Miyakogusa Predicted Gene
- Lj4g3v2603650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2603650.1 tr|I0Z5S5|I0Z5S5_9CHLO Terpenoid cyclases/Protein
prenyltransferase (Fragment) OS=Coccomyxa
subellip,26.7,0.00000000002,Terpenoid cyclases/Protein
prenyltransferases,Terpenoid cyclases/protein prenyltransferase
alpha-alp,CUFF.51215.1
(313 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g111160.1 | RAB geranylgeranyl transferase beta subunit 2 ... 590 e-169
Medtr1g111160.3 | RAB geranylgeranyl transferase beta subunit 2 ... 590 e-169
Medtr1g111160.7 | RAB geranylgeranyl transferase beta subunit 2 ... 532 e-151
Medtr1g111160.4 | RAB geranylgeranyl transferase beta subunit 2 ... 480 e-136
Medtr1g111160.6 | RAB geranylgeranyl transferase beta subunit 2 ... 480 e-136
Medtr1g111160.2 | RAB geranylgeranyl transferase beta subunit 2 ... 454 e-128
Medtr1g111160.5 | RAB geranylgeranyl transferase beta subunit 2 ... 454 e-128
Medtr7g024540.1 | geranylgeranyltransferase type I beta subunit ... 152 3e-37
Medtr6g007165.1 | farnesyltranstransferase subunit beta | HC | c... 137 1e-32
Medtr8g085230.1 | RAB geranylgeranyl transferase beta-subunit, p... 70 4e-12
>Medtr1g111160.1 | RAB geranylgeranyl transferase beta subunit 2 |
HC | chr1:50207475-50203019 | 20130731
Length = 313
Score = 590 bits (1521), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/313 (90%), Positives = 300/313 (95%)
Query: 1 MGELVSEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTALDLLGKLHTVDVDEVVSW 60
MG+LV+EKHV+YILSV+K+KD+FESVVMEHLRMNGAYWGLT L LLGKL TVDV EVVSW
Sbjct: 1 MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSW 60
Query: 61 VMSCQDESGGFAGNVGHDPHILYTLSAVQVLALFDKLDAIDVDRVTNYIVSLQNEDGSFS 120
+MSCQ + GGF GNVGHDPHILYTLSAVQVLALF+KLD ID D+VTNYIV LQNEDGSFS
Sbjct: 61 IMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFS 120
Query: 121 GDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180
GD WGEVDTRFSYIAICCLS+L RLD+INV+KAVKYIISC+NMDGGFGCTPGGESHAGQI
Sbjct: 121 GDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGESHAGQI 180
Query: 181 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
FCCVGALAI GSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
Query: 241 VHWISKEKLIKFILDCQDTENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYA 300
VHWISKEKLIKFILDCQDT+NGGISDRPDDAVDVFHTYFGVAGLSLLEYPG+KPIDPAYA
Sbjct: 241 VHWISKEKLIKFILDCQDTDNGGISDRPDDAVDVFHTYFGVAGLSLLEYPGVKPIDPAYA 300
Query: 301 LPVDVVNRIFFSK 313
LPV+VVNRIFFSK
Sbjct: 301 LPVEVVNRIFFSK 313
>Medtr1g111160.3 | RAB geranylgeranyl transferase beta subunit 2 |
HC | chr1:50207486-50203019 | 20130731
Length = 313
Score = 590 bits (1521), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/313 (90%), Positives = 300/313 (95%)
Query: 1 MGELVSEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTALDLLGKLHTVDVDEVVSW 60
MG+LV+EKHV+YILSV+K+KD+FESVVMEHLRMNGAYWGLT L LLGKL TVDV EVVSW
Sbjct: 1 MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSW 60
Query: 61 VMSCQDESGGFAGNVGHDPHILYTLSAVQVLALFDKLDAIDVDRVTNYIVSLQNEDGSFS 120
+MSCQ + GGF GNVGHDPHILYTLSAVQVLALF+KLD ID D+VTNYIV LQNEDGSFS
Sbjct: 61 IMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFS 120
Query: 121 GDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180
GD WGEVDTRFSYIAICCLS+L RLD+INV+KAVKYIISC+NMDGGFGCTPGGESHAGQI
Sbjct: 121 GDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGESHAGQI 180
Query: 181 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
FCCVGALAI GSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
Query: 241 VHWISKEKLIKFILDCQDTENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGLKPIDPAYA 300
VHWISKEKLIKFILDCQDT+NGGISDRPDDAVDVFHTYFGVAGLSLLEYPG+KPIDPAYA
Sbjct: 241 VHWISKEKLIKFILDCQDTDNGGISDRPDDAVDVFHTYFGVAGLSLLEYPGVKPIDPAYA 300
Query: 301 LPVDVVNRIFFSK 313
LPV+VVNRIFFSK
Sbjct: 301 LPVEVVNRIFFSK 313
>Medtr1g111160.7 | RAB geranylgeranyl transferase beta subunit 2 |
HC | chr1:50207475-50203040 | 20130731
Length = 336
Score = 532 bits (1370), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/289 (88%), Positives = 272/289 (94%)
Query: 1 MGELVSEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTALDLLGKLHTVDVDEVVSW 60
MG+LV+EKHV+YILSV+K+KD+FESVVMEHLRMNGAYWGLT L LLGKL TVDV EVVSW
Sbjct: 1 MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSW 60
Query: 61 VMSCQDESGGFAGNVGHDPHILYTLSAVQVLALFDKLDAIDVDRVTNYIVSLQNEDGSFS 120
+MSCQ + GGF GNVGHDPHILYTLSAVQVLALF+KLD ID D+VTNYIV LQNEDGSFS
Sbjct: 61 IMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFS 120
Query: 121 GDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180
GD WGEVDTRFSYIAICCLS+L RLD+INV+KAVKYIISC+NMDGGFGCTPGGESHAGQI
Sbjct: 121 GDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGESHAGQI 180
Query: 181 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
FCCVGALAI GSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
Query: 241 VHWISKEKLIKFILDCQDTENGGISDRPDDAVDVFHTYFGVAGLSLLEY 289
VHWISKEKLIKFILDCQDT+NGGISDRPDDAVDVFHTYFGVAG L +
Sbjct: 241 VHWISKEKLIKFILDCQDTDNGGISDRPDDAVDVFHTYFGVAGNVFLFF 289
>Medtr1g111160.4 | RAB geranylgeranyl transferase beta subunit 2 |
HC | chr1:50207475-50203019 | 20130731
Length = 259
Score = 480 bits (1235), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/257 (89%), Positives = 244/257 (94%)
Query: 1 MGELVSEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTALDLLGKLHTVDVDEVVSW 60
MG+LV+EKHV+YILSV+K+KD+FESVVMEHLRMNGAYWGLT L LLGKL TVDV EVVSW
Sbjct: 1 MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSW 60
Query: 61 VMSCQDESGGFAGNVGHDPHILYTLSAVQVLALFDKLDAIDVDRVTNYIVSLQNEDGSFS 120
+MSCQ + GGF GNVGHDPHILYTLSAVQVLALF+KLD ID D+VTNYIV LQNEDGSFS
Sbjct: 61 IMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFS 120
Query: 121 GDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180
GD WGEVDTRFSYIAICCLS+L RLD+INV+KAVKYIISC+NMDGGFGCTPGGESHAGQI
Sbjct: 121 GDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGESHAGQI 180
Query: 181 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
FCCVGALAI GSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
Query: 241 VHWISKEKLIKFILDCQ 257
VHWISKEKLIKFILDCQ
Sbjct: 241 VHWISKEKLIKFILDCQ 257
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 83/160 (51%)
Query: 103 DRVTNYIVSLQNEDGSFSGDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKN 162
++ YI+S+Q + SF + +Y + L +L +LD ++V + V +I+SC++
Sbjct: 7 EKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSWIMSCQH 66
Query: 163 MDGGFGCTPGGESHAGQIFCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKL 222
+GGFG G + H V LA+ LD++D D + ++ Q + G +G
Sbjct: 67 DEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFSGDIWGE 126
Query: 223 PDVCYSWWVLSSLIMIDRVHWISKEKLIKFILDCQDTENG 262
D +S+ + L ++ R+ I+ +K +K+I+ CQ+ + G
Sbjct: 127 VDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGG 166
>Medtr1g111160.6 | RAB geranylgeranyl transferase beta subunit 2 |
HC | chr1:50207475-50203019 | 20130731
Length = 259
Score = 480 bits (1235), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/257 (89%), Positives = 244/257 (94%)
Query: 1 MGELVSEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTALDLLGKLHTVDVDEVVSW 60
MG+LV+EKHV+YILSV+K+KD+FESVVMEHLRMNGAYWGLT L LLGKL TVDV EVVSW
Sbjct: 1 MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSW 60
Query: 61 VMSCQDESGGFAGNVGHDPHILYTLSAVQVLALFDKLDAIDVDRVTNYIVSLQNEDGSFS 120
+MSCQ + GGF GNVGHDPHILYTLSAVQVLALF+KLD ID D+VTNYIV LQNEDGSFS
Sbjct: 61 IMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFS 120
Query: 121 GDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180
GD WGEVDTRFSYIAICCLS+L RLD+INV+KAVKYIISC+NMDGGFGCTPGGESHAGQI
Sbjct: 121 GDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGESHAGQI 180
Query: 181 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
FCCVGALAI GSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
Query: 241 VHWISKEKLIKFILDCQ 257
VHWISKEKLIKFILDCQ
Sbjct: 241 VHWISKEKLIKFILDCQ 257
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 83/160 (51%)
Query: 103 DRVTNYIVSLQNEDGSFSGDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKN 162
++ YI+S+Q + SF + +Y + L +L +LD ++V + V +I+SC++
Sbjct: 7 EKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSWIMSCQH 66
Query: 163 MDGGFGCTPGGESHAGQIFCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKL 222
+GGFG G + H V LA+ LD++D D + ++ Q + G +G
Sbjct: 67 DEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFSGDIWGE 126
Query: 223 PDVCYSWWVLSSLIMIDRVHWISKEKLIKFILDCQDTENG 262
D +S+ + L ++ R+ I+ +K +K+I+ CQ+ + G
Sbjct: 127 VDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGG 166
>Medtr1g111160.2 | RAB geranylgeranyl transferase beta subunit 2 |
HC | chr1:50207475-50203019 | 20130731
Length = 253
Score = 454 bits (1169), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/252 (86%), Positives = 233/252 (92%)
Query: 1 MGELVSEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTALDLLGKLHTVDVDEVVSW 60
MG+LV+EKHV+YILSV+K+KD+FESVVMEHLRMNGAYWGLT L LLGKL TVDV EVVSW
Sbjct: 1 MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSW 60
Query: 61 VMSCQDESGGFAGNVGHDPHILYTLSAVQVLALFDKLDAIDVDRVTNYIVSLQNEDGSFS 120
+MSCQ + GGF GNVGHDPHILYTLSAVQVLALF+KLD ID D+VTNYIV LQNEDGSFS
Sbjct: 61 IMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFS 120
Query: 121 GDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180
GD WGEVDTRFSYIAICCLS+L RLD+INV+KAVKYIISC+NMDGGFGCTPGGESHAGQI
Sbjct: 121 GDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGESHAGQI 180
Query: 181 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
FCCVGALAI GSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
Query: 241 VHWISKEKLIKF 252
VHWI + F
Sbjct: 241 VHWIRHRQWWDF 252
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 83/160 (51%)
Query: 103 DRVTNYIVSLQNEDGSFSGDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKN 162
++ YI+S+Q + SF + +Y + L +L +LD ++V + V +I+SC++
Sbjct: 7 EKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSWIMSCQH 66
Query: 163 MDGGFGCTPGGESHAGQIFCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKL 222
+GGFG G + H V LA+ LD++D D + ++ Q + G +G
Sbjct: 67 DEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFSGDIWGE 126
Query: 223 PDVCYSWWVLSSLIMIDRVHWISKEKLIKFILDCQDTENG 262
D +S+ + L ++ R+ I+ +K +K+I+ CQ+ + G
Sbjct: 127 VDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGG 166
>Medtr1g111160.5 | RAB geranylgeranyl transferase beta subunit 2 |
HC | chr1:50207475-50203019 | 20130731
Length = 253
Score = 454 bits (1169), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/252 (86%), Positives = 233/252 (92%)
Query: 1 MGELVSEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTALDLLGKLHTVDVDEVVSW 60
MG+LV+EKHV+YILSV+K+KD+FESVVMEHLRMNGAYWGLT L LLGKL TVDV EVVSW
Sbjct: 1 MGDLVAEKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSW 60
Query: 61 VMSCQDESGGFAGNVGHDPHILYTLSAVQVLALFDKLDAIDVDRVTNYIVSLQNEDGSFS 120
+MSCQ + GGF GNVGHDPHILYTLSAVQVLALF+KLD ID D+VTNYIV LQNEDGSFS
Sbjct: 61 IMSCQHDEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFS 120
Query: 121 GDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180
GD WGEVDTRFSYIAICCLS+L RLD+INV+KAVKYIISC+NMDGGFGCTPGGESHAGQI
Sbjct: 121 GDIWGEVDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGGFGCTPGGESHAGQI 180
Query: 181 FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
FCCVGALAI GSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181 FCCVGALAIAGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240
Query: 241 VHWISKEKLIKF 252
VHWI + F
Sbjct: 241 VHWIRHRQWWDF 252
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 83/160 (51%)
Query: 103 DRVTNYIVSLQNEDGSFSGDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKN 162
++ YI+S+Q + SF + +Y + L +L +LD ++V + V +I+SC++
Sbjct: 7 EKHVQYILSVQKKKDSFESVVMEHLRMNGAYWGLTTLHLLGKLDTVDVHEVVSWIMSCQH 66
Query: 163 MDGGFGCTPGGESHAGQIFCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKL 222
+GGFG G + H V LA+ LD++D D + ++ Q + G +G
Sbjct: 67 DEGGFGGNVGHDPHILYTLSAVQVLALFNKLDVIDADKVTNYIVGLQNEDGSFSGDIWGE 126
Query: 223 PDVCYSWWVLSSLIMIDRVHWISKEKLIKFILDCQDTENG 262
D +S+ + L ++ R+ I+ +K +K+I+ CQ+ + G
Sbjct: 127 VDTRFSYIAICCLSLLHRLDRINVDKAVKYIISCQNMDGG 166
>Medtr7g024540.1 | geranylgeranyltransferase type I beta subunit |
HC | chr7:8090726-8084951 | 20130731
Length = 355
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 42/311 (13%)
Query: 23 FESVVMEHLRMNGAYWGLTALDLLGKLHTVDVDEVVSWVMSCQDESG-----------GF 71
+ES + HL + AY+ +++LD+L LH V+ + V +WV+S Q + G GF
Sbjct: 35 YESQEINHLTL--AYFVISSLDILNSLHLVEKEAVANWVLSFQVQRGTTNDPNNGQFYGF 92
Query: 72 AGN-----------VGH--DPHILYTLSAVQVLAL--FDKLDAIDVDRVTNYIVSLQNED 116
G+ V H + H+ T A+ +L + +D ++ + +LQ D
Sbjct: 93 HGSKTSQFPPDENGVFHHNNSHLASTYCALAILKIVGYDLSSLDSESMSSS-MKNLQQPD 151
Query: 117 GSFSG-DTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKNMDGGFGCTPGGES 175
GSF GE D RF Y A +L + ++ EK YI++C++ DGGFG PG ES
Sbjct: 152 GSFMPIHIGGETDLRFVYCAAAICFMLDNWNGMDKEKVKDYILNCQSYDGGFGLVPGAES 211
Query: 176 HAGQIFCCVGALAITGSLD-----------LVDKDLLGWWLCERQVKSGGLNGRPEKLPD 224
H G +C + +L + G ++ L+D LL W+ +RQ GG GRP K D
Sbjct: 212 HGGATYCAIASLRLMGYVEDNVLSSCNLSSLIDLPLLLDWILQRQGTDGGFQGRPNKSTD 271
Query: 225 VCYSWWVLSSLIMIDRVHWISKEKLIKFILDCQDTENGGISDRPDDAVDVFHTYFGVAGL 284
CY++W+ L ++ +++ + L F+L CQ + GG S P D D++H+Y+G A
Sbjct: 272 TCYAFWIGGVLRILGGCNFVDNKALRGFLLSCQ-YKYGGFSKFPGDFPDLYHSYYGFAAF 330
Query: 285 SLLEYPGLKPI 295
SLLE GLK +
Sbjct: 331 SLLEESGLKSL 341
>Medtr6g007165.1 | farnesyltranstransferase subunit beta | HC |
chr6:1486507-1479409 | 20130731
Length = 448
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 142/274 (51%), Gaps = 11/274 (4%)
Query: 1 MGELVSEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTALDLLGKLHTVDV-DEVVS 59
M EL +KH+ Y LS R V++ R YW + A+ LLG+ D+ D V
Sbjct: 44 MLELQRDKHIEY-LSKGLRHLGSAFSVLDANRPWLCYWIIHAIALLGETIDDDLEDNTVD 102
Query: 60 WVMSCQDESGGFAGNVGHDPHILYTLSAVQVLALF--DK-LDAIDVDRVTNYIVSLQNED 116
++ CQD +GGFAG G PH+ T ++V L DK L +I+ D++ ++ ++ +
Sbjct: 103 FLNRCQDPNGGFAGGPGQMPHLATTYASVNTLITLGGDKALASINRDKLYGFMRRMKQPN 162
Query: 117 GSFSGDTWGEVDTRFSYIAICCLSILRRLDKINVEKAVKYIISCKNMDGGFGCTPGGESH 176
G F GE+D R Y AI S+L LD ++ +I+SC+ +GG PG E+H
Sbjct: 163 GGFRMHDEGEIDVRACYTAISVASVLNILDDELIKNVGDFILSCQTYEGGIAGEPGSEAH 222
Query: 177 AGQIFCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLI 236
G FC + A+ + G + +D L W+ RQ K G GR KL D CYS+W ++
Sbjct: 223 GGYTFCGLAAMILIGEANRLDLPRLLDWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVA 282
Query: 237 MIDRVHWISKEKLIKFILDCQDTENGGISDRPDD 270
++ R+ + +E+++ + +++ SD PD+
Sbjct: 283 LLQRLQSVIEEQMV------EASQSFTKSDAPDE 310
>Medtr8g085230.1 | RAB geranylgeranyl transferase beta-subunit,
putative | LC | chr8:35278627-35279722 | 20130731
Length = 58
Score = 69.7 bits (169), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/35 (91%), Positives = 33/35 (94%)
Query: 279 FGVAGLSLLEYPGLKPIDPAYALPVDVVNRIFFSK 313
F VAGLSLLEYPG+KPIDPAYAL VDVVNRIFFSK
Sbjct: 24 FVVAGLSLLEYPGVKPIDPAYALRVDVVNRIFFSK 58