGAVHAPMEGLYLAGLPLVQQYLFQFERLVREHLPKLGEHF-TQEMINPSMYASQW 253
Query: 351 ITLLLTQEFNFADSIHIWDTILSDPEGPQETLLRICCAMLILIRKRLLAGDFTSNLKLLQ 410
+ + F F ++ IWD L EG + + ++ A+L L+ F + L+
Sbjct: 254 FITVFSYSFPFHLALRIWDVFLY--EG-VKIVFKVGLALLKYCHDDLVKLPFEKLIHALK 310
Query: 411 NYP--TTNISHLLYVANKFRVQ 430
N+P N LL +A +++
Sbjct: 311 NFPEDAMNPDTLLPLAYSIKIR 332
>Medtr4g127450.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr4:52908354-52902885 | 20130731
Length = 836
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 28/167 (16%)
Query: 113 IRSTVWKLLLGYLPPDRGLWSSE-----LAKKRTQYKQFKEEVLMNPSEITWKMYNSLSC 167
+R W++ LG LP S + A R +Y + +L++P
Sbjct: 38 LRGLQWRINLGVLPSSSSSTSVDDLRRATANSRRRYASLRGRLLVDPH-----------V 86
Query: 168 DSDEAKCERALLSRSEITHGEHPLSLGKTSVWNQFFQDTEIIDQIDRDVMRTHPDMHFFS 227
DE+ ++ ++PLS S W +FF + E+ +D+D+ R +P+
Sbjct: 87 PKDESSSPNLVM--------DNPLSQNPNSTWGRFFHNAELERMVDQDLSRLYPEH---- 134
Query: 228 GDSQFAKLNQEALKNILIIFAKLNPGVRYVQGMNEVLAPLFYVFKND 274
G+ K Q L+ IL+++ +P Y QGM+E+LAPL YV + D
Sbjct: 135 GNYFQTKGCQGILRRILLLWCLRHPDCGYRQGMHELLAPLLYVLQVD 181
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 33/180 (18%)
Query: 282 FAEADTFFCFVELLSGFRDNFVQQ-------LDNSAVGIRATI---TRLSQLLKEHDEEL 331
F E D + F L++G + + S G+ I L LL D L
Sbjct: 270 FIEHDAYCMFEALMNGAHGSVAMADFFSYSPVAGSHTGLPPVIEASAALYHLLSHVDSSL 329
Query: 332 WRHLEITSKVNPQFYAFRWITLLLTQEFNFADSIHIWDTI-LSD-------PEGPQETLL 383
+ HL + V PQ++A RW+ +L +EF+ + + +WD I LSD E +T
Sbjct: 330 YSHL-VDLGVEPQYFALRWLRVLFGREFSLDNLLIVWDEIFLSDNSKMEKHAEDNTDTCF 388
Query: 384 R------------ICCAMLILIRKRLLAGDF-TSNLKLLQNYP-TTNISHLLYVANKFRV 429
R I AML+ IR LLA + T+ L+ L ++P TNI L+ A +
Sbjct: 389 RIFHSSRGAFISAIAVAMLLHIRSSLLATENPTTCLQRLLSFPENTNIKKLIEKAKSLQT 448
>Medtr2g037930.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr2:16450205-16455298 | 20130731
Length = 869
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 188 EHPLSLGKTSVWNQFFQDTEIIDQIDRDVMRTHPDMHFFSGDSQFAKLN-QEALKNILII 246
++PLS S W++FF++ E+ +D+D+ R +P+ + F Q L+ IL++
Sbjct: 93 DNPLSQNPDSTWSRFFRNAELERLVDQDLSRLYPEHGSY-----FQTPGCQGMLRRILLL 147
Query: 247 FAKLNPGVRYVQGMNEVLAPLFYVFKND 274
+ +P Y QGM+E+LAP YV + D
Sbjct: 148 WCLKHPDCGYRQGMHELLAPFLYVLQVD 175
>Medtr4g127450.2 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr4:52905793-52902885 | 20130731
Length = 670
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 33/180 (18%)
Query: 282 FAEADTFFCFVELLSGFRDNFVQQ-------LDNSAVGIRATI---TRLSQLLKEHDEEL 331
F E D + F L++G + + S G+ I L LL D L
Sbjct: 104 FIEHDAYCMFEALMNGAHGSVAMADFFSYSPVAGSHTGLPPVIEASAALYHLLSHVDSSL 163
Query: 332 WRHLEITSKVNPQFYAFRWITLLLTQEFNFADSIHIWDTI-LSD-------PEGPQETLL 383
+ HL + V PQ++A RW+ +L +EF+ + + +WD I LSD E +T
Sbjct: 164 YSHL-VDLGVEPQYFALRWLRVLFGREFSLDNLLIVWDEIFLSDNSKMEKHAEDNTDTCF 222
Query: 384 R------------ICCAMLILIRKRLLAGDF-TSNLKLLQNYP-TTNISHLLYVANKFRV 429
R I AML+ IR LLA + T+ L+ L ++P TNI L+ A +
Sbjct: 223 RIFHSSRGAFISAIAVAMLLHIRSSLLATENPTTCLQRLLSFPENTNIKKLIEKAKSLQT 282
>Medtr4g127450.3 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr4:52908354-52902885 | 20130731
Length = 715
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 33/180 (18%)
Query: 282 FAEADTFFCFVELLSGFRDNFVQQ-------LDNSAVGIRATI---TRLSQLLKEHDEEL 331
F E D + F L++G + + S G+ I L LL D L
Sbjct: 149 FIEHDAYCMFEALMNGAHGSVAMADFFSYSPVAGSHTGLPPVIEASAALYHLLSHVDSSL 208
Query: 332 WRHLEITSKVNPQFYAFRWITLLLTQEFNFADSIHIWDTI-LSD-------PEGPQETLL 383
+ HL + V PQ++A RW+ +L +EF+ + + +WD I LSD E +T
Sbjct: 209 YSHL-VDLGVEPQYFALRWLRVLFGREFSLDNLLIVWDEIFLSDNSKMEKHAEDNTDTCF 267
Query: 384 R------------ICCAMLILIRKRLLAGDF-TSNLKLLQNYP-TTNISHLLYVANKFRV 429
R I AML+ IR LLA + T+ L+ L ++P TNI L+ A +
Sbjct: 268 RIFHSSRGAFISAIAVAMLLHIRSSLLATENPTTCLQRLLSFPENTNIKKLIEKAKSLQT 327